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Oryza sativa
cluster # 9016 cluster # 9016       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9016#0 length = 2516 sequences # 4  
consensus_9016#1 length = 720 sequences # 2  

consensusID : consensus_9016#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2516
fasta sequence
                              [CTCTCCTCTCCTCTCCTCTCCTCCACCTCCACTCTCCGCTGTCCACACGCGCCCGCGCGCGCGAGAGGCGAGAGCTCGCTCTCCCAGTCCCATCCCTGTCGCTCCCCATGTTCGCCGCGCTCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACGTCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTGTTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTAGAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTCTTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTCAGCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACTCAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGTTATGTCTTTGGCTGGTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTGAAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAATGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGATGAAAAAGTAATGCAGCTGATATCGATAGAAAAGCCTATTCTAAGTGAAGCTGTTGCTGTTATCCGCAAGGCAGCACCAATGATGGAGGAAGTTGAGCTTCTAGTTGATGCTGCTTCTCGCCTGAGTGAGCCATTTTTGTTGGTTACTGTGGGTGAATTTAATTCGGGAAAATCAACTTTTATAAATGCTCTACTTGGGAGGAAGTATCTTCAGGAAGGAGTTGTGCCCACAACAAATGAGATCATGTTGCTATCATATTCTGATGTTGACTCTGAAAGCGCAGAACGATGTGAGAGGCACCCGGATGGTCAATACATGTGCTATTTATCGGCACCCGTATTGAAGGAAATGAACCTAGTTGATACGCCTGGAACAAATGTTATTCTCCAAAGGCAGCAACGGCTTACTGAAGAATATGTGCCCCGAGCTGACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTTCTCCAGTATGTTCAGCAGTGGAAGAAGAAAGTTGTATTTGTACTAAACAAATTGGACCTTTATCGGAACAGTAACGAGCTTGAAGAGGCTACTGCATTTATCAAGGAAAATGCAAGAAAATTGCTTAACACAGAGGATGTGACATTATTTCCTGTATCTTCACGCTCTGCTCTGGAGGCCAAGCTTTTGTATTCAAAAAATGATGGAAGAGAGCATCATGGGGAAGCTTTGTTTAATGACCCTAGATGGAGAAACAGCAAGTTTTATGATCTAGAGCATTACCTATTGAGCTTCTTGGATGGATCAACAGAAAATGGGAAGGAAAGGGTCCGGCTGAAACTTGAAACGCCAATTGGAATTGCAGATCGTTTGCTAACGTCATGTCAAAGGCTTGTGAAGCTAGAATATGAAAAGGCTATTGATGACCTAACATCCATCAAGGATCTTGTTTCTGGTGCAAACAATTATGCTGTGAAGATTGAGGCTGACAGTGATTCTTGGCAAAGGCAGATTTCATCCCTTATTGCGAGAGCTAAAGGCCGAGCAATTTCGCTCATGGAATCTACACTTCAGTTGTCAAACATTGACCTTATTTTTACATACACCCTTTCAGGGGGGAAAAGCACTCCCACCAAAGTTACATCATTTTTTCAAAATGATATTCTGAGCCCTTCCCTTGATGACGCAGCAAATTTGCTAAGTGAATATTCTACATGGTTGAGTTCTACCAATGTCCGTGAAGCAAATATATATGTGGACTGCTTCCATGAGAGATGGGGTGCATTGGTTGCCCAGGAGCAAAGGATTCCGCCAGAGAAAAATGAACTTGTCAATGAAGAAGAGAAACTCTGTGTAAAGGCACTGGATGGCTTCAGTGCTAGTGCTGCTGCTAAGGTTTTTGAAGAAGAAATTCGTGAAGTGGCTTGGGGAACCTTTGGAGGGCTAGGGGTTGCTGGATTGTCAGCTTCTCTTTTGACCTCTGTTTTGACAAGTACACTTGAAGACCTTCTTGCTCTAGCTCTTTGCTCAGCTGGCGGGTTCTTTGCAATATCAAATTTTCCTACCCGTCGGAAACTTGCAGTAGAGAAGATCGGCAAGGCTGCTGAAAAACTTTCTTCTAAAGTTGACGAAGCTATTCAGCAGGATATATCCCGTAGTGCTAATCAATTAGTCCATTTTGTTGAGACTGTCAGCAAACCTTATCAAGATGCATGTCAGCAAAAGATAGATTGGCTGCAGGGTGTTCAGGGTGAGTTGTCCACTGTTGAGCGTAAGCTCCAAACTTTGAAAGTTGAAATTCAAAATCTTCATGAATCA]

