|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9001#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3193 fasta sequence
[CCGCCGCCGCCGCCGTCTCGTCAGCAAGCGCTGCCCGGAGAGAGAGAGAAAGAGAGACGCGCCCGCGCCATGGGGAGGCCGAAGGGCGGCGCCGCGGCGTCCTCCTCCTCGTCGAAGAAGCCCAAGGCGAAGCCGAAGCAGCGCGGCGGCGTCGACTTCAAGAAGTACAAGCACAAGGTGGGGCGGAAGCTGCCGCCGCCGAAGAATGCCACCGACACGGAGATCAAGTCCAGAGCGATCGTGCTGCCGGAGCAGAGCATGGCGTCGGAGAGGGCTGGCATGGCCGTGAACAAGCGCGGGCTCACGCTGCGGGAGCTCTTGCAGCAGACGGGCCACTACAATGCCAATGTGCGCCGAGCTGCGCTGAATGGGATAAAGGATCTTGTTGCTAAGCATCCATCAGAGCTTAAACTTCACAAGGTTGCAATTGTTGAGAAGCTACAGGAAAGAATATGTGACACTGACAAGGTGGTTCGTGAATCCTTGTTCAGTATACTGCAGTCTCTCGTCTTCCCATCTTTGAAAGAGGACAATGCAATATCGACACGCAGTACACTGTTTCTGCTGATGGCCAATATTTTGAACGGAATGACCCATCTATCCATGGATATCCAGTTAATGTCTTTCAGATTTTTGGAGCTTGTTGTTATTAATTTCCCATCCTCCTTTCCAGGATACGCTGAACAGGTCTTCAACAACTTTCTTGCTGTACTGAGCAATGACAGGATTCATCTCCAGGATAAGAGTAAACTTAACAGTGTCCTTAGTGGGCTCGGGCAGTGTCTTTCTCAGGTTGCTTATGCAACAGAAAATGGTGATGCATCAAATCGACTGGTTCATAATCTTTCTGGTAGGGAACTTTGGAAATGTACTCTTGATGAAGATAACTCAGGAAGTAGAGCATTTGCGATGTCCAATATATTAATGAAGCTTCAAAACCTCTTCCAGATTCTCGTTAATTCTGTAGAGGTCTCAGTTTCAGAACTTTTTGCAAAGTCAACTATTGATGCTCAGTCAAGTGAAGCATTATTATCAGCTCTTCACTGTCTGGATCTAATATGTAACATATGTATTCAAGAGGTAAAGAAACCTCAGATGAAATTTGGAAGATCCAAAATTCAGGTTGGACCTGAATGGTTGAAAAGTTCCGTGTTAGTATATGCAAAGAAATTGTGGGGAGTAAACCGTTCATTCCACGAAAAGGGAGATGACAGATATTATGTTTTCAATCTGAAGATTGCTGAAATATTTTTGTGCTTGAGTGCATGTATGGACAACACCATATTTCCAGCTGATGAATTTTGCCAGTTTGTATCTTCTCTACTTGCAAAGGCAAAAACACTTCGCAATAAGGATACCATGGAAAAGCATTTGAGCCCACTTATAACTTTCATACCAGATCTTGTATCCAATGCCCCAGATGACTCAAAAGGATATTTATTAGAGGCATTTGCAGATGCATTCTGGGATTGCAAGGTGGATTGCAAGCTGATTTTCCCATATTTGGATGCAGTGGGAAAAATGCTGTTTCCTGAAAAAACAGGAATATTATTTGTGGAAAATGATTCAGGCTCTGAATACCATGGTGTGTGGGTAAAAGAGCTACCTGGAATTCTACTACAATCAATTGACAAAGCCCCCTCAGTAACAAAGGTTGTTTTGGAGCTACTTCTAAGAATTGGACAGTACTTCCCCACAATGGAGTTTGGAAATCTGCGTTCCTTCATTAAGTTATTTGGTGTTAAATCATCATCAGGAACCATAGAGCTTGGTCCATTCGTTAACCTTCCACGTGATTGCCAAGAACTTGCCATTTCATGCCTTTATTACTTCTCCAACCTGCTTCCCGACACAATGGAGCTGTTGGCTTCTTGTTGCTTAAGTGATGTGCTGGAACCCACCATATTGTTTAGAATTATTGAGGTTCTACAGTCAACATACAAGGCTGGGAATTTACATATAACAGAGCAACTCAGTTTCTTGTCATTGCTAATGGCACGATTCAGAGTTCATCCTGGGTCTTTCTCTACCCAGGATAATTCCCAGAAGGGCTCAAATATGAATACTTTTAAATCATTGAACCGCCTAATTTTAAATTCTCTATCTGAAATGGGTGATGGCTCCCTGGTTCTTGAGTTAATGTGGGATAATTTATCTAAAGAGATTGCACAGATACCATCTTTACATAACATGAATGGATTGTTTAGAATTATTGTCACACTTGATGCAGGAACTTGTAAGCTCATGAACGGAGATGCTATAAAAATTATAGCTGGCTACTTGATTGATGCTGCTATGGATTTGTCTAAAACCATTGAGCTTGGCTTTCAATCTGATAGGACAAGACTATTTCAATACTTTATAAAGCCTTGCATAATCATATTTTGCCAGAACGAGAAGGTTCTTTGCTGCGCATTGGAGATGCTTAAATCTTTCGCAACAGGAGATGACCACGTGCTTTCATCTGCATCCAAGTTAAACTACCCAGGAGAGCTTTCACATCGAATTTGTGTTGTCACAACTATACTCATATTCTTATGCAATGATGGAAAACTCCATAAAAACCTTTCTTTGGGCAAATGTGTTATTAAAGGTATCCTGCAACATACAAGGCATCTCATGGATTCTAATGTTCTTGATGTAACATATGAGGACAAGCAGAAGTTAAGATTTGCATTTGAGCAACTAAAGACGAAAGCATTGCAGTTGAACTGCTGGGACAGAAGTGAGCTGGAAGGGTTTTCAAGCACCACGTAAATAGTACCAAATACTAATGGTACTGCCGTAATGTGAAACCTTACTCTGCACGGGATGAAAATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAGGATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTACCAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCCACTGGTCCATGTATCATTGTGGTACAGCGCTTGGTTTTGATGCAACAGAATTGCAGTTTAGACTACTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACATGTCCATGTAAGAATCCCGATGTAAATGTAGAAATTTTGTTTTGGAAGTTCATTTCGGGAGGCTCATGTCATTGTTTCCAC]
[+] EMBL AK119336 [CCGCCGCCGCCGCCGTCTCGTCAGCAAGCGCTGCCCGGAGAGAGAGAGAAAGAGAGACGCGCCCGCGCCATGGGGAGGCCGAAGGGCGGCGCCGCGGCGTCCTCCTCCTCGTCGAAGAAGCCCAAGGCGAAGCCGAAGCAGCGCGGCGGCGTCGACTTCAAGAAGTACAAGCACAAGGTGGGGCGGAAGCTGCCGCCGCCGAAGAATGCCACCGACACGGAGATCAAGTCCAGAGCGATCGTGCTGCCGGAGCAGAGCATGGCGTCGGAGAGGGCTGGCATGGCCGTGAACAAGCGCGGGCTCACGCTGCGGGAGCTCTTGCAGCAGACGGGCCACTACAATGCCAATGTGCGCCGAGCTGCGCTGAATGGGATAAAGGATCTTGTTGCTAAGCATCCATCAGAGCTTAAACTTCACAAGGTTGCAATTGTTGAGAAGCTACAGGAAAGAATATGTGACACTGACAAGGTGGTTCGTGAATCCTTGTTCAGTATACTGCAGTCTCTCGTCTTCCCATCTTTGAAAGAGGACAATGCAATATCGACACGCAGTACACTGTTTCTGCTGATGGCCAATATTTTGAACGGAATGACCCATCTATCCATGGATATCCAGTTAATGTCTTTCAGATTTTTGGAGCTTGTTGTTATTAATTTCCCATCCTCCTTTCCAGGATACGCTGAACAGGTCTTCAACAACTTTCTTGCTGTACTGAGCAATGACAGGATTCATCTCCAGGATAAGAGTAAACTTAACAGTGTCCTTAGTGGGCTCGGGCAGTGTCTTTCTCAGGTTGCTTATGCAACAGAAAATGGTGATGCATCAAATCGACTGGTTCATAATCTTTCTGGTAGGGAACTTTGGAAATGTACTCTTGATGAAGATAACTCAGGAAGTAGAGCATTTGCGATGTCCAATATATTAATGAAGCTTCAAAACCTCTTCCAGATTCTCGTTAATTCTGTAGAGGTCTCAGTTTCAGAACTTTTTGCAAAGTCAACTATTGATGCTCAGTCAAGTGAAGCATTATTATCAGCTCTTCACTGTCTGGATCTAATATGTAACATATGTATTCAAGAGGTAAAGAAACCTCAGATGAAATTTGGAAGATCCAAAATTCAGGTTGGACCTGAATGGTTGAAAAGTTCCGTGTTAGTATATGCAAAGAAATTGTGGGGAGTAAACCGTTCATTCCACGAAAAGGGAGATGACAGATATTATGTTTTCAATCTGAAGATTGCTGAAATATTTTTGTGCTTGAGTGCATGTATGGACAACACCATATTTCCAGCTGATGAATTTTGCCAGTTTGTATCTTCTCTACTTGCAAAGGCAAAAACACTTCGCAATAAGGATACCATGGAAAAGCATTTGAGCCCACTTATAACTTTCATACCAGATCTTGTATCCAATGCCCCAGATGACTCAAAAGGATATTTATTAGAGGCATTTGCAGATGCATTCTGGGATTGCAAGGTGGATTGCAAGCTGATTTTCCCATATTTGGATGCAGTGGGAAAAATGCTGTTTCCTGAAAAAACAGGAATATTATTTGTGGAAAATGATTCAGGCTCTGAATACCATGGTGTGTGGGTAAAAGAGCTACCTGGAATTCTACTACAATCAATTGACAAAGCCCCCTCAGTAACAAAGGTTGTTTTGGAGCTACTTCTAAGAATTGGACAGTACTTCCCCACAATGGAGTTTGGAAATCTGCGTTCCTTCATTAAGTTATTTGGTGTTAAATCATCATCAGGAACCATAGAGCTTGGTCCATTCGTTAACCTTCCACGTGATTGCCAAGAACTTGCCATTTCATGCCTTTATTACTTCTCCAACCTGCTTCCCGACACAATGGAGCTGTTGGCTTCTTGTTGCTTAAGTGATGTGCTGGAACCCACCATATTGTTTAGAATTATTGAGGTTCTACAGTCAACATACAAGGCTGGGAATTTACATATAACAGAGCAACTCAGTTTCTTGTCATTGCTAATGGCACGATTCAGAGTTCATCCTGGGTCTTTCTCTACCCAGGATAATTCCCAGAAGGGCTCAAATATGAATACTTTTAAATCATTGAACCGCCTAATTTTAAATTCTCTATCTGAAATGGGTGATGGCTCCCTGGTTCTTGAGTTAATGTGGGATAATTTATCTAAAGAGATTGCACAGATACCATCTTTACATAACATGAATGGATTGTTTAGAATTATTGTCACACTTGATGCAGGAACTTGTAAGCTCATGAACGGAGATGCTATAAAAATTATAGCTGGCTACTTGATTGATGCTGCTATGGATTTGTCTAAAACCATTGAGCTTGGCTTTCAATCTGATAGGACAAGACTATTTCAATACTTTATAAAGCCTTGCATAATCATATTTTGCCAGAACGAGAAGGTTCTTTGCTGCGCATTGGAGATGCTTAAATCTTTCGCAACAGGAGATGACCACGTGCTTTCATCTGCATCCAAGTTAAACTACCCAGGAGAGCTTTCACATCGAATTTGTGTTGTCACAACTATACTCATATTCTTATGCAATGATGGAAAACTCCATAAAAACCTTTCTTTGGGCAAATGTGTTATTAAAGGTATCCTGCAACATACAAGGCATCTCATGGATTCTAATGTTCTTGATGTAACATATGAGGACAAGCAGAAGTTAAGATTTGCATTTGAGCAACTAAAGACGAAAGCATTGCAGTTGAACTGCTGGGACAGAAGTGAGCTGGAAGGGTTTTCAAGCACCACGTAAATAGTACCAAATACTAATGGTACTGCCGTAATGTGAAACCTTACTCTGCACGGGATGAAAATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAGGATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTACCAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCCACTGGTCCATGTATCATTGTGGTACAGCGCTTGGTTTTGATGCAACAGAATTGCAGTTTAGACTACTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACATGTCCATGTAAGAATCCCGATGTAAATGTAGAAATTTTGTT ]
[-] EMBL CB628567 [ TAAACTACCCAGGAGAGCTTTCACATCGAATTTGTGTTGTCACAACTATACTCATATTCTTATGCAATGATGGAAAACTCCATAAAAACCTTTCTTTGGGCAAATGTGTTATTAAAGGTATCCTGCAACATACAAGGCATCTCATGGATTCTAATGTTCTTGATGTAACATATGAGGACAAGCAGAAGTTAAGATTTGCATTTGAGCAACTAAAGACGAAAGCATTGCAGTTGAACTGCTGGGACAGAAGTGAGCTGGAAGGGTTTTCAAGCACCACGTAAATAGTACCAAATACTAATGGTACTGCCGTAATGTGAAACCTTACTCTGCACGGGATGAAAATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAGGATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTACCAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCCACTGGTCCATGTATCATTGTGGTACAGCGCTTGGTTTTGATGCAACAGAATTGCAGTTTAGACTGCTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACGTTTCAACCTACATGTCCATGTAAGAATCCCGATGTAAATGTAGAAATTTTGTTTTGGAAGTTCATTTCGGGAGGCTCATGTCATTGTTTCCAC]
consensusID : consensus_9001#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1033 fasta sequence
