cluster # 8972

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Oryza sativa
cluster # 8972 cluster # 8972 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8972#0 length = 505 sequences # 6

consensusID : consensus_8972#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 505
fasta sequence

                              [GCGGATGTCGAGTACCGCTGCTTCGTCGGCGGCCTCG-CTGGGCCACCGACGACCGCTCCCTCGAGGCCGCCTTCTCCACCTACGGCGAGATCCTCGACTCCAAGATCA-TCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCGACGNCATCGAGGGCATGAACGGCGACTCCGGC-GGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGG-CCAGTTATCCTTAGCTATCCGTGTC-AGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTT-ACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAAANCGCNAAAAAA]

[+] EMBL OSC8271              [GCGGATGTCGAGTACCGCTGCTTCGTCGGNGGCCTCG CTGGGCCACCGANGACCGCTCCCTCGANGCCGCCTTCTCCACCTANGGCGAGATCCTCGACTCCAAGATCA TCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCNTCCGAGCAGTCGATGCGCGANGNCATCGAGGGCATGAACGGCa                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU066174             [               CGCTGCTTCGTCGGCGGCCTCG CTGGGCCACCGACGACCGCTCCCTCGAGGCCGCCTTCTCCACCTACGGCGAGATCCTCGACTCCAAGATCA TCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCGANGNCATCGAGGGCATGAACGGCGACTCCGGC GGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGG CCAGTTATCCTTAGCTATCCGTGTC AGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGNTTTCTCGAGTCGAGA                                                                                                                                                                            ]
[+] EMBL AU066170             [               CGCTGCTTCGTCGGCGGCCTCG CTGGGCCACCGACGACCGCTCCCTCGAGGCCGCCTTCTCCACCTACGGCGAGATCCTCGACTCCAAGATCA TCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCGACGNCATCGAGGGCATGAACGGCGACTCCGGC GGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGG  CAGTTATCCTTAGCTATCCGTGTC AGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTNTCTCG                                                                                                                                                                                    ]
[+] EMBL AU161771             [                 CTGCTTCGTCGGCGGCCTCGCCTGGGCCACCGACGACCGCTCCCTCGAGGCCGCCTTCTCCA CTACGGCGAGATCCTCGACTCCAAGATCA TCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCGACGCCATCGAGGGCATGAACGGCGACTCCGGC GGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGG CCAGTTATCCTTAGCTATCCGTGTC AGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTT ACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAA            ]
[+] EMBL AU161774             [                            GCGGCCTCGCCTGGGCCACCGACGACCGGTCCCTCGAGGCCGCCTTCTCCA CTACGGCGAGATCCTCGACTCCAAGATCATTCAACGACAGGGAGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCGACGCCATCGAGGGCATGAACGGCGACTCCGGC GGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGG CCAGTTATCCTTAGCTATCCGTGTC AGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTT ACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAAA           ]
[+] EMBL AU184257             [                                                                                                                                                                                                                   GGCNGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCCAGTTATCCTTAGCTATCCGTGTCAAGAATCNTCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTNTTCGTCCGTGATGTTNCCCATGAATTGAGTTCGCTTTGGTTATGGNGTTTGAACTGCTTGTTGCTATCTATCGGAATNGAATNNAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAGTTTTGNTNCGCNAAAAAA]




>consensus_8972#0
GCGGATGTCGAGTACCGCTGCTTCGTCGGCGGCCTCGCTGGGCCACCGACGACCGCTCCC
TCGAGGCCGCCTTCTCCACCTACGGCGAGATCCTCGACTCCAAGATCATCAACGACAGGG
AGACGGGGAGGTCACGTGGGTTTGGCTTCGTCACCTTCTCCTCCGAGCAGTCGATGCGCG
ACGNCATCGAGGGCATGAACGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGC
CCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGT
CGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTT
AGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAA
CTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTT
CGAAAAAAAAAAAANCGCNAAAAAA

clustalw multiple alignements is not computed in this case