[+] EMBL AK120123             [CTCTCCTCTCCTCTCCTCTCCTCCACCTCCACTCTCCGCTGTCCACACGCGCCCGCGCGCGCGAGAGGCGAGAGCTCGCTCTCCCAGTCCCATCCCTGTCGCTCCCCATGTTCGCCGCGCTCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACGTCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTGTTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTAGAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTCTTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTCAGCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACTCAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGTTATGTCTTTGGCTGGTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTGAAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAATGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGATGAAAAAGTAATGCAGCTGATATCGATAGAAAAGCCTATTCTAAGTGAAGCTGTTGCTGTTATCCGCAAGGCAGCACCAATGATGGAGGAAGTTGAGCTTCTAGTTGATGCTGCTTCTCGCCTGAGTGAGCCATTTTTGTTGGTTACTGTGGGTGAATTTAATTCGGGAAAATCAACTTTTATAAATGCTCTACTTGGGAGGAAGTATCTTCAGGAAGGAGTTGTGCCCACAACAAATGAGATCATGTTGCTATCATATTCTGATGTTGACTCTGAAAGCGCAGAACGATGTGAGAGGCACCCGGATGGTCAATACATGTGCTATTTATCGGCACCCGTATTGAAGGAAATGAACCTAGTTGATACGCCTGGAACAAATGTTATTCTCCAAAGGCAGCAACGGCTTACTGAAGAATATGTGCCCCGAGCTGACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTTCTCCAGTATGTTCAGCAGTGGAAGAAGAAAGTTGTATTTGTACTAAACAAATTGGACCTTTATCGGAACAGTAACGAGCTTGAAGAGGCTACTGCATTTATCAAGGAAAATGCAAGAAAATTGCTTAACACAGAGGATGTGACATTATTTCCTGTATCTTCACGCTCTGCTCTGGAGGCCAAGCTTTTGTATTCAAAAAATGATGGAAGAGAGCATCATGGGGAAGCTTTGTTTAATGACCCTAGATGGAGAAACAGCAAGTTTTATGATCTAGAGCATTACCTATTGAGCTTCTTGGATGGATCAACAGAAAATGGGAAGGAAAGGGTCCGGCTGAAACTTGAAACGCCAATTGGAATTGCAGATCGTTTGCTAACGTCATGTCAAAGGCTTGTGAAGCTAGAATATGAAAAGGCTATTGATGACCTAACATCCATCAAGGATCTTGTTTCTGGTGCAAACAATTATGCTGTGAAGATTGAGGCTGACAGTGATTCTTGGCAAAGGCAGATTTCATCCCTTATTGCGAGAGCTAAAGGCCGAGCAATTTCGCTCATGGAATCTACACTTCAGTTGTCAAACATTGACCTTATTTTTACATACACCCTTTCAGGGGGGAAAAGCACTCCCACCAAAGTTACATCATTTTTTCAAAATGATATTCTGAGCCCTTCCCTTGATGACGCAGCAAATTTGCTAAGTGAATATTCTACATGGTTGAGTTCTACCAATGTCCGTGAAGCAAATATATATGTGGACTGCTTCCATGAGAGATGGGGTGCATTGGTTGCCCAGGAGCAAAGGATTCCGCCAGAGAAAAATGAACTTGTCAATGAAGAAGAGAAACTCTGTGTAAAGGCACTGGATGGCTTCAGTGCTAGTGCTGCTGCTAAGGTTTTTGAAGAAGAAATTCGTGAAGTGGCTTGGGGAACCTTTGGAGGGCTAGGGGTTGCTGGATTGTCAGCTTCTCTTTTGACCTCTGTTTTGACAAGTACACTTGAAGACCTTCTTGCTCTAGCTCTTTGCTCAGCTGGCGGGTTCTTTGCAATATCAAATTTTCCTACCCGTCGGAAACTTGCAGTAGAGAAGATCGGCAAGGCTGCTGAAAAACTTTCTTCTAAAGTTGACGAAGCTATTCAGCAGGATATATCCCGTAGTGCTAATCAATTAGTCCATTTTGTTGAGACTGTCAGCAAACCTTATCAAGATGCATGTCAGCAAAAGATAGATTGGCTGCAGGGTGTTCAGGGTGAGTTGTCCACTGTTGAGCGTAAGCTCCAAACTTTGAAAGTTGAAATTCAAAATCTTCATGAATCA]