[ATTTGCGCCCACTTATAACTTTCATACCAGATCTTGTATCCAATGCCCCAGATGACTCAAAAGGATATTTATTAGAGGCATTTACAGATGCATTCTGGGATTGCAAGGTGGATTGCAAGCTGATTTTCCCATATTTGGATGCAGTGGGAAAAATGCTGTTTCCTGTAGGTTCCTTCTTTGGGATACATACTAAACTTCCTTTGCTACATAACTTCTTCTCTCTTTTTTTCTTTTTTTTTTGTGGGTGACGTGTTCAGGTTATTAAGAAATAGGACTTGATGAAGAGCATGCCTAGTGAAAATTGCCTACTTGGTGCTAACACACAAATATCTTTTAGGGAGAAATGCATCTCCACATGTACATGCATTACATGCACTATTATAACTGTAAGTGCTTGAAGATTTGGGTGATGGTATGAACATCTGTAGGTTGATTTGAATTTTCAGTGTTCGAATCTGGATTCTGGAACCACATTTGATGGTGATGTTAGTTCATGTACCTGCATGAACATTGGTGGGTTGTCAAATTAGTTATTAGTTAAAAAAAAAGATGGTGAATAGTCCTTGTACCAATTTATATCACACGAAATTCCAAAATAAATCTTTAAACCGCTGTATAGAGAAACATAAAAGAGAACCTTTGTCTAATGATGAATATAGATATAATCAAACAAGGCAAAACTTGCTGTCCCCAAACACCATCCATGCTGAGATTTGAAAATTTACAGGTTGTTAAGTCACTTGGTAGATCGTATGTTCAACTTGATCCTGGAGGACTTTGCATTCCCTCCTTATTAGATGCTCAAAGCCTCAAACTAAATAGTTTTGTATATTTTATCATGCCTGAGAATTAACTCCCTACAGGTACAAACACC-AAAATGGGCTAGGGGA-CACGGGGTACCTAAGCTTTCTATTAATATTCATTTGCCTGTGGTTAGGAAAAAACAGGAATATTATTTGTGGAAAATGATTCAGGCTCTGAATACCATGGTGTGTGGGTAAAAGAGCTACCTGGAATTCTACTACAATCAATT]
[+] EMBL CB628566 [ATTTGCGCCCACTTATAACTTTCATACCAGATCTTGTATCCAATGCCCCAGATGACTCAAAAGGATATTTATTAGAGGCATTTACAGATGCATTCTGGGATTGCAAGGTGGATTGCAAGCTGATTTTCCCATATTTGGATGCAGTGGGAAAAATGCTGTTTCCTGTAGGTTCCTTCTTTGGGATACATACTAAACTTCCTTTGCTACATAACTTCTTCTCTCTTTTTTTCTTTTTTTTTTGTGGGTGACGTGTTCAGGTTATTAAGAAATAGGACTTGATGAAGAGCATGCCTAGTGAAAATTGCCTACTTGGTGCTAACACACAAATATCTTTTAGGGAGAAATGCATCTCCACATGTACATGCATTACATGCACTATTATAACTGTAAGTGCTTGAAGATTTGGGTGATGGTATGAACATCTGTAGGTTGATTTGAATTTTCAGTGTTCGAATCTGGATTCTGGAACCACATTTGATGGTGATGTTAGTTCATGTACCTGCATGAACATTGGTGGGTTGTCAAATTAGTTATTAGTTAAAAAAAAAGATGGTGAATAGTCCTTGTACCAATTTATATCACACGAAATTCCAAAATAAATCTTTAAACCGCTGTATAGAGAAACATAAAAGAGAACCTTTGTCTAATGATGAATATAGATATAATCAAACAAGGCAAAACTTGCTGTCCCCAAACACCATCCATGCTGAGATTTGAAAATTTACAGGTTGTTAAGTCACTTGGTAGATCGTATGTTCA ]
[+] EMBL CA761179 [ tTTTTTTTTTTGGGGGGGACGTGTTCAGGTTATTAAGAAATAGGACTTGATGAAGAGCATGCCTAGTGAAAATTGCCTACTTGGTGCTAACACACAAATATCTTTTAGGGAGAAATGCATCTCCACATGTACATGCATTACATGCACTATTATAACTGTAAGTGCTTGAAGATTTGGGTGATGGTATGAACATCTGTAGGTTGATTTGAATTTTCAGTGTTCGAATCTGGATTCTGGAACCACATTTGATGGTGATGTTAGTTCATGTACCTGCATGAACATTGGCGGGTTGTCAAATTAGTTATTAGTTAAAAAAAAAGATGGTGAATAGTCCTTGTACCAATTTATATCACACGAAATTCCAGAATAAATCTTTAAACCGCTGTATAGAGAAACATAAAAGAGAACCTTTGTCTAATGATGAATATAGATATAATCAAACAAGGCAAAACTTGCTGTCCCCAAACACCATCCATGCTGAGATTTGAAAATTTACAGGGTGCTAAGTCACTTGGCAGATCGCATGTTCAACTTGATCCTGGAGGACTTTGCATTCCCTCCTTATTAGATGCTCAAAGCCTCAAACTAAATAGTTTTGTATATTTTATCATGCCTGAGAATTAACTCCCTACAGGTACAAACACC AAAATGGGCTAGGGGA CACGGGGTACCTAAGC ]
