cluster # 8959

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Oryza sativa
cluster # 8959 cluster # 8959 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8959#0 length = 1446 sequences # 3

consensus_8959#1 length = 1053 sequences # 2
consensus_8959#2 length = 339 sequences # 1

consensusID : consensus_8959#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1446
fasta sequence

                              [AAGAACCATGCATCATTCAAATTTCGTTGTCGCTGCTCCTCAAAATAGAGATCAATTCAATGAAATGACTGATGAAAACACGTTCCTGAAATTCGTGCAACTACAAAGCAACATTACATGCAACTCAAATCGTTCATGCAGGGGTTTCCGATTCGGGGTTCGTTTGTCGACCACGTGTTCCCATCTGTGAAGGGCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACTTCGTCAAGCCACTCCAAAACTAAATAATGCGGGGATGTTAAACCTACCATATAGCAGATCAGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAAGATGGGGAAATTTGTATTTTAATTAATTGCATAATGGAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGTAAAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACATGAAATGAAAAAAAATCGTACATAAATAAATTTTTGTACAATAATGACAGTCAAACAATAATGATAAAATAATTAAAAACTCTTTCGATAAGTATACAATAATGACATATCATTACTCATATAATTAATAATTATAAAATAATTCAACAAACAATTCTTATTTTTAACAATTTTTGAAGTTCTAAACTAATAAACTAATATTAATGTTGTACTTCTCTTAATTTTCAATTTAGCTTGTTTTCTATTTTGTAAGATTAATTTTCATCATATTTTAAACTATGAGAATAAAATTCTTTTAAGTAAACAATAAAATTTCTATATATTCTTCTTCCCCCACACAAATTTTCTCTATCATCAACTTACAATAAAGTTTTAGAGAAAAAAAATGTGTGAAACATAGCTCCAAAAGTAATATAACAAGTTACTAACATTTTAGACACCTCCGATTTGTATATAATCACTAAAAAAAATTTCACAAGAAATTTTGGCATAACCTCCTTTCTTTCTTTAAGAAATTTTGAAGTTTGCTCAGGCTCTTTAAGAAATTTTGAAGCTTGCTCAGGCTGGAGGAGGAAGAAGACATATATAAATGGGGGATTTTTAAGTCCCGGTTGGTAAGATCCCGGAGGGCCTAACAACGTCTAACTAAAAATGATCTTTAGTCCGGTTGATAATAGTCTCGGTTTTAAATGGATCCGGGACTATTGTGAATTTCGACCGACCGACCA]

[+] EMBL CB667195             [AAGAACCATGCATCATTCAAATTTCGTTGTCGCTGCTCCTCAAAATAGAGATCAATTCAATGAAATGACTGATGAAAACACGTTCCTGAAATTCGTGCAACTACAAAGCAACATTACATGCAACTCAAATCGTTCATGCAGGGGTTTCCGATTCGGGGTTCGTTTGTCGACCACGTGTTCCCATCTGTGAAGGGCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACTTCGTCAAGCCACTCCAAAACTAAATAATGCGGGGATGTTAAACCTACCATATAGCAGATCAGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAAGATGGGGAAATTTGTATTTTAATTAATTGCATAATGGAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGTAAAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACATGAAATGAAAAAAAATCGTACATAAATAAATTTTTGTACAATAATGACAGTCAAACAATAATGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB646271             [                                                                                                                                                                                                                                                                                                                                      GGGTCTTTATTTTCTTCCACCTCTCCATAAAGAAGATGGTGAAATTTGTATTTTAATTAATTGCATAATGTAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGTAGAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACATGAAATGAAAAAAAATCGTACATAAATAAATTTTTGTACAATAATGACAGTCAAACAATAATGATAAAATAATTAAAAACTCTTTCGATAAGTATACAATAATGACATATCATTACTCATATAATTAATAATTATAAAATAATTCAACAAACAATTCTTATTTTTAACAATTTTTGAAGTTCTAAACTAATAAACTAATATTAATGTTGTACTTCTCTTAATTTTCAATTTAGCTTGTTTTCTATTTTGTAAGATTAATTTTCATCATATTTTAAACTATGAGAATAAAATTCTTTTAAGTAAACAATAAAATTTCTATATATTCTTCTTCCCCCACACA                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB667194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACATGAAATGAAAAAAAATCGTACATAAATAAATTTTTGTACAATAATGACAGTCAAACAATAATGATAAAATAATTAAAAACTCTTTCGATAAGTATACAATAATGACATATCATTACTCATATAATTAATAATTATAAAATAATTCAACAAACAATTCTTATTTTTAACAATTTTTGAAGTTCTAAACTAATAAACTAATATTAATGTTGTACTTCTCTTAATTTTCAATTTAGCTTGTTTTCTATTTTGTAAGATTAATTTTCATCATATTTTAAACTATGAGAATAAAATTCTTTTAAGTAAACAATAAAATTTCTATATATTCTTCTTCCCCCACACAAATTTTCTCTATCATCAACTTACAATAAAGTTTTAGAGAAAAAAAATGTGTGAAACATAGCTCCAAAAGTAATATAACAAGTTACTAACATTTTAGACACCTCCGATTTGTATATAATCACTAAAAAAAATTTCACAAGAAATTTTGGCATAACCTCCTTTCTTTCTTTAAGAAATTTTGAAGTTTGCTCAGGCTCTTTAAGAAATTTTGAAGCTTGCTCAGGCTGGAGGAGGAAGAAGACATATATAAATGGGGGATTTTTAAGTCCCGGTTGGTAAGATCCCGGAGGGCCTAACAACGTCTAACTAAAAATGATCTTTAGTCCGGTTGATAATAGTCTCGGTTTTAAATGGATCCGGGACTATTGTGAATTTCGACCGACCGACCA]