[+] EMBL CB640822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAAATAATGCAGCTGATATCGATAGAAAAGCCTATTCTAAGTGAAGCTGTTGCTGTTATCCGCAAGGCAGCACCAATGATGGAGGAAGTTGAGCTTCTAGTTGATGCTGCTTCTCGCCTGAGTGAGCCATTTTTGTTGGTTACTGTGGGTGAATTTAATTCGGGAAAATCAACTTTTATAAATGCTCTACTTGGGAGGAAGTATCTTCAAGAAAGAGTTGTGCCCACAACAAATGACATCATGTTGCTATCATATTCTGATGTTGACTCTGAAAGCGCAGAACGATGTGAGAGGCACCCGGATGGTCAATACATGTGCTATTTATCGGCACCCGTATTGAAGGAAATGAACCTAGTTGATACGCCTGGAACAAATGTTATTCTCCAAAGGCAGCAACGGCTTACTGAAGAATATGTGCCCCGAGCTGACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTTCTCCAGTATGTTCAGCAGTGGAAGAAGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA999123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCCCGAGCTGACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTTCTCCAGTATGTTCAGCAGTGGAAGAAGAAAGTTGTATTTGTACTAAACAAATTGGACCTTTATCGGAACAGTAACGAGCTTGAAGAGGCTACTGCATTTATCAAGGAAAATGCAAGAAAATTGCTTAACACAGAGGATGTGACATTATTTCCTGTATCTTCACGCTCTGCTCTGGAGGCCAAGCTTTTGTATTCAAAAAATGATGGAAGAGAGCATCATGGGGAAGCTTTGTTTAATGACCCTAGATGGAGAAACAGCAAGTTTTATGATCTAGAGCATTACCTATTGAGCTTCTTGGATGGATCAACAGAAAATGGGAAGGAAAGGGTCCGGCTGAAACTTGAAACGCCAATTGGAATTGCAGATCGTTTGCTAACGTCATGTCAAAGGCTTGTGAAGCTAGAATATGAAAAGGCTATTGATGACCTAACATCCATCAAGGATCTTGTTTCTGGTGCAAACAATTATGCTGTGAAGATTGAGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB631762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTCATCCCTTATTGCGAGAGCTAAAGGCCGAGCAATTTCGCTCATGGAATCTACACTTCAGTTGTCAAACATTGACCTTATTTTTACATACACCCTTTCAGGGGGGAAAAGCACTCCCACCAAAGTTACATCATTTTTTCAAAATGATATTCTGAGCCCTTCCCTTGATGACGCAGCAAATTTGCTAAGTGAATATTCTACATGGTTGAGTTCTACCAATGTCCGTGAAGCAAATATATATGTGGACTGCTTCCATGAGAGATGGGGTGCATTGGTTGCCCAGGAGCAAAGGATTCCGCCAGAGAAAAATGAACTTGTCAATGAAGAAGAGAAACTCTGTGTAAAGGCACTGGATGGCTTCAGTGCTAGTGCTGCTGCTAAGGTTTTTGAAGAAGAAATTCGTGAAGTGGCTTGGGGAACCTTTGGAGGGCTAGGGGTTGCTGGATTGTCAGCTTCTCTTTTGACCTCTGTTTTGACAAGTACACTTGAAGACCTTCTTGCTCTAGCTCTTTGCTCAGCTGGCGGGTTCTTTGCAATATCAAATTTTCCTACCCGTCGGAAACTTGCAGTAGAGAAGATCGGCAAGGCTGCTGAAAAACTATCTTTTAAAGTTGACGAAGCTATTCAGCAGGATATATCCCGTAGTGCTAATCAATTAGTCCATTTTGTTGAGACTGTCAGCAAACCTTATCAAGATGCATGTCAGCAAAAGATAGATTGGCTGCAGGGTGTTCAGGGTGAGTTGTCCACTGTTGAGCGTAAGCTCCAAACTTTGAAAGTTGAAATTCAAAATCTTCATGAATCA]


