These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8999#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2602 fasta sequence [TCGGTGTGACCTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCCATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGATCCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGGTGATTCTTTTAAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTAACCATGCTGCTCTATTTTTTGTTTGTACATAATTGTATTGACTTGATGGTCTTAAGTCTTAACATGATATCAGATATGTTCATTTTTATACTACATGCAGTACTAAGCAAACATGGGTGCCGTGCACATCTGATTACTGATACTGACTTTAAGCTTTTTTACCTGTGCCTGTTTTCCACATCAGCTTGTCTTCTTCTGAAATTTAAGGCTGTGCAGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTAGTCATGTTAAAAAAATATTGTCTTGTTTTCATATGCTTTAATACAATGTTCTGTATTTGTGTTGATTCATTTTTTTCTTGATTCCATCATGTAAATAAAAGCATTACTAAGACCTGACATTCTTGTTAAACCATATTGACTTGCTTCATGCTCTTGATTTCATTATGCTAGAATGGGTTTAATAGCGACCTAGAATAGTGGATTCACCTCCATAGTAGTGGACTCATGGGGTTATTTGATGTGTGAAGGGAGTTTTTCTTCACATAAAATGTTGTTTTTCTTGGTTTTTAGCCCCTTGGTTGATCATGCTTGTGGCTATTGGTGCTTTTGTCTAAAATTATTTATTCTGAATCTAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTGTAAGTTCGGTGACTGTGCCTTTGAACAGATTTTCAGCTAATGATTGGAGGAATTATGCATCATATCATTTACTAGCTTTAGAGGATGGGAATATCCCACAGATCAGCGTCCCCTGGTCCACATCTTGAATGATTCAGTTAAAGATGTACATATGCCCCTGCCCCTTAACATTATCTGTGTGAAGATTTTCCATCTGACAGCTTCTTTTTCATTTTGTGCAGCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCTATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACCAGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCTGTATGCTGAAATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTATTTTTTCCCTGTTCAATACATTGTATGGGGAAACTGTAGCATCAGTTGCCCACTTGCACTTCGTCAGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAGTTTAATTTCACCATCGAATCAGATTTCAGTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGAAATGCAAAAAACAAAAAAAACGGGGTAATGCCGTTCCGTATCAAAGGGCAAATCCTCGGCCG] [+] EMBL AK072468 [TCGGTGTGACCTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCCATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGATCCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGGTGATTCTTTTAAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTAACCATGCTGCTCTATTTTTTGTTTGTACATAATTGTATTGACTTGATGGTCTTAAGTCTTAACATGATATCAGATATGTTCATTTTTATACTACATGCAGTACTAAGCAAACATGGGTGCCGTGCACATCTGATTACTGATACTGACTTTAAGCTTTTTTACCTGTGCCTGTTTTCCACATCAGCTTGTCTTCTTCTGAAATTTAAGGCTGTGCAGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTAGTCATGTTAAAAAAATATTGTCTTGTTTTCATATGCTTTAATACAATGTTCTGTATTTGTGTTGATTCATTTTTTTCTTGATTCCATCATGTAAATAAAAGCATTACTAAGACCTGACATTCTTGTTAAACCATATTGACTTGCTTCATGCTCTTGATTTCATTATGCTAGAATGGGTTTAATAGCGACCTAGAATAGTGGATTCACCTCCATAGTAGTGGACTCATGGGGTTATTTGATGTGTGAAGGGAGTTTTTCTTCACATAAAATGTTGTTTTTCTTGGTTTTTAGCCCCTTGGTTGATCATGCTTGTGGCTATTGGTGCTTTTGTCTAAAATTATTTATTCTGAATCTAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTGTAAGTTCGGTGACTGTGCCTTTGAACAGATTTTCAGCTAATGATTGGAGGAATTATGCATCATATCATTTACTAGCTTTAGAGGATGGGAATATCCCACAGATCAGCGTCCCCTGGTCCACATCTTGAATGATTCAGTTAAAGATGTACATATGCCCCTGCCCCTTAACATTATCTGTGTGAAGATTTTCCATCTGACAGCTTCTTTTTCATTTTGTGCAGCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCTATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACCAGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCTGTATGCTGAAATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTATTTTTTCCCTGTTCAATACATTGTATGGGGAAACTGTAGCATCAGTTGCCCACTTGCACTTCGTCAGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAGTTTAATTTCA ] [+] EMBL CF311067 [ TCGCTCCTATTTTTTCCCTGTTCAATACATTGTATGGGGAAACTGTAGCATCAGTTGCCCACTTGCACTTCGTCAGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAGTTTAATTTCACCATCGAATCAGATTTCAGTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGAAATGCAAAAAACAAAAAAAACGGGGTAATGCCGTTCCGTATCAAAGGGCAAATCCTCGGCCG] consensusID : consensus_8999#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1602 fasta sequence [TGCGTCGCAGCCATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGATCCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCTATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACCAGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCTGTATGCTGAAATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTATTTTTTCCCTGTTCAATACATTGTATGGGGAAACTGTAGCATCAGTTGCCCACTTGCACTTCGTCAGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAGTTTAATTTCA] [+] EMBL AK119181 [TGCGTCGCAGCCATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGATCCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCTATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACCAGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCTGTATGCTGAAATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTATTTTTTCCCTGTTCAATACATTGTATGGGGAAACTGTAGCATCAGTTGCCCACTTGCACTTCGTCAGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAGTTTAATTTCA] [+] EMBL