>consensus_8959#0
AAGAACCATGCATCATTCAAATTTCGTTGTCGCTGCTCCTCAAAATAGAGATCAATTCAA
TGAAATGACTGATGAAAACACGTTCCTGAAATTCGTGCAACTACAAAGCAACATTACATG
CAACTCAAATCGTTCATGCAGGGGTTTCCGATTCGGGGTTCGTTTGTCGACCACGTGTTC
CCATCTGTGAAGGGCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACT
TCGTCAAGCCACTCCAAAACTAAATAATGCGGGGATGTTAAACCTACCATATAGCAGATC
AGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAA
GATGGGGAAATTTGTATTTTAATTAATTGCATAATGGAAATCTTGATTTCCTTCAAATCT
AGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAAC
CCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAA
GTGGAAATGAATAGTCCTGGATGTAAAATACTCCTTCTGGTTCTTACACTTATTGCATGG
ACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACG
CCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACATG
AAATGAAAAAAAATCGTACATAAATAAATTTTTGTACAATAATGACAGTCAAACAATAAT
GATAAAATAATTAAAAACTCTTTCGATAAGTATACAATAATGACATATCATTACTCATAT
AATTAATAATTATAAAATAATTCAACAAACAATTCTTATTTTTAACAATTTTTGAAGTTC
TAAACTAATAAACTAATATTAATGTTGTACTTCTCTTAATTTTCAATTTAGCTTGTTTTC
TATTTTGTAAGATTAATTTTCATCATATTTTAAACTATGAGAATAAAATTCTTTTAAGTA
AACAATAAAATTTCTATATATTCTTCTTCCCCCACACAAATTTTCTCTATCATCAACTTA
CAATAAAGTTTTAGAGAAAAAAAATGTGTGAAACATAGCTCCAAAAGTAATATAACAAGT
TACTAACATTTTAGACACCTCCGATTTGTATATAATCACTAAAAAAAATTTCACAAGAAA
TTTTGGCATAACCTCCTTTCTTTCTTTAAGAAATTTTGAAGTTTGCTCAGGCTCTTTAAG
AAATTTTGAAGCTTGCTCAGGCTGGAGGAGGAAGAAGACATATATAAATGGGGGATTTTT
AAGTCCCGGTTGGTAAGATCCCGGAGGGCCTAACAACGTCTAACTAAAAATGATCTTTAG
TCCGGTTGATAATAGTCTCGGTTTTAAATGGATCCGGGACTATTGTGAATTTCGACCGAC
CGACCA

consensusID : consensus_8959#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1053
fasta sequence