>consensus_9016#0 CTCTCCTCTCCTCTCCTCTCCTCCACCTCCACTCTCCGCTGTCCACACGCGCCCGCGCGC GCGAGAGGCGAGAGCTCGCTCTCCCAGTCCCATCCCTGTCGCTCCCCATGTTCGCCGCGC TCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACG TCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTG TTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTA GAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTC TTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTC AGCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACT CAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGTTATGTCTTTGGCTG GTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTG AAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAA TGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGATGAAAAAGTAA TGCAGCTGATATCGATAGAAAAGCCTATTCTAAGTGAAGCTGTTGCTGTTATCCGCAAGG CAGCACCAATGATGGAGGAAGTTGAGCTTCTAGTTGATGCTGCTTCTCGCCTGAGTGAGC CATTTTTGTTGGTTACTGTGGGTGAATTTAATTCGGGAAAATCAACTTTTATAAATGCTC TACTTGGGAGGAAGTATCTTCAGGAAGGAGTTGTGCCCACAACAAATGAGATCATGTTGC TATCATATTCTGATGTTGACTCTGAAAGCGCAGAACGATGTGAGAGGCACCCGGATGGTC AATACATGTGCTATTTATCGGCACCCGTATTGAAGGAAATGAACCTAGTTGATACGCCTG GAACAAATGTTATTCTCCAAAGGCAGCAACGGCTTACTGAAGAATATGTGCCCCGAGCTG ACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTTC TCCAGTATGTTCAGCAGTGGAAGAAGAAAGTTGTATTTGTACTAAACAAATTGGACCTTT ATCGGAACAGTAACGAGCTTGAAGAGGCTACTGCATTTATCAAGGAAAATGCAAGAAAAT TGCTTAACACAGAGGATGTGACATTATTTCCTGTATCTTCACGCTCTGCTCTGGAGGCCA AGCTTTTGTATTCAAAAAATGATGGAAGAGAGCATCATGGGGAAGCTTTGTTTAATGACC CTAGATGGAGAAACAGCAAGTTTTATGATCTAGAGCATTACCTATTGAGCTTCTTGGATG GATCAACAGAAAATGGGAAGGAAAGGGTCCGGCTGAAACTTGAAACGCCAATTGGAATTG CAGATCGTTTGCTAACGTCATGTCAAAGGCTTGTGAAGCTAGAATATGAAAAGGCTATTG ATGACCTAACATCCATCAAGGATCTTGTTTCTGGTGCAAACAATTATGCTGTGAAGATTG AGGCTGACAGTGATTCTTGGCAAAGGCAGATTTCATCCCTTATTGCGAGAGCTAAAGGCC GAGCAATTTCGCTCATGGAATCTACACTTCAGTTGTCAAACATTGACCTTATTTTTACAT ACACCCTTTCAGGGGGGAAAAGCACTCCCACCAAAGTTACATCATTTTTTCAAAATGATA TTCTGAGCCCTTCCCTTGATGACGCAGCAAATTTGCTAAGTGAATATTCTACATGGTTGA GTTCTACCAATGTCCGTGAAGCAAATATATATGTGGACTGCTTCCATGAGAGATGGGGTG CATTGGTTGCCCAGGAGCAAAGGATTCCGCCAGAGAAAAATGAACTTGTCAATGAAGAAG AGAAACTCTGTGTAAAGGCACTGGATGGCTTCAGTGCTAGTGCTGCTGCTAAGGTTTTTG AAGAAGAAATTCGTGAAGTGGCTTGGGGAACCTTTGGAGGGCTAGGGGTTGCTGGATTGT CAGCTTCTCTTTTGACCTCTGTTTTGACAAGTACACTTGAAGACCTTCTTGCTCTAGCTC TTTGCTCAGCTGGCGGGTTCTTTGCAATATCAAATTTTCCTACCCGTCGGAAACTTGCAG TAGAGAAGATCGGCAAGGCTGCTGAAAAACTTTCTTCTAAAGTTGACGAAGCTATTCAGC AGGATATATCCCGTAGTGCTAATCAATTAGTCCATTTTGTTGAGACTGTCAGCAAACCTT ATCAAGATGCATGTCAGCAAAAGATAGATTGGCTGCAGGGTGTTCAGGGTGAGTTGTCCA CTGTTGAGCGTAAGCTCCAAACTTTGAAAGTTGAAATTCAAAATCTTCATGAATCA



consensusID : consensus_9016#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 720
fasta sequence
                              [GATCGTCGTGCTCGAGGCCGGGGAGGAGGGCGGCGGGCGCGTCTACGAGGCCGCGCTCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACGTCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTGTTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTAGAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTCTTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTCATCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACTCAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGCTATGTCTTTGGCTGGTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTGAAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAATGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGGATGAGAAAGTAATGCTCCTGATATCGATAGATAAGCCTATTCTAAGTGAAGCTGTTGCTGCTATCCGCAAGGCAG]

[+] EMBL CF325884             [GATCGTCGTGCTCGAGGCCGGGGAGGAGGGCGGCGGGCGCGTCTACGAGGCCGCGCTCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB631761             [             GAGGCCGGCGAGGAGGGCGGCGGGCGCGTCTACGAGGCCGCGCTCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACGTCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTGTTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTAGAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTCTTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTCATCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACTCAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGCTATGTCTTTGGCTGGTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTGAAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAATGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGGATGAGAAAGTAATGCTCCTGATATCGATAGATAAGCCTATTCTAAGTGAAGCTGTTGCTGCTATCCGCAAGGCAG]


>consensus_9016#1 GATCGTCGTGCTCGAGGCCGGGGAGGAGGGCGGCGGGCGCGTCTACGAGGCCGCGCTCTC GCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACGTCGC CTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTGTTGC AAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTAGAAC CATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTCTTAT CATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTCATCA TGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACTCAGA TAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGCTATGTCTTTGGCTGGTAT TCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTGAAAG TGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAATGGT CCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGGATGAGAAAGTAATGC TCCTGATATCGATAGATAAGCCTATTCTAAGTGAAGCTGTTGCTGCTATCCGCAAGGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9016#0      CTCTCCTCTCCTCTCCTCTCCTCCACCTCCACTCTCCGCTGTCCACACGCGCCCGCGCGC 60
consensus_9016#1      --------------------------------------------------GATCGT-CGT 9
                                                                        *  **  ** 

consensus_9016#0      GCGAGAGGCGAGAGCTCGCTCTCCCAGTCCCATCCCTGTCGCTCCCCATGTTCGCCGCGC 120
consensus_9016#1      GCTCGAGGCCGGGGAGGAGGGCGGCGGGCGCGTCTACGAGGC-------------CGCGC 56
                      **  *****  * *          * * * * **   *  **             *****

consensus_9016#0      TCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACG 180
consensus_9016#1      TCTCGCTCAAGGCGTCGGTCGGGGACCGCGCCTACCTGCTCGTCGCGGAGCGCGTCGACG 116
                      ************************************************************

consensus_9016#0      TCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTG 240
consensus_9016#1      TCGCCTCGGCGGTCGGTGCCAGCGGCGTCGTGCTGGCTGACGACGGTATTCCTGCTATTG 176
                      ************************************************************

consensus_9016#0      TTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTA 300
consensus_9016#1      TTGCAAGGAGTATGATGATGAAGTCCAACTCGGACTCCATATACCTCCCTCTTGTCGCTA 236
                      ************************************************************

consensus_9016#0      GAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTC 360
consensus_9016#1      GAACCATACGTTCTGCAGACACTGCAAGAAGCGCCACAAGTTCAGAGGGGGCTGATTTTC 296
                      ************************************************************

consensus_9016#0      TTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTC 420
consensus_9016#1      TTATCATCGATACCGGCAGTGATGATGCTATTAATGTTATGAATGGTGTTAGTGGCACTC 356
                      ************************************************************

consensus_9016#0      AGCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACT 480
consensus_9016#1      ATCATGTGAAGATCCCCATTTTTTCCACTTTGAGTGATTCGCAAAGTGAAGGGTCTTACT 416
                      * **********************************************************

consensus_9016#0      CAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGTTATGTCTTTGGCTG 540
consensus_9016#1      CAGATAACACATCCAGGTTGCTCCAATCCGGTGCATCTGGAATTGCTATGTCTTTGGCTG 476
                      ********************************************* **************

consensus_9016#0      GTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTG 600
consensus_9016#1      GTATTCAAGTACTCGCTGATGATATTATAGAACGGGATTTTTCAAAAGTGGATACCGCTG 536
                      ************************************************************

consensus_9016#0      AAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAA 660
consensus_9016#1      AAAGTGTCCTACAGGCTAATTACTCTTCAGCTAGTACTTTGGAAGAAGCAGATAATGTAA 596
                      ************************************************************

consensus_9016#0      TGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAG-ATGAAAAAGTA 719
consensus_9016#1      TGGTCCTAACTCGTGAGAAGGCAAAAGTTGCTGGATTCACAAAACTAGGATGAGAAAGTA 656
                      ************************************************ **** ******

consensus_9016#0      ATGCAGCTGATATCGATAGAAAAGCCTATTCTAAGTGAAGCTGTTGCTGTTATCCGCAAG 779
consensus_9016#1      ATGCTCCTGATATCGATAGATAAGCCTATTCTAAGTGAAGCTGTTGCTGCTATCCGCAAG 716
                      ****  ************** **************************** **********

consensus_9016#0      GCAGCACCAATGATGGAGGAAGTTGAGCTTCTAGTTGATGCTGCTTCTCGCCTGAGTGAG 839
consensus_9016#1      GCAG-------------------------------------------------------- 720
                      ****                                                        

consensus_9016#0      CCATTTTTGTTGGTTACTGTGGGTGAATTTAATTCGGGAAAATCAACTTTTATAAATGCT 899
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CTACTTGGGAGGAAGTATCTTCAGGAAGGAGTTGTGCCCACAACAAATGAGATCATGTTG 959
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CTATCATATTCTGATGTTGACTCTGAAAGCGCAGAACGATGTGAGAGGