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Oryza sativa
cluster # 9000 cluster # 9000       Sequences # 6       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9000#0 length = 3307 sequences # 2  
consensus_9000#1 length = 1360 sequences # 1  
 consensus_9000#2 length = 684 sequences # 1  
consensus_9000#3 length = 595 sequences # 2  
consensusID : consensus_9000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3307
fasta sequence 
                              [AGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGCCGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGCCTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGCCGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGGTCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCAGCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGATGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCGAATCCTTCTTCTGGGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGCTCGAGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTGGATGGCAAGAGCTTGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACTTGTTCTGGAGTGATGCTAGGTCACAGGCAGCACATGATTACTATGGTCGTGATGTTATTTACTTTGACACTTCATACTTGACCGAAAAATATGATCTGCCACTTGTCTTCTTTACTGGGGTGAATAATCATGGTCAGCCTGTTTTGTTTGGTACTGGATTACTTTCAGATCTAGGTGTTGACAGTTATGTGTGGTTATTTAGGGCATTTTTTGCATGCATGAAGGGCTGCTACCCAGATGCAATAATCACTGAGCATTACAATGCTATTTTAGATGCAGTGAGAGATGTTCTCCCCCAAGTTAAACACCGCCTTTGTCTGTATCGTATTATGAAAGATGTAGCAGAGAACTTGAAAGCACATGCAGAATTCAAAACAATTAAGAAAGCACTGAAGAAAGTAACCTATGGGTCACTGAAAGCCTCAGAGTTTGAAGCTGATTGGAAGAAGATTATTCTGGAGCATGGACTTGGAGAAAATGAATGCCTTAGTTCCCTATATGAGCATCGGCAGCTATGGGCACCCGCCTATCTCAAAGGCCAATTCTGGGCAGGGATGTCAGTTTCACAGCGTGGAGAGTCTATTGTTTCATACTATGATGGGTTTGTGTACCCCAAAACTTCCCTGAAGCAATTTTTCAGTAAATATGAGATCATATTGGAGAACAAATACAAGAAAGAGTTGCAAGCTGATGAAGAATCCTCCCATAGGACTCCTTTGACTGTAACAAAGTTTTACATGGAAGAGCAGCTGGCCAAAGAATACACAATCAACATGTTCAAGAAATTTCAGGACGAGTTGAAAGCAACGATGTATTGTGATGGTATGCCAACTAAAGTTGATGGACAATTTGTCACCTTTGTGGTGAAAGAATGCTCATACATGGAAGATGGAAAGGAGAAGGAGGGAAGGAATTATGAGGTTTACTTTTGCAAGCAAGAGCTTGTTAATTGTGAATGTGAATGTGGTTTCTTTCAATTCACTGGAATCCTATGTAGACATATATTATCTGTGTTTAAGTTGCAGGAGATGTTTGAGATTCCAATAAGGTTTGTTCTTGATCGCTGGAAAAGAGACTATAAGAAATTGCATGCTGATGCGCTTTGCAAAAATGATGAAATGCTACCTGATGTGCTACCTGATGGCATAATCGAGCGTCATGATATCTTGTTTACACAGTCTCGTCAGGTGCTTAATCTAGGGTTCATATCCGAGGGTAGGTACCTTGTAGCTCTGAAGTTACTGAGACAAGCAGAAAAGACTCTTCTGGATGATGGAGATAGAGGCAGGCAGGCAGGGCTTCTCTCGTTTGAGGCTGAAGCACCTGAAAATGATGAAGGGATTTTAAGTCCTGAGTTTTCAGAGGGTGTAAAGAATTCTCAGTCAACAAATGCAAAGCGTCGAGGTCGTCCAACAAAGAAACTAATTGAATCTGATTCTGATACCGTATTACGGCCAAATAAAGAGCAGGATTTTCTACGGTCATCTTTTGTCACTGATGAGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGGTAATGTCTGTTTTGTTCTTGCATCATGCCATATGCTTCAGATTTTTTTTATGTACCTGTGAGCATTCTGGGATTATTTTTCTTTTTTACTTAGATACTTGTTTCTTTTCAGTTCAAGAAATAATCCTTATCATTTACTGGGCGAAGCTTTGTTACTTTTCAATTTTATATA]

[+] EMBL AK119319             [AGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGCCGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGCCTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGCCGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGGTCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCAGCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGATGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCGAATCCTTCTTCTGGGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGCTCGAGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTGGATGGCAAGAGCTTGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACTTGTTCTGGAGTGATGCTAGGTCACAGGCAGCACATGATTACTATGGTCGTGATGTTATTTACTTTGACACTTCATACTTGACCGAAAAATATGATCTGCCACTTGTCTTCTTTACTGGGGTGAATAATCATGGTCAGCCTGTTTTGTTTGGTACTGGATTACTTTCAGATCTAGGTGTTGACAGTTATGTGTGGTTATTTAGGGCATTTTTTGCATGCATGAAGGGCTGCTACCCAGATGCAATAATCACTGAGCATTACAATGCTATTTTAGATGCAGTGAGAGATGTTCTCCCCCAAGTTAAACACCGCCTTTGTCTGTATCGTATTATGAAAGATGTAGCAGAGAACTTGAAAGCACATGCAGAATTCAAAACAATTAAGAAAGCACTGAAGAAAGTAACCTATGGGTCACTGAAAGCCTCAGAGTTTGAAGCTGATTGGAAGAAGATTATTCTGGAGCATGGACTTGGAGAAAATGAATGCCTTAGTTCCCTATATGAGCATCGGCAGCTATGGGCACCCGCCTATCTCAAAGGCCAATTCTGGGCAGGGATGTCAGTTTCACAGCGTGGAGAGTCTATTGTTTCATACTATGATGGGTTTGTGTACCCCAAAACTTCCCTGAAGCAATTTTTCAGTAAATATGAGATCATATTGGAGAACAAATACAAGAAAGAGTTGCAAGCTGATGAAGAATCCTCCCATAGGACTCCTTTGACTGTAACAAAGTTTTACATGGAAGAGCAGCTGGCCAAAGAATACACAATCAACATGTTCAAGAAATTTCAGGACGAGTTGAAAGCAACGATGTATTGTGATGGTATGCCAACTAAAGTTGATGGACAATTTGTCACCTTTGTGGTGAAAGAATGCTCATACATGGAAGATGGAAAGGAGAAGGAGGGAAGGAATTATGAGGTTTACTTTTGCAAGCAAGAGCTTGTTAATTGTGAATGTGAATGTGGTTTCTTTCAATTCACTGGAATCCTATGTAGACATATATTATCTGTGTTTAAGTTGCAGGAGATGTTTGAGATTCCAATAAGGTTTGTTCTTGATCGCTGGAAAAGAGACTATAAGAAATTGCATGCTGATGCGCTTTGCAAAAATGATGAAATGCTACCTGATGTGCTACCTGATGGCATAATCGAGCGTCATGATATCTTGTTTACACAGTCTCGTCAGGTGCTTAATCTAGGGTTCATATCCGAGGGTAGGTACCTTGTAGCTCTGAAGTTACTGAGACAAGCAGAAAAGACTCTTCTGGATGATGGAGATAGAGGCAGGCAGGCAGGGCTTCTCTCGTTTGAGGCTGAAGCACCTGAAAATGATGAAGGGATTTTAAGTCCTGAGTTTTCAGAGGGTGTAAAGAATTCTCAGTCAACAAATGCAAAGCGTCGAGGTCGTCCAACAAAGAAACTAATTGAATCTGATTCTGATACCGTATTACGGCCAAATAAAGAGCAGGATTTTCTACGGTCATCTTTTGTCACTGATGAGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGGTAATGTCTGTTTTGTTCTTGCATCATGCCATATGCTTCAGATTTTTTTTATGTACCTGTGAGCATTCTGGGATTATTTTTCTTTTTTACTTAGATACTTGTTTCTTTTCAGTTCAAGAAATAATCCTTATCATTTACTGGGCGAAGCTTTGTTACTTTTCAATTTTATATA]
[+] EMBL CF325416             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACTTGTTCTGGAGTGATGCTAGGTCACAGGCAGCACATGATTACTATGGTCGTGATGTTATTTACTTTGACACTTCATACTTGACCGAAAAATATGATCTGCCACTTGTCTTCTTTACTGGGGTGAATAATCATGGTCAGCCTGTTTTGTTTGGTACTGGATTACTTTCAGATCTAGGTGTTGACAGTTATGTGTGGTTATTTAGGGCATTTTTTGCATGCATGAAGGGCTGCTACCCAGATGCAATAATCACTGAGCATTACAATGCTATTTTAGATGCAGTGAGAGATGTTCTCCCCCAAGTTAAACACCGCCTTTGTCTGTATCGTATTATGAAAGATGTAGCAGAGAACTTGAAAGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_9000#0
AGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGCCGCCGTCTCCTCG
AGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGCCTCCTCCCCTTCC
TTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGCCGCCGCCTCCCCA
GTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGGTCTTTTGGGGGTG
GGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCAGCTCGCGCCGAAT
TCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGATGCCTGGTGGATT
GTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCGAATCCTTCTTCTG
GGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGCTCGAGTAGATGCT
CCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAGAGGAATATGGTAG
AGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTGGATGGCAAGAGCT
TGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCCCAGGATTTGGGAG
GTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATCCTCGTCGATGACA
ATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAATGCGCCCCGGGTCG
GATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAATATGCCGCGGATT
CTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGGGTGTGCCGGAGGT
TGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGCTATCTGTCTAGAG
AATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGGCAAGATAGATGGC
TTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAATCCTCGGTGTCAC
ATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACTGCTTCAAGATCAA
AAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAA
GGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGA
ACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACT
TGTTCTGGAGTGATGCTAGGTCACAGGCAGCACATGATTACTATGGTCGTGATGTTATTT
ACTTTGACACTTCATACTTGACCGAAAAATATGATCTGCCACTTGTCTTCTTTACTGGGG
TGAATAATCATGGTCAGCCTGTTTTGTTTGGTACTGGATTACTTTCAGATCTAGGTGTTG
ACAGTTATGTGTGGTTATTTAGGGCATTTTTTGCATGCATGAAGGGCTGCTACCCAGATG
CAATAATCACTGAGCATTACAATGCTATTTTAGATGCAGTGAGAGATGTTCTCCCCCAAG
TTAAACACCGCCTTTGTCTGTATCGTATTATGAAAGATGTAGCAGAGAACTTGAAAGCAC
ATGCAGAATTCAAAACAATTAAGAAAGCACTGAAGAAAGTAACCTATGGGTCACTGAAAG
CCTCAGAGTTTGAAGCTGATTGGAAGAAGATTATTCTGGAGCATGGACTTGGAGAAAATG
AATGCCTTAGTTCCCTATATGAGCATCGGCAGCTATGGGCACCCGCCTATCTCAAAGGCC
AATTCTGGGCAGGGATGTCAGTTTCACAGCGTGGAGAGTCTATTGTTTCATACTATGATG
GGTTTGTGTACCCCAAAACTTCCCTGAAGCAATTTTTCAGTAAATATGAGATCATATTGG
AGAACAAATACAAGAAAGAGTTGCAAGCTGATGAAGAATCCTCCCATAGGACTCCTTTGA
CTGTAACAAAGTTTTACATGGAAGAGCAGCTGGCCAAAGAATACACAATCAACATGTTCA
AGAAATTTCAGGACGAGTTGAAAGCAACGATGTATTGTGATGGTATGCCAACTAAAGTTG
ATGGACAATTTGTCACCTTTGTGGTGAAAGAATGCTCATACATGGAAGATGGAAAGGAGA
AGGAGGGAAGGAATTATGAGGTTTACTTTTGCAAGCAAGAGCTTGTTAATTGTGAATGTG
AATGTGGTTTCTTTCAATTCACTGGAATCCTATGTAGACATATATTATCTGTGTTTAAGT
TGCAGGAGATGTTTGAGATTCCAATAAGGTTTGTTCTTGATCGCTGGAAAAGAGACTATA
AGAAATTGCATGCTGATGCGCTTTGCAAAAATGATGAAATGCTACCTGATGTGCTACCTG
ATGGCATAATCGAGCGTCATGATATCTTGTTTACACAGTCTCGTCAGGTGCTTAATCTAG
GGTTCATATCCGAGGGTAGGTACCTTGTAGCTCTGAAGTTACTGAGACAAGCAGAAAAGA
CTCTTCTGGATGATGGAGATAGAGGCAGGCAGGCAGGGCTTCTCTCGTTTGAGGCTGAAG
CACCTGAAAATGATGAAGGGATTTTAAGTCCTGAGTTTTCAGAGGGTGTAAAGAATTCTC
AGTCAACAAATGCAAAGCGTCGAGGTCGTCCAACAAAGAAACTAATTGAATCTGATTCTG
ATACCGTATTACGGCCAAATAAAGAGCAGGATTTTCTACGGTCATCTTTTGTCACTGATG
AGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAG
TTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATG
TTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGG
CCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATT
CAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACA
GCAGTAGAATTCTAGGTAATGTCTGTTTTGTTCTTGCATCATGCCATATGCTTCAGATTT
TTTTTATGTACCTGTGAGCATTCTGGGATTATTTTTCTTTTTTACTTAGATACTTGTTTC
TTTTCAGTTCAAGAAATAATCCTTATCATTTACTGGGCGAAGCTTTGTTACTTTTCAATT
TTATATA

consensusID : consensus_9000#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1360
fasta sequence 
                              [ATATGAGATCTCGAGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGCCGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGCCTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGCCGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGGTCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCAGCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGATGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCGAATCCTTCTTCTGGGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGCTCGGGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTGGATGGCAAGAGCTCGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACTTGTTCTGGAGTCACGGATGTTAATAAA]

[+] EMBL AK109586             [ATATGAGATCTCGAGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGCCGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGCCTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGCCGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGGTCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCAGCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGATGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCGAATCCTTCTTCTGGGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGCTCGGGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTGGATGGCAAGAGCTCGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGGCGCCTAAGGAACTTGTTCTGGAGTCACGGATGTTAATAAA]




>consensus_9000#1
ATATGAGATCTCGAGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGC
CGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGC
CTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGC
CGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGG
TCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCA
GCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGA
TGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCG
AATCCTTCTTCTGGGAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGGAGC
TCGGGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTGAAG
AGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGTTTG
GATGGCAAGAGCTCGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAATCC
CAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTGATC
CTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAGAAT
GCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAGCAA
TATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCAGGG
GTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCATGC
TATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTAAGG
CAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAACCAA
TCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAAACT
GCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGCTTT
ACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTTTTT
GGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAAGGG
CGCCTAAGGAACTTGTTCTGGAGTCACGGATGTTAATAAA

consensusID : consensus_9000#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 684
fasta sequence 
                              [CCAACAAAGAAACTGATTGAATTTGATTTTGATACCGTATTTCCGGCCAAATAGAGAGCAGGATTTTCTACGGTAATCTTTGGTCCCTGATGAGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGGTTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTTTAGATACCATGACTCCTCCGGCGCTTGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTTGTTTCCTGACTGTAAGCTGCTGTTACTGGTAATATATTTTGGCCCCAAGATGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGTGCTGCCAAAAAAAAAAAAAA]

[-] EMBL CA761530             [CCAACAAAGAAACTGATTGAATTTGATTTTGATACCGTATTTCCGGCCAAATAGAGAGCAGGATTTTCTACGGTAATCTTTGGTCCCTGATGAGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGGTTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTTTAGATACCATGACTCCTCCGGCGCTTGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTTGTTTCCTGACTGTAAGCTGCTGTTACTGGTAATATATTTTGGCCCCAAGATGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGTGCTGCCAAAAAAAAAAAAAA]




>consensus_9000#2
CCAACAAAGAAACTGATTGAATTTGATTTTGATACCGTATTTCCGGCCAAATAGAGAGCA
GGATTTTCTACGGTAATCTTTGGTCCCTGATGAGTCTAATATGATTCAAGGGGCACCCTC
AGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGGTTTGATGGAAGGAATACCTCCAAA
CCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCA
ACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAA
TCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGG
AGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTTTAGATACCATGACTCC
TCCGGCGCTTGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTAT
AAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTT
GTTTCCTGACTGTAAGCTGCTGTTACTGGTAATATATTTTGGCCCCAAGATGTACATAGC
ATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATC
GAGTGCTGCCAAAAAAAAAAAAAA

consensusID : consensus_9000#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 595
fasta sequence 
                              [AGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGACCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGATACCATGACTCCTCCGGCGCTCGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTTGTTTCCTGACTGTTAGCTGCTGTTACTGGTCATATATTTTGACCCCAAGTTGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGTGCTGCC-AAATATATTGATCGATGTTTTCCTAAAAAAAAA]

[+] EMBL CA764207             [AGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGACCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGATACCATGACTCCTCCGGCGCTCGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTTGTTTCCTGACTGTTAGCTGCTGTTACTGGTCATATATTTTGACCCCAAGTTGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGTGCTGCC AAATATATTGATCGAT                 ]
[+] EMBL BQ909137             [                                                                                                   GGATATTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGATACCATGACTCCTCCGGCGCTCGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCGGCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGTAACTTTTTTGTTGTTTCCTGACTGTTAGCTGCCGTTACTGGTCATATATTTTGACCCCAAGTTGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGTGCTGCCNAACNATATTGATCGATGTTTTCCTAAAAAAAAA]




>consensus_9000#3
AGGGGCACCCTCAGCCTCACACCTTGAAAGTCCTCACTTGGGAGTTGATTTGATGGAAGG
AATACCTCCAAACCTTTCATTTAATCATCATTTTGGTATGGATGTTAATCACCAACATCA
AGTGCCCAACCAACCGAGGATGCTCCCAAGCAATTTTCTGCAGACCCAGGCAGATTCCCA
GGGTTATGGAAATCAATGGGCTTTCCCAACATTGCAGGATAATTCAATGCTAAGAACTGC
AGCCCGAAGAGGAGTGTAGACCCTATTTTTTGGCTCTAATTACAGCAGTAGAATTCTAGA
TACCATGACTCCTCCGGCGCTCGTAATTACTACCTTAACTAACCTGAGGATACTGAGGCG
GCAGCACATTATAAGACAGGTTGGATTACTTGGTAGATGAATCCAAAGGATATCCATTGT
AACTTTTTTGTTGTTTCCTGACTGTTAGCTGCTGTTACTGGTCATATATTTTGACCCCAA
GTTGTACATAGCATTAGACATAGTCAATGTGTACATTACTCATTGCGGCAGATTGGTGAA
TCACATGATATCGAGTGCTGCCAAATATATTGATCGATGTTTTCCTAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      -------------AGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGC 47
consensus_9000#1      ATATGAGATCTCGAGTCTCGATTCTACTCTGTCTCCAATCTACGCAGCGAAAGCCGGCGC 60
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGC 107
consensus_9000#1      CGCCGTCTCCTCGAGCGCGCCGACGGCGGAGAAGACCGCAGGCACGGCGGTGTCTACGGC 120
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGC 167
consensus_9000#1      CTCCTCCCCTTCCTTCCAGACCCCCGCCACGGCCGCGCCGCGCCCCGCCCTAGCCTCCGC 180
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGG 227
consensus_9000#1      CGCCGCCTCCCCAGTCCGGCCGCCTGGCCTCTCCACGCGCGCACGGCCGGGGCGAGCAGG 240
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCA 287
consensus_9000#1      TCTTTTGGGGGTGGGCGACGCCGCCCGTGCCGCGGCCTCCTCCCACCTGAATCCATCCCA 300
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGA 347
consensus_9000#1      GCTCGCGCCGAATTCGGAGGTGTCCCGTACAATTCCTTCTGGATTTCCATCATTCCATGA 360
                                                                                  

consensus_9000#2      ----------------------------CCAACAAAGAAACTGATTGAATTTGATTTTGA 32
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCG 407
consensus_9000#1      TGCCTGGTGGATTGTAGCTGCTCGTGTTTCCACGAAAGAAGGTTTGGGGGTTTATCTCCG 420
                                                                                  

consensus_9000#2      TACCGTATTTCCGGCCAAATAGAGAGCAGGATTTTCTACGGTAATCTTTGGTCCCTGATG 92
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      AATCCTTCTTCTGG---GAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGG 464
consensus_9000#1      AATCCTTCTTCTGG---GAGGGATACTCTAATTGGTCCGGTTTGCTGCGGAAATCTGTGG 477
                                                                                  

consensus_9000#2      AGTCTAATATGATTCAAGGGGCACCCTCAGCCTCA-CACCTTGAAAGTCCTCACT---TG 148
consensus_9000#3      ----------------AGGGGCACCCTCAGCCTCA-CACCTTGAAAGTCCTCACT---TG 40
consensus_9000#0      AGCTCGAGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTG 524
consensus_9000#1      AGCTCGGGTAGATGCTCCGTGTTAGTTTCGCCACAGCGCACTGCAAATTCTAGTGGAGTG 537
                                        * *     *  *** ** * *  ** ** * **       **

consensus_9000#2      GGAGTTGGTTTGATGGAAGGAATACCTCCAAACCTTTCATT--TAATCATCATT-TTGGT 205
consensus_9000#3      GGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATT--TAATCATCATT-TTGGT 97
consensus_9000#0      AAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGT 584
consensus_9000#1      AAGAGGAATATGGTAGAGGGGTTGCCGGCGGAGTTGCCAATCGTGGACGTGGCCGCTCGT 597
                              * ** * ** **  * **  *  *  *  ** *  *   * *      * **

consensus_9000#2      ATGGATGTTAA----TCA---CCAACATCAAGTGCCCAACCAACCGAGGATGCT------ 252
consensus_9000#3      ATGGATGTTAA----TCA---CCAACATCAAGTGCCCAACCAACCGAGGATGCT------ 144
consensus_9000#0      TTGGATGGCAAGAGCTTGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAA 644
consensus_9000#1      TTGGATGGCAAGAGCTCGGAGCTGCCAGAGAATGGTGCATTGCTGAAGGGTGCTGAGGAA 657
                       ******  **    *     *   **   * **    *       *** ****      

consensus_9000#2      -CCCAAGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGT-TATGGAAATCAATGGGCT 310
consensus_9000#3      -CCCAAGCAATTTTCTGCAGACCCAGGCAGATTCCCAGGGT-TATGGAAATCAATGGGCT 202
consensus_9000#0      TCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTG 704
consensus_9000#1      TCCCAGGATTTGGGAGGTAATCCCGTGGCGGTGTTGACGTTGCACGAAGGCAAAGAGGTG 717
                       **** *   *     * *  ***  *  * *    * * *  * * *    **  **  

consensus_9000#2      TTCC----------CAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGG 360
consensus_9000#3      TTCC----------CAACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGG 252
consensus_9000#0      ATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAG 764
consensus_9000#1      ATCCTCGTCGATGACAATGATAGTGAGCAGGAAGACGGTGGGAGTGGCAAGGTGGATGAG 777
                       ***          ***   *   *   *     * * *  **   ***    * *   *

consensus_9000#2      AGTGTAGACCCTATT---TTTTGGCTCTAA--TTACA-------GCAGTAGAATTTTAGA 408
consensus_9000#3      AGTGTAGACCCTATT---TTTTGGCTCTAA--TTACA-------GCAGTAGAATTCTAGA 300
consensus_9000#0      AATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAG 824
consensus_9000#1      AATGCGCCCCGGGTCGGATTGAGATTCAAAACTTATGATGACGCGCTGAAGTACTATAAG 837
                      * **    **   *    **  *  ** **  ***         ** * ** * * **  

consensus_9000#2      TACCATGACTC---CTCCGGCGCTT--GTAATTACT---ACCTTAACTAACCTGAGGATA 460
consensus_9000#3      TACCATGACTC---CTCCGGCGCTC--GTAATTACT---ACCTTAACTAACCTGAGGATA 352
consensus_9000#0      CAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCA 884
consensus_9000#1      CAATATGCCGCGGATTCTGGCTTTTCAGCAATCATTCTGAAGTCGTCCTACTTGAAGTCA 897
                       *  *** * *    ** ***  *   * *** * *   *  *   *  ** *** *  *

consensus_9000#2      CTGAGGCGGCAGCACATTATA---------AGACAGGTTGGATTACTT--GGTAGATGAA 509
consensus_9000#3      CTGAGGCGGCAGCACATTATA---------AGACAGGTTGGATTACTT--GGTAGATGAA 401
consensus_9000#0      GGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCA 944
consensus_9000#1      GGGGTGTGCCGGAGGTTGGTGCTTGGATGCAGTCGAGCTGGAAGAGGGAGGGCAAACGCA 957
                        *  * * * *    *  *          ** *  * ****  *     ** * * * *

consensus_9000#2      T---------CCAAAGGAT-ATCCATTGTAACTTTTTTGTT----GTTTC-CTGACTGTA 554
consensus_9000#3      T---------CCAAAGGAT-ATCCATTGTAACTTTTTTGTT----GTTTC-CTGACTGTT 446
consensus_9000#0      TGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTA 1004
consensus_9000#1      TGCTATCTGTCTAGAGAATCAACGAAGATAAATTGTCCAGCTAGGATTTCGTTGAAGCTA 1017
                      *         * * ** ** * * *   *** ** *          ****  ***   * 

consensus_9000#2      AGCTGCTGTTACTGGTAATATATTT-TGGCCCCAAG-ATGTACATAGCATTAGACATAGT 612
consensus_9000#3      AGCTGCTGTTACTGGTCATATATTT-TGACCCCAAG-TTGTACATAGCATTAGACATAGT 504
consensus_9000#0      AGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAAC 1064
consensus_9000#1      AGGCAAGATAGATGGCTTCACATTGATGACGCTAAGCTTGATCACAACCATCCACCGAAC 1077
                      **      *   ***    * ***  ** * * ***  **  ** * *  *  **  *  

consensus_9000#2      CAAT-----GTGT---ACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGT 664
consensus_9000#3      CAAT-----GTGT---ACATTACTCATTGCGGCAGATTGGTGAATCACATGATATCGAGT 556
consensus_9000#0      CAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAA 1124
consensus_9000#1      CAATCCTCGGTGTCACATATGAACTGTTATAAGAAATTGACAGATGCCAAGAATGAGGAA 1137
                      ****     ****   * ** *    **     * ****    **  ** **    *   

consensus_9000#2      GCTGC--------CAAAAAAAAAAAAAA-------------------------------- 684
consensus_9000#3      GCTGC--------CAAATATATTGATCGATGTTTTCCTAAAAAAAAA------------- 595
consensus_9000#0      ACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGC 1184
consensus_9000#1      ACTGCTTCAAGATCAAAAGGGCGTAGGAATGTTCCCATAGGTGACAAAGAGCAAGGGAGC 1197
                       ****        ****       *                                   

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTT 1244
consensus_9000#1      TTTACTGAGATAGGAAGGCTTAAATTTGGGGAAGGAGATGATGAGTACATCCACAAGTTT 1257
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAA 1304
consensus_9000#1      TTTGGGAGCATGCAGAACAAGAATCCAAATTTCTTCTACTTAGTAGATTTGGACAAACAA 1317
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GGGCGCCTAAGGAACTTGTTCTGGAGTGATGCTAGGTCACAGGCAGCACATGATTACTAT 1364
consensus_9000#1      GGGCGCCTAAGGAACTTGTTCTGGAGTCACGGATGTTAATAAA----------------- 1360
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GGTCGTGATGTTATTTACTTTGACACTTCATACTTGACCGAAAAATATGATCTGCCACTT 1424
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GTCTTCTTTACTGGGGTGAATAATCATGGTCAGCCTGTTTTGTTTGGTACTGGATTACTT 1484
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TCAGATCTAGGTGTTGACAGTTATGTGTGGTTATTTAGGGCATTTTTTGCATGCATGAAG 1544
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GGCTGCTACCCAGATGCAATAATCACTGAGCATTACAATGCTATTTTAGATGCAGTGAGA 1604
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GATGTTCTCCCCCAAGTTAAACACCGCCTTTGTCTGTATCGTATTATGAAAGATGTAGCA 1664
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GAGAACTTGAAAGCACATGCAGAATTCAAAACAATTAAGAAAGCACTGAAGAAAGTAACC 1724
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TATGGGTCACTGAAAGCCTCAGAGTTTGAAGCTGATTGGAAGAAGATTATTCTGGAGCAT 1784
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GGACTTGGAGAAAATGAATGCCTTAGTTCCCTATATGAGCATCGGCAGCTATGGGCACCC 1844
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GCCTATCTCAAAGGCCAATTCTGGGCAGGGATGTCAGTTTCACAGCGTGGAGAGTCTATT 1904
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GTTTCATACTATGATGGGTTTGTGTACCCCAAAACTTCCCTGAAGCAATTTTTCAGTAAA 1964
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TATGAGATCATATTGGAGAACAAATACAAGAAAGAGTTGCAAGCTGATGAAGAATCCTCC 2024
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CATAGGACTCCTTTGACTGTAACAAAGTTTTACATGGAAGAGCAGCTGGCCAAAGAATAC 2084
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      ACAATCAACATGTTCAAGAAATTTCAGGACGAGTTGAAAGCAACGATGTATTGTGATGGT 2144
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      ATGCCAACTAAAGTTGATGGACAATTTGTCACCTTTGTGGTGAAAGAATGCTCATACATG 2204
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GAAGATGGAAAGGAGAAGGAGGGAAGGAATTATGAGGTTTACTTTTGCAAGCAAGAGCTT 2264
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GTTAATTGTGAATGTGAATGTGGTTTCTTTCAATTCACTGGAATCCTATGTAGACATATA 2324
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TTATCTGTGTTTAAGTTGCAGGAGATGTTTGAGATTCCAATAAGGTTTGTTCTTGATCGC 2384
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TGGAAAAGAGACTATAAGAAATTGCATGCTGATGCGCTTTGCAAAAATGATGAAATGCTA 2444
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CCTGATGTGCTACCTGATGGCATAATCGAGCGTCATGATATCTTGTTTACACAGTCTCGT 2504
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CAGGTGCTTAATCTAGGGTTCATATCCGAGGGTAGGTACCTTGTAGCTCTGAAGTTACTG 2564
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      AGACAAGCAGAAAAGACTCTTCTGGATGATGGAGATAGAGGCAGGCAGGCAGGGCTTCTC 2624
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TCGTTTGAGGCTGAAGCACCTGAAAATGATGAAGGGATTTTAAGTCCTGAGTTTTCAGAG 2684
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      GGTGTAAAGAATTCTCAGTCAACAAATGCAAAGCGTCGAGGTCGTCCAACAAAGAAACTA 2744
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      ATTGAATCTGATTCTGATACCGTATTACGGCCAAATAAAGAGCAGGATTTTCTACGGTCA 2804
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TCTTTTGTCACTGATGAGTCTAATATGATTCAAGGGGCACCCTCAGCCTCACACCTTGAA 2864
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      AGTCCTCACTTGGGAGTTGATTTGATGGAAGGAATACCTCCAAACCTTTCATTTAATCAT 2924
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CATTTTGGTATGGATGTTAATCACCAACATCAAGTGCCCAACCAACCGAGGATGCTCCCA 2984
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      AGCAATTTTCTGCAGGCCCAGGCAGATTCCCAGGGTTATGGAAATCAATGGGCTTTCCCA 3044
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      ACATTGCAGGATAATTCAATGCTAAGAACTGCAGCCCGAAGAGGAGTGTAGACCCTATTT 3104
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      TTTGGCTCTAATTACAGCAGTAGAATTCTAGGTAATGTCTGTTTTGTTCTTGCATCATGC 3164
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CATATGCTTCAGATTTTTTTTATGTACCTGTGAGCATTCTGGGATTATTTTTCTTTTTTA 3224
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      ------------------------------------------------------------
consensus_9000#3      ------------------------------------------------------------
consensus_9000#0      CTTAGATACTTGTTTCTTTTCAGTTCAAGAAATAATCCTTATCATTTACTGGGCGAAGCT 3284
consensus_9000#1      ------------------------------------------------------------
                                                                                  

consensus_9000#2      -----------------------
consensus_9000#3      -----------------------
consensus_9000#0      TTGTTACTTTTCAATTTTATATA 3307
consensus_9000#1      -----------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)