                              [TCGTTGTCGCTGCTCATCAAAATAGAGATCAATTCAATGAAATGACTGATGAAAACACGTTCCTGAGATTCGTGCAACTACAAAGCAACATTACATGCAACTCAAATCGTTCATGCAGGTGTTTCCGATTCGGTGTTCGTTTGTCGACCACGTGTTCCCATCTGTGAAGGTCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACTTCGTCAAGCCACTCCAAAACTAGATAATGCGGTGATGTTAGACCTACCATATAGCAGATCAGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAAGATGGTGAAATTTGTATTTTAATTAATTGCATAATGTAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGTAGAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGACCCATCGAGGTCACTGCCGATCTGCCGCAATGGACGAGCTGCTCCCTCCCTGCTCACTGTCGTTGCGCCTGAGAGCATGGATCCGGAGGAGCGCCACCGCCGTCGCGCTGAGGCCGCTGCTCACCGGAGTCGCCGCCGCCTGTGCCGAGGCCATTGCCTCTCCCGCTCGACGAGGCCGAGGTCGCTACTCGTCGGGGCTGCTGCTCGCACCGGTGCTGAGGCTGTCGCCTCTCCCGCTGCTCGACGAGGCTGAGGGCGCTGCTCTCCGGGTGGTGTCACTGCCGCGGCTCGCAGGGGACGAGGCCAAGGTTGCGCTGCTCCCTCCATGGGCAGCTGCAAAAGGGGAAAAGGAAGTGGCTAGATGCAGT]

[-] EMBL AK100707             [TCGTTGTCGCTGCTCATCAAAATAGAGATCAATTCAATGAAATGACTGATGAAAACACGTTCCTGAGATTCGTGCAACTACAAAGCAACATTACATGCAACTCAAATCGTTCATGCAGGTGTTTCCGATTCGGTGTTCGTTTGTCGACCACGTGTTCCCATCTGTGAAGGTCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACTTCGTCAAGCCACTCCAAAACTAGATAATGCGGTGATGTTAGACCTACCATATAGCAGATCAGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAAGATGGTGAAATTTGTATTTTAATTAATTGCATAATGTAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGTAGAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGACCCATCGAGGTCACTGCCGATCTGCCGCAATGGACGAGCTGCTCCCTCCCTGCTCACTGTCGTTGCGCCTGAGAGCATGGATCCGGAGGAGCGCCACCGCCGTCGCGCTGAGGCCGCTGCTCACCGGAGTCGCCGCCGCCTGTGCCGAGGCCATTGCCTCTCCCGCTCGACGAGGCCGAGGTCGCTACTCGTCGGGGCTGCTGCTCGCACCGGTGCTGAGGCTGTCGCCTCTCCCGCTGCTCGACGAGGCTGAGGGCGCTGCTCTCCGGGTGGTGTCACTGCCGCGGCTCGCAGGGGACGAGGCCAAGGTTGCGCTGCTCCCTCCATGGGCAGCTGCAAAAGGGGAAAAGGAAGTGGCTAGATGCAGT]
[-] EMBL CA757238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               tttttttTGGAAATGAATAGTCCTGGATACAGAATACTCTTTCTGTTTCTTACACTTATTGTATGGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTC  AAAAAATAATACACGCCCTCGATAAACTCTTTGGACCACCGGTCAACGTACATCCATTGCCGATCCATCGAGGTCACTGCCGATCTGCCGCAATGGACGAGCTGCTCCCTCCCTGCTCACTGTCGTTGCGCCTGAGAGCATGGATCCGGAGGAGCGCCACCGCCGTCGCGCTGAGGCCGCTGCTCACCGGAGTCGCCGCCGCCTGTGCCGAGGCCATTGCCTCTCCCGCTCGACGAGGCCGAGGTCGCTACTCGTCGGGGCTGCTGCTCGCACCGGTGCTGAGGCTGTCGCCTCTCCCGCTGCTCGACGAGGCTGAGGGCGCTGCTCTCCGGGTGGTGTCACTGCCGCGGCTCGCAGGGGACGAGGCCAAGGTTGCGCTGCTCCCTCCATGGGCAGCTGCAAAAGGGGAAAAGGAAGT             ]




>consensus_8959#1
TCGTTGTCGCTGCTCATCAAAATAGAGATCAATTCAATGAAATGACTGATGAAAACACGT
TCCTGAGATTCGTGCAACTACAAAGCAACATTACATGCAACTCAAATCGTTCATGCAGGT
GTTTCCGATTCGGTGTTCGTTTGTCGACCACGTGTTCCCATCTGTGAAGGTCTCATGACC
AAAACGAGCCAGTCCCAACGTCCCAACCATGACTACTTCGTCAAGCCACTCCAAAACTAG
ATAATGCGGTGATGTTAGACCTACCATATAGCAGATCAGTGCAGATTTCACCTTGATTTT
CATGGGTCTTTATTTTCTTCAACATCACCATAAAGAAGATGGTGAAATTTGTATTTTAAT
TAATTGCATAATGTAAATCTTGATTTCCTTCAAATCTAGCGTACTGAGCCCAGTCGGGAA
TGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAACCCCTTGCTCACCGTAGGATGTCC
AACAATTATAGCTTGACATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATG
TAGAATACTCCTTCTGGTTCTTACACTTATTGCATGGACAACGAATAAAACCGTTACGCT
TGTTAGCTTCGGCCACTCTCAAAAAAAATAATACACGCCCTCGATAAACTCTCTGGACCA
CCGGTCAGCGTACATCCATTACCGACCCATCGAGGTCACTGCCGATCTGCCGCAATGGAC
GAGCTGCTCCCTCCCTGCTCACTGTCGTTGCGCCTGAGAGCATGGATCCGGAGGAGCGCC
ACCGCCGTCGCGCTGAGGCCGCTGCTCACCGGAGTCGCCGCCGCCTGTGCCGAGGCCATT
GCCTCTCCCGCTCGACGAGGCCGAGGTCGCTACTCGTCGGGGCTGCTGCTCGCACCGGTG
CTGAGGCTGTCGCCTCTCCCGCTGCTCGACGAGGCTGAGGGCGCTGCTCTCCGGGTGGTG
TCACTGCCGCGGCTCGCAGGGGACGAGGCCAAGGTTGCGCTGCTCCCTCCATGGGCAGCT
GCAAAAGGGGAAAAGGAAGTGGCTAGATGCAGT

consensusID : consensus_8959#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 339
fasta sequence

                              [GGCCTCGTCCCCTNCGAGCCGCGGCAGTGACANCACCCGGAGAGCAGCGCCCTCAGCCTCGTCGAGCAGCGGGAGAGGCGACAGCTCAGGCACCGGTGCGAGCAGCAGCCCCGACGAGTAGCGACCTCGGCCTCGTCGAGCGGGAGAGGCAATGGCCTCGGCACAGGCGGCGGCGACTCCGGTGAGCAGCGGCCTCAGCGCGACGGCGGTGGCGCTCCTCCGGATCCATGCTCTCAGGCGCAACGACAGTGAGCAGGGGAGGGAGCAAGNTCGTTCCATTGCGGCAAGATCGGNAGTGACCTGGNTGGGTCCGTTAATTTGGNTTTACGGTTTACCCNT]

[+] EMBL C73837               [GGCCTCGTCCCCTNCGAGCCGCGGCAGTGACANCACCCGGAGAGCAGCGCCCTCAGCCTCGTCGAGCAGCGGGAGAGGCGACAGCTCAGGCACCGGTGCGAGCAGCAGCCCCGACGAGTAGCGACCTCGGCCTCGTCGAGCGGGAGAGGCAATGGCCTCGGCACAGGCGGCGGCGACTCCGGTGAGCAGCGGCCTCAGCGCGACGGCGGTGGCGCTCCTCCGGATCCATGCTCTCAGGCGCAACGACAGTGAGCAGGGGAGGGAGCAAGNTCGTTCCATTGCGGCAAGATCGGNAGTGACCTGGNTGGGTCCGTTAATTTGGNTTTACGGTTTACCCNT]




>consensus_8959#2
GGCCTCGTCCCCTNCGAGCCGCGGCAGTGACANCACCCGGAGAGCAGCGCCCTCAGCCTC
GTCGAGCAGCGGGAGAGGCGACAGCTCAGGCACCGGTGCGAGCAGCAGCCCCGACGAGTA
GCGACCTCGGCCTCGTCGAGCGGGAGAGGCAATGGCCTCGGCACAGGCGGCGGCGACTCC
GGTGAGCAGCGGCCTCAGCGCGACGGCGGTGGCGCTCCTCCGGATCCATGCTCTCAGGCG
CAACGACAGTGAGCAGGGGAGGGAGCAAGNTCGTTCCATTGCGGCAAGATCGGNAGTGAC
CTGGNTGGGTCCGTTAATTTGGNTTTACGGTTTACCCNT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8959#0      AAGAACCATGCATCATTCAAATTTCGTTGTCGCTGCTCCTCAAAATAGAGATCAATTCAA 60
consensus_8959#1      -----------------------TCGTTGTCGCTGCTCATCAAAATAGAGATCAATTCAA 37
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TGAAATGACTGATGAAAACACGTTCCTGAAATTCGTGCAACTACAAAGCAACATTACATG 120
consensus_8959#1      TGAAATGACTGATGAAAACACGTTCCTGAGATTCGTGCAACTACAAAGCAACATTACATG 97
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      CAACTCAAATCGTTCATGCAGGGGTTTCCGATTCGGGGTTCGTTTGTCGACCACGTGTTC 180
consensus_8959#1      CAACTCAAATCGTTCATGCAGGTGTTTCCGATTCGGTGTTCGTTTGTCGACCACGTGTTC 157
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      CCATCTGTGAAGGGCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACT 240
consensus_8959#1      CCATCTGTGAAGGTCTCATGACCAAAACGAGCCAGTCCCAACGTCCCAACCATGACTACT 217
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TCGTCAAGCCACTCCAAAACTAAATAATGCGGGGATGTTAAACCTACCATATAGCAGATC 300
consensus_8959#1      TCGTCAAGCCACTCCAAAACTAGATAATGCGGTGATGTTAGACCTACCATATAGCAGATC 277
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      AGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAA 360
consensus_8959#1      AGTGCAGATTTCACCTTGATTTTCATGGGTCTTTATTTTCTTCAACATCACCATAAAGAA 337
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      GATGGGGAAATTTGTATTTTAATTAATTGCATAATGGAAATCTTGATTTCCTTCAAATCT 420
consensus_8959#1      GATGGTGAAATTTGTATTTTAATTAATTGCATAATGTAAATCTTGATTTCCTTCAAATCT 397
consensus_8959#2      ---------------------------------------GGCCTCGTCCCCTNCGAGCCG 21
                                                               * *  *  *** * *  * 

consensus_8959#0      AGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAAC 480
consensus_8959#1      AGCGTACTGAGCCCAGTCGGGAATGTTCTCGTCCTCCGCTTCATCTTCTTCCATTTCAAC 457
consensus_8959#2      CG-GCAGTGACANCACCCGGAGA--GCAGCGCCCTCAGCCTCGTCGAGCAGCGGGAGAGG 78
                       * * * ***   **  ***  *      ** **** ** ** **      *     *  

consensus_8959#0      CCCTTGCTCA--CCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAAC 538
consensus_8959#1      CCCTTGCTCA--CCGTAGGATGTCCAACAATTATAGCTTGACATGAACCCCGACTCAAAC 515
consensus_8959#2      CGACAGCTCAGGCACCGGTGCGAGCAGCAGCCCCGACGAGTAGCGACCTCGGCCTCGTCG 138
                      *    *****  *    *   *  ** **       *  *    ** * * * ***    

consensus_8959#0      AAGTGGAAATGAATAGTCCTGGATGTAAAATACTCCTTCTGGTTCTTACACTTATTGCAT 598
consensus_8959#1      AAGTGGAAATGAATAGTCCTGGATGTAGAATACTCCTTCTGGTTCTTACACTTATTGCAT 575
consensus_8959#2      AGCGGGAGAGGCAATGGCCTCGGCACAGGCGGCGGCGACTCCGGTGAGCAGCGGCCTCA- 197
                      *   *** * * *  * *** *    *     *  *  **        **       ** 

consensus_8959#0      GGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACA 658
consensus_8959#1      GGACAACGAATAAAACCGTTACGCTTGTTAGCTTCGGCCACTCTCAAAAAAAATAATACA 635
consensus_8959#2      GCGCGACGG------CGGTGGCGCTCCTCCGGATCCAT-GCTCTCAGGCGCAACGACA-G 249
                      *  * ***       * **  ****  *  *  **     ******     **  * *  

consensus_8959#0      CGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGATCCATCTACA 718
consensus_8959#1      CGCCCTCGATAAACTCTCTGGACCACCGGTCAGCGTACATCCATTACCGACCCATCGAGG 695
consensus_8959#2      TGAGCAGGGGAGGGAGCAAGNTCGTTCCATTGCGGCAAGATCGGNAGTGACCTGGNTGGG 309
                       *  *  *  *        *  *   *  *    * *    *   *  ** *        

consensus_8959#0      TGAAATGAAAAAAAATCGTACATAAATAAATT-TTTGTACAATAATGACAGTCAAACAAT 777
consensus_8959#1      TCAC-TGCCGATCTGCCGCA-ATGGACGAGCTGCTCCCTCCCTGCTCACTGTCGT-TGCG 752
consensus_8959#2      TC---CGTTAATTTGGNTTT-----ACGGTTTACCCNT---------------------- 339
                      *     *   *              *     *                            

consensus_8959#0      AATGATAAAATAATTAAAAACTCTTTCGATAAGTATACAATAATGACATATCATTACTCA 837
consensus_8959#1      CCTGAGAGCATGGATCCGGAGGAGCGCCACCGCCGTCGCGCTGAGGC----CGCTGCTCA 808
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TATAATTAATAATTATAAAATAATTCAACAAACAATTCTTATTTTTAACAATTTTTGAAG 897
consensus_8959#1      CCGGAGTCGCCGCCGCCTG-TGCCGAGGCCATTGCCTCTCCCGCTCGACGAGGCCGAGGT 867
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TTCTAAACTAATAAACTAATATTAATGTTGTACTTCTCTTAATTTTCAATTTAGCTTGTT 957
consensus_8959#1      CGCTACTCGTCGGGGCTGCTGCT-----CGCACCGGTGCTGAGGCTG---TCGCCTCTCC 919
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TTCTATTTTGTAAGATTAATTTTCATCATATTTTAAACTATGAGAATAAAATTCTTTTAA 1017
consensus_8959#1      CGCTGCTCGACGAGGCTGAGGG-CGCTGCTCTCCGGGTGGTGTCACTGCCGCGGCTCGCA 978
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      GTAAACAATAAAATTTCTATATATTCTTCTTCCCCCACACAAATTTTCTCTATCATCAAC 1077
consensus_8959#1      GGGGACGAGGCCA-------AGGTTGCGCTGCTCCC------------TCCATGGGCAGC 1019
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TTACAATAAAGTTTTAGAGAAAAAAAATGTGTGAAACATAGCTCCAAAAGTAATATAACA 1137
consensus_8959#1      T----GCAAAA----GGGGAAAAGGAAGTGGCTAGATGCAGT------------------ 1053
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      AGTTACTAACATTTTAGACACCTCCGATTTGTATATAATCACTAAAAAAAATTTCACAAG 1197
consensus_8959#1      ------------------------------------------------------------
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      AAATTTTGGCATAACCTCCTTTCTTTCTTTAAGAAATTTTGAAGTTTGCTCAGGCTCTTT 1257
consensus_8959#1      ------------------------------------------------------------
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      AAGAAATTTTGAAGCTTGCTCAGGCTGGAGGAGGAAGAAGACATATATAAATGGGGGATT 1317
consensus_8959#1      ------------------------------------------------------------
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TTTAAGTCCCGGTTGGTAAGATCCCGGAGGGCCTAACAACGTCTAACTAAAAATGATCTT 1377
consensus_8959#1      ------------------------------------------------------------
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      TAGTCCGGTTGATAATAGTCTCGGTTTTAAATGGATCCGGGACTATTGTGAATTTCGACC 1437
consensus_8959#1      ------------------------------------------------------------
consensus_8959#2      ------------------------------------------------------------
                                                                                  

consensus_8959#0      GACCGACCA 1446
consensus_8959#1      ---------
consensus_8959#2      ---------