[-] EMBL CA766734 [ GTGTCCAGGTTATTAAGAAATAGGACTTGATGAAGAGCATGCCTAGTGAAAATTGCCTACTTGGTGCTANCACNCAGATATCTTTTAGGNAGAAATGCATCTCCACATGTACATGCATTACATGCACTATTATACCTGTAAGTGCTTGAAGATTTGGGTGATGGTATGANCATCTGTAGGTTGATTTGAATTTTCAGTGTTCGAATCTGGATTCTGGAACCACATTTGATGGTGATGTTAGTTCATGTACCTGCATGAACATTGGTGGGTTGTCAAATTAGTTATTAGTT AAAAAAAAGATGGTGAATAGTCCTTGTACCAATTTATATCACACGAAATTCCAAAATAAATCTTTAAACCGCTGTATAGAGAAACATAAAAGAGAACCTTTGTCTAATGATGAATATAGATATAATCAAACAAGGCAAAACTTGCTGTCCCCAAACACCATCCATGCTGAGATTTGAAAATTTACAGGTTGTTAAGTCACTTGGTAGATCGTATGTTCAACTTGTTCCTGGAGGACTTTGCATT CCTCCTTATTAGATGCTCAAAGCCTCAAACTAAATAATTTTGTATATTTCATCATG CTGAGAATTACCTCCCTACAGCTACTAGCGCCAAAAATGTGCTAGTGGATAACGGCTTACATATGCTTTCTATTAATATTCATTTGCCTGTGGTTAGGAAAAAACAGGAATATTATTTGTGGAAAATGATTCAGGCTCTGAATACCATGGTGTGTGGGTAAAAGAGCTACCTGGAATTCTACTACAATCAATT]
consensusID : consensus_9001#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 384 fasta sequence
[CCGCGGACGCGTGGGATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAGGATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTACCAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCCACTGGTCCATGTATCATTGTGGTACAGCGCTTGGTTTTGATGCAACAGAATTGCAGTTTAGACTGCTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACATGTCCATGTAAGAATCCCGATGTAAATGTAGAAATTTTGTTTTGGAAGTTCATTTCGGGCCTCTAAAAAAAAAA]
[+] EMBL BM419729 [CCGCGGACGCGTGGGATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAGGATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTACCAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCCACTGGTCCATGTATCATTGTGGTACAGCGCTTGGTTTTGATGCAACAGAATTGCAGTTTAGACTGCTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACATGTCCATGTAAGAATCCCGATGTAAATGTAGAAATTTTGTTTTGGAAGTTCATTTCGGGCCTCTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9001#0 CCGCCGCCGCCGCCGTCTCGTCAGCAAGCGCTGCCCGGAGAGAGAGAGAAAGAGAGACGC 60
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GCCCGCGCCATGGGGAGGCCGAAGGGCGGCGCCGCGGCGTCCTCCTCCTCGTCGAAGAAG 120
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CCCAAGGCGAAGCCGAAGCAGCGCGGCGGCGTCGACTTCAAGAAGTACAAGCACAAGGTG 180
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GGGCGGAAGCTGCCGCCGCCGAAGAATGCCACCGACACGGAGATCAAGTCCAGAGCGATC 240
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GTGCTGCCGGAGCAGAGCATGGCGTCGGAGAGGGCTGGCATGGCCGTGAACAAGCGCGGG 300
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CTCACGCTGCGGGAGCTCTTGCAGCAGACGGGCCACTACAATGCCAATGTGCGCCGAGCT 360
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GCGCTGAATGGGATAAAGGATCTTGTTGCTAAGCATCCATCAGAGCTTAAACTTCACAAG 420
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GTTGCAATTGTTGAGAAGCTACAGGAAAGAATATGTGACACTGACAAGGTGGTTCGTGAA 480
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCCTTGTTCAGTATACTGCAGTCTCTCGTCTTCCCATCTTTGAAAGAGGACAATGCAATA 540
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCGACACGCAGTACACTGTTTCTGCTGATGGCCAATATTTTGAACGGAATGACCCATCTA 600
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCCATGGATATCCAGTTAATGTCTTTCAGATTTTTGGAGCTTGTTGTTATTAATTTCCCA 660
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCCTCCTTTCCAGGATACGCTGAACAGGTCTTCAACAACTTTCTTGCTGTACTGAGCAAT 720
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GACAGGATTCATCTCCAGGATAAGAGTAAACTTAACAGTGTCCTTAGTGGGCTCGGGCAG 780
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TGTCTTTCTCAGGTTGCTTATGCAACAGAAAATGGTGATGCATCAAATCGACTGGTTCAT 840
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 AATCTTTCTGGTAGGGAACTTTGGAAATGTACTCTTGATGAAGATAACTCAGGAAGTAGA 900
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GCATTTGCGATGTCCAATATATTAATGAAGCTTCAAAACCTCTTCCAGATTCTCGTTAAT 960
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCTGTAGAGGTCTCAGTTTCAGAACTTTTTGCAAAGTCAACTATTGATGCTCAGTCAAGT 1020
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GAAGCATTATTATCAGCTCTTCACTGTCTGGATCTAATATGTAACATATGTATTCAAGAG 1080
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GTAAAGAAACCTCAGATGAAATTTGGAAGATCCAAAATTCAGGTTGGACCTGAATGGTTG 1140
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 AAAAGTTCCGTGTTAGTATATGCAAAGAAATTGTGGGGAGTAAACCGTTCATTCCACGAA 1200
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 AAGGGAGATGACAGATATTATGTTTTCAATCTGAAGATTGCTGAAATATTTTTGTGCTTG 1260
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 AGTGCATGTATGGACAACACCATATTTCCAGCTGATGAATTTTGCCAGTTTGTATCTTCT 1320
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CTACTTGCAAAGGCAAAAACACTTCGCAATAAGGATACCATGGAAAAGCATTTGAGCCCA 1380
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CTTATAACTTTCATACCAGATCTTGTATCCAATGCCCCAGATGACTCAAAAGGATATTTA 1440
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TTAGAGGCATTTGCAGATGCATTCTGGGATTGCAAGGTGGATTGCAAGCTGATTTTCCCA 1500
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TATTTGGATGCAGTGGGAAAAATGCTGTTTCCTGAAAAAACAGGAATATTATTTGTGGAA 1560
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 AATGATTCAGGCTCTGAATACCATGGTGTGTGGGTAAAAGAGCTACCTGGAATTCTACTA 1620
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CAATCAATTGACAAAGCCCCCTCAGTAACAAAGGTTGTTTTGGAGCTACTTCTAAGAATT 1680
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GGACAGTACTTCCCCACAATGGAGTTTGGAAATCTGCGTTCCTTCATTAAGTTATTTGGT 1740
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GTTAAATCATCATCAGGAACCATAGAGCTTGGTCCATTCGTTAACCTTCCACGTGATTGC 1800
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CAAGAACTTGCCATTTCATGCCTTTATTACTTCTCCAACCTGCTTCCCGACACAATGGAG 1860
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CTGTTGGCTTCTTGTTGCTTAAGTGATGTGCTGGAACCCACCATATTGTTTAGAATTATT 1920
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GAGGTTCTACAGTCAACATACAAGGCTGGGAATTTACATATAACAGAGCAACTCAGTTTC 1980
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TTGTCATTGCTAATGGCACGATTCAGAGTTCATCCTGGGTCTTTCTCTACCCAGGATAAT 2040
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 TCCCAGAAGGGCTCAAATATGAATACTTTTAAATCATTGAACCGCCTAATTTTAAATTCT 2100
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 CTATCTGAAATGGGTGATGGCTCCCTGGTTCTTGAGTTAATGTGGGATAATTTATCTAAA 2160
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ------------------------------------------------------------
consensus_9001#0 GAGATTGCACAGATACCATCTTTACATAACATGAATGGATTGTTTAGAATTATTGTCACA 2220
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 --ATTTGCGCCCACTTATAACTTTCATACCA--GATCTTGTATCCAATGCCCCAGATG-A 55
consensus_9001#0 CTTGATGCAGGAACTTGTAAGCTCATGAACGGAGATGCTATAAAAATTATAGCTGGCTAC 2280
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 CTCAAAAGGATATTTATTAGAGGCATTTACAGATGCATTCTGGGATTGCAAGGTGGATTG 115
consensus_9001#0 TTGATTGATGCTGCTATGGATTTGTCTAAAACCATTGAGCTTGGCTTTCAATCTGATAGG 2340
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 CAAGCTGATTTTCCCATA------TTTGGATGCAGTGGGAAAAATGCTGTTTCCTGTAGG 169
consensus_9001#0 ACAAGACTATTTCAATACTTTATAAAGCCTTGCATAATCATATTTTGCCAGAACGAGAAG 2400
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 TTCCTTCT-TTGGGATACATACTAAACTTCCTTTGCTACATAACTTCTTCTCTCTTTTTT 228
consensus_9001#0 GTTCTTTGCTGCGCATTGGAGATGCTTAAATCTTTC-GCAACAGGAGATGACCACGTGCT 2459
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 TCTTTTTTTTTTGTGGGTGACGTGTTCAGGTTATTAAGAAATAGGACTTGATGAAGAGCA 288
consensus_9001#0 TTCATCTGCATCCAAGTTAAACTACCCAGGAGAGCTTTCACATCGAATTTGTGTTGTCAC 2519
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 TGCCT----AGTGAAAATTGCCTACTT-GGTGCTAACACACAAATATCTTTTAGGGAGAA 343
consensus_9001#0 AACTATACTCATATTCTTATGCAATGATGGAAAACTCCATAAAAACCTTTCTTTGGGCAA 2579
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 ATGCATCTCCACATGTACATGCA-TTACATGCACTATTATAACTGTAAGTGCTTGAAGAT 402
consensus_9001#0 ATGTGTTATTAAAGGTAT-CCTGCAACATACAAGGCATCTCATGGATTCTAATGTTCTTG 2638
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 TTGGGTGATGGTATGAACATCTGTAGGTTGATTTGAATTTTCAGTGTTCGAATCTGGATT 462
consensus_9001#0 ATGTAACATATGAGGACAAGCAGAAGTTAAGATTTGCATTTGAGCAACTAAAGACGAAAG 2698
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 CTGGAACCACATTTGAT--GGTGATGTTAGTTCATGTACCTGCATGAACATTGGTG---G 517
consensus_9001#0 CATTGCAGTTGAACTGCTGGGACAGAAGTGAGCTGGAAGGGTTTTCAAGCACCA-CGTAA 2757
consensus_9001#2 ------------------------------------------------------------
consensus_9001#1 GTTGTCAAATTAGTTATTAGTTAAAAAAAAAGATGGTGAATAGTCCTTGTACCAATTTAT 577
consensus_9001#0 ATAGTACCAAATACTAATGGTACTGCCGTAATGTGAAACCTTACTCTGCACGGGATGAAA 2817
consensus_9001#2 ---------------------------------------------CCGCGGACGCGTGGG 15
consensus_9001#1 ATCACACGAAATTCCAA-AATAAATCTTTAAACCGCTGTATAGAGAAACATAAAAGAGAA 636
*
consensus_9001#0 ATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAG 2877
consensus_9001#2 ATTTTGACGAACTGAAGGTGAAGATGGAGAGTGGACATGGTGACTGGTGAGGGGCAGAAG 75
consensus_9001#1 CCTTTGTCTAATGATGAATATAGATATA-ATCAAACAAGGCAAAACTTGCTGTCCCCAAA 695
**** * ** * **** * * *** ** * ** * * **
consensus_9001#0 GATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTAC 2937
consensus_9001#2 GATATGTGCCATCCGACCTGCGTCAGACTCCAGTATACACCTCTGCTGTTCAGCTGTTAC 135
consensus_9001#1 CAC-CATCCATGCTGAGATTTGAAAATTTACAGGTTGTTAAGTCACTTGGTAGATCGTAT 754
* * * * ** * * * * *** * ** ** * **
consensus_9001#0 CAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCC 2997
consensus_9001#2 CAACACTTTACGAAGGTGGCCGGAAAATGCATTGTTCACATGTTGGGAACGAGGTGGTCC 195
consensus_9001#1 GTTCAACTT--GATCCTGGA-GGACTTTGCATTCCCTCCTTATTAGATGCTCAAAGCCTC 811
** ** ** *** *** ****** * * ** * * * *
consensus_9001#0 A--CTGGTCCATGTATCATTGTGGTACAGCGCTTG-GTTTTGATGCAACAGAATTGCAGT 3054
consensus_9001#2 A--CTGGTCCATGTATCATTGTGGTACAGCGCTTG-GTTTTGATGCAACAGAATTGCAGT 252
consensus_9001#1 AAACTAAATAGTTTTGTAT-ATTTTATCATGCCTGAGAATTAACTCCCTACAGGTACAAA 870
* ** * * ** * ** ** ** * ** * * * * * **
consensus_9001#0 T--TAGACTACTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACA 3112
consensus_9001#2 T--TAGACTGCTCAATAGACCATAGGTTATTTCACCGAAAGGTTTACATTTCAACCTACA 310
consensus_9001#1 CACCAAAATGGGCTAGGGGACACGGGGTACCTAAGCTTTCTATTAATATTCATTTGCCTG 930
* * * * * * ** ** ** * * * ** * ***
consensus_9001#0 TGTCCATGTAAGAATCCCGATGTAAAT-GTAGAAA----TTTTGTTTTGGAAGTTCATTT 3167
consensus_9001#2 TGTCCATGTAAGAATCCCGATGTAAAT-GTAGAAA----TTTTGTTTTGGAAGTTCATTT 365
consensus_9001#1 TGGTTAGGAAAAAACAGGAATATTATTTGTGGAAAATGATTCAGGCTCTGAATACCATGG 990
** * * ** ** ** * * * ** **** ** * * *** ***
consensus_9001#0 CGGGAGGCTCATGTCATTGTTTCCAC----------------- 3193
consensus_9001#2 CGGGCCTCTAAAAAAAAAA------------------------ 384
consensus_9001#1 TGTGTGGGTAAAAGAGCTACCTGGAATTCTACTACAATCAATT 1033
* * * *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||