CF323755 [ CGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTNTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCT ] [+] EMBL CF323039 [ CGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTG ] consensusID : consensus_8999#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1484 fasta sequence [CTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCCATCCGATGGCACAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGTTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTAAGTGTTTGTGTTTGCTAAAACAGTGATCATTAAGTGTAAAATGTGTGGAAAAATGTTATAGTTATCCATCGAGTCCTTAACTGTGTAATATTTTCGAGAATGGATAGAAAATCCAGCCTCTATATCCATGAATGGATATATACAGCCAAAGGTTACATGAATACTTAGATTCTAGGTCTTTTACTGAGAAACAATCACGAAAAAGAAAATGAATGGTCGAGATGCTCCGAAATT] [+] EMBL AK067466 [CTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCCATCCGATGGCACAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGTCGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAGTGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGATTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGTCTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGTTTGGGCACCGTTTGCCTCTTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGTGGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATAATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGCGATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGATATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGGTCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAATTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAGCAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAAGGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGTATTGCGTGGCATTGGTGAAACTATAGCATCAAGATCCATTCCGAAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACAACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATATGGATATCCTGACAAAAGTCTAAAGAATCTTCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATTCCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTAAGTGTTTGTGTTTGCTAAAACAGTGATCATTAAGTGTAAAATGTGTGGAAAAATGTTATAGTTATCCATCGAGTCCTTAACTGTGTAATATTTTCGAGAATGGATAGAAAATCCAGCCTCTATATCCATGAATGGATATATACAGCCAAAGGTTACATGAATACTTAGATTCTAGGTCTTTTACTGAGAAACAATCACGAAAAAGAAAATGAATGGTCGAGATGCTCCGAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8999#0 TCGGTGTGACCTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCC 60 consensus_8999#1 ------------------------------------------------TGCGTCGCAGCC 12 consensus_8999#2 ----------CTGGTGGAGGCCGTGCTCTCCGCCTTTTGGCTGCTTGATGCGTCGCAGCC 50 ************ consensus_8999#0 ATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCC 120 consensus_8999#1 ATCCGATGGCGCAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCC 72 consensus_8999#2 ATCCGATGGCACAATTGCTCGCCGCCGCCACCACCACCACCACGCCACCCTGCGGCGGCC 110 ********** ************************************************* consensus_8999#0 TCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGAT 180 consensus_8999#1 TCCTAACCGCGCGGGCCTCCGCGTCCTCTCCCGGCTGCTTCCTCCGCGCGCTGCCGAGAT 132 consensus_8999#2 TCC--------------------------------------------------------- 113 *** consensus_8999#0 CCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGT 240 consensus_8999#1 CCCGCGCCATGGCCTCCGCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGT 192 consensus_8999#2 -----------------GCCTCCGGAGCCGACGCTGCCGCTGCGGCGGTTGCTCCCCCGT 156 ******************************************* consensus_8999#0 CGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAG 300 consensus_8999#1 CGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAG 252 consensus_8999#2 CGCTGCTCGTCTTCTCAGGAGGAACCGCTTTTAATGGTGTTGTAGAAGAGCTGAAGAAAG 216 ************************************************************ consensus_8999#0 TGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGA 360 consensus_8999#1 TGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGA 312 consensus_8999#2 TGACGACTCGAGTTGCACATGTTCTTCCTGTTTCCGATGATGGTGGAAGCACAGCTGAGA 276 ************************************************************ consensus_8999#0 TTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGT 420 consensus_8999#1 TTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGT 372 consensus_8999#2 TTGTGCGAGTGCTTGGTGGACCTGCTGTGGGTGACATTAGATCAAGATGCTTGAGATTGT 336 ************************************************************ consensus_8999#0 CTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTC 480 consensus_8999#1 CTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGCTTGGGCACCGTTTGCCTC 432 consensus_8999#2 CTGATGAAAGCACTTCAGAAGCCCTTTCTGTTCGGACATTGTTTGGGCACCGTTTGCCTC 396 ***************************************** ****************** consensus_8999#0 TTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGT 540 consensus_8999#1 TTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGT 492 consensus_8999#2 TTGATCCTTCAGAAGCAAAGCTTGAGTGGTACCAGATTGTAGAAGGAGAGCACGCTTTGT 456 ************************************************************ consensus_8999#0 GGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATA 600 consensus_8999#1 GGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATA 552 consensus_8999#2 GGGATGGTGTCTCACAGCCATACAGAGAAACAATACGTGCCTTTTTAGTCTACTTCCATA 516 ************************************************************ consensus_8999#0 ATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAGGTGATTCTTTT 660 consensus_8999#1 ATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAG----------- 601 consensus_8999#2 ATGAGATACTTCGACGGTCAGCTGAAATGTTTTGCTTCACCAATGGCAG----------- 565 ************************************************* consensus_8999#0 AAGCATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGC 720 consensus_8999#1 ---CATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGC 658 consensus_8999#2 ---CATTGGGAATTTCTTTTTTGCTGGGGCACGCATATTCTTCCAGTCTCTGGATGCTGC 622 ********************************************************* consensus_8999#0 GATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGAT 780 consensus_8999#1 GATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGAT 718 consensus_8999#2 GATTTTCTTGTTCTCACGTGTGTCACAGATCCCTGCTGAAAGTCTTGTTCTTCCAGTGAT 682 ************************************************************ consensus_8999#0 ATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGG 840 consensus_8999#1 ATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGG 778 consensus_8999#2 ATCCACAAATGACAGGCTTACACTGGGATGCGAACTATGGGATGGAACTATCATCCGAGG 742 ************************************************************ consensus_8999#0 TCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAA 900 consensus_8999#1 TCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAA 838 consensus_8999#2 TCAAAATGAAATATCACATCCAAGCAATGGACGTAAAGAAGTTGTTAACAAGGATTGTAA 802 ************************************************************ consensus_8999#0 TTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAG 960 consensus_8999#1 TTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAG 898 consensus_8999#2 TTCATGTAGTGCACTTCCTTCAAGGATTAAGCGTGTCTTTTACATGTCAAGTGAAGGCAG 862 ************************************************************ consensus_8999#0 CAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAA 1020 consensus_8999#1 CAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAA 958 consensus_8999#2 CAACCTGTTGCATGAGGTATTTCCTGAAGCTAACCGTACAGTTTTGGAGCAGTTAAGTAA 922 ************************************************************ consensus_8999#0 GGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGT 1080 consensus_8999#1 GGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGT 1018 consensus_8999#2 GGTGGACTGCATTGTATATGCTATGGGATCACTCTTTACATCAGTCTGTCCATCATTGGT 982 ************************************************************ consensus_8999#0 AACCATGCTGCTCTATTTTTTGTTTGTACATAATTGTATTGACTTGATGGTCTTAAGTCT 1140 consensus_8999#1 A----------------------------------------------------------- 1019 consensus_8999#2 A----------------------------------------------------------- 983 * consensus_8999#0 TAACATGATATCAGATATGTTCATTTTTATACTACATGCAGTACTAAGCAAACATGGGTG 1200 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 CCGTGCACATCTGATTACTGATACTGACTTTAAGCTTTTTTACCTGTGCCTGTTTTCCAC 1260 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 ATCAGCTTGTCTTCTTCTGAAATTTAAGGCTGTGCAGGTATTGCGTGGCATTGGTGAAAC 1320 consensus_8999#1 ----------------------------------------TTGCGTGGCATTGGTGAAAC 1039 consensus_8999#2 ----------------------------------------TTGCGTGGCATTGGTGAAAC 1003 ******************** consensus_8999#0 TATAGCATCAAGATCCATTCCGAAGGTAGTCATGTTAAAAAAATATTGTCTTGTTTTCAT 1380 consensus_8999#1 TATAGCATCAAGATCCATTCCGAAGGTA-------------------------------- 1067 consensus_8999#2 TATAGCATCAAGATCCATTCCGAAGGTA-------------------------------- 1031 **************************** consensus_8999#0 ATGCTTTAATACAATGTTCTGTATTTGTGTTGATTCATTTTTTTCTTGATTCCATCATGT 1440 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 AAATAAAAGCATTACTAAGACCTGACATTCTTGTTAAACCATATTGACTTGCTTCATGCT 1500 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 CTTGATTTCATTATGCTAGAATGGGTTTAATAGCGACCTAGAATAGTGGATTCACCTCCA 1560 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 TAGTAGTGGACTCATGGGGTTATTTGATGTGTGAAGGGAGTTTTTCTTCACATAAAATGT 1620 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 TGTTTTTCTTGGTTTTTAGCCCCTTGGTTGATCATGCTTGTGGCTATTGGTGCTTTTGTC 1680 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 TAAAATTATTTATTCTGAATCTAGGTACTTCTTTTGAATGGGTCGCATGACAGAGAAACA 1740 consensus_8999#1 ---------------------------CTTCTTTTGAATGGGTCGCATGACAGAGAAACA 1100 consensus_8999#2 ---------------------------CTTCTTTTGAATGGGTCGCATGACAGAGAAACA 1064 ********************************* consensus_8999#0 ACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATAT 1800 consensus_8999#1 ACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATAT 1160 consensus_8999#2 ACTGGGTTGCCTGCTTCTGGCTTTGTGACTGCCATTACTGATTCTCTAAACCGTACATAT 1124 ************************************************************ consensus_8999#0 GGATATCCTGACAAAAGTCTAAAGAATCTTGTAAGTTCGGTGACTGTGCCTTTGAACAGA 1860 consensus_8999#1 GGATATCCTGACAAAAGTCTAAAGAATCTT------------------------------ 1190 consensus_8999#2 GGATATCCTGACAAAAGTCTAAAGAATCTT------------------------------ 1154 ****************************** consensus_8999#0 TTTTCAGCTAATGATTGGAGGAATTATGCATCATATCATTTACTAGCTTTAGAGGATGGG 1920 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 AATATCCCACAGATCAGCGTCCCCTGGTCCACATCTTGAATGATTCAGTTAAAGATGTAC 1980 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 ATATGCCCCTGCCCCTTAACATTATCTGTGTGAAGATTTTCCATCTGACAGCTTCTTTTT 2040 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 CATTTTGTGCAGCCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATT 2100 consensus_8999#1 ------------CCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATT 1238 consensus_8999#2 ------------CCCAAAGACTATGTGAATGCTTTATTGGTACCAAAAGGAGGCCAAATT 1202 ************************************************ consensus_8999#0 CCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCT 2160 consensus_8999#1 CCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTTACTGTGGACTCT 1298 consensus_8999#2 CCTTTGGATATAAAAAACTTGTCTTCTAAAGGAATCTTTCATGTGGTAAGTGT-----TT 1257 *********************************************** * *** * consensus_8999#0 ATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACC 2220 consensus_8999#1 ATACACGATGGAAAGACGGGCATTATTTTTGATCCGCATTCATTGATTCAAGCCCTGACC 1358 consensus_8999#2 GTGTTTGCTAAAACAGTGATCATTAAGTGTAAAATGTGTGGAAAAATGTTATAGTTATCC 1317 * * * ** * ***** * * * * * * ** * * ** consensus_8999#0 AGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCT 2280 consensus_8999#1 AGTCTAATATCGGATAGGCGTTTCGTGGAACCTGATCTTCTAACAGAAAATGTAGAGTCT 1418 consensus_8999#2 A-TCGAGTCCT---TAACTGTGTAAT--ATTTTCGAGAATGGATAGAAAATCCAGCCTCT 1371 * ** * * ** ** * * * * * ******* ** *** consensus_8999#0 GTATGC-TGAA---ATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTAT-TTTTT 2335 consensus_8999#1 GTATGC-TGAA---ATCTCAGTTCTCAAATGTTAGGTATATATCTCGCTCCTAT-TTTTT 1473 consensus_8999#2 ATATCCATGAATGGATATATACAGCCAAAGGTTACATGAATACTTAGATTCTAGGTCTTT 1431 *** * **** ** * **** **** * *** * * * *** * *** consensus_8999#0 CCCTGTTCAATACATTGTATGGGGAAACTGTAGCATC-AGTTGCCCACTTGCACTTCGTC 2394 consensus_8999#1 CCCTGTTCAATACATTGTATGGGGAAACTGTAGCATC-AGTTGCCCACTTGCACTTCGTC 1532 consensus_8999#2 TACTGAGAAACAATCACGAAAAAGAAAATGAATGGTCGAGATGCTC---CGAAATT---- 1484 *** ** * * **** ** * ** ** *** * * * ** consensus_8999#0 AGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAG 2454 consensus_8999#1 AGCTAGCTTCATTGCTTCATTCATTGAAAACAAAATATACAAAAACAATTGTGCTCATAG 1592 consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 TTTAATTTCACCATCGAATCAGATTTCAGTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAA 2514 consensus_8999#1 TTTAATTTCA-------------------------------------------------- 1602 consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 AAAAAAAAAAAAAAAAAAAAAACCGAAATGCAAAAAACAAAAAAAACGGGGTAATGCCGT 2574 consensus_8999#1 ------------------------------------------------------------ consensus_8999#2 ------------------------------------------------------------ consensus_8999#0 TCCGTATCAAAGGGCAAATCCTCGGCCG 2602 consensus_8999#1 ---------------------------- consensus_8999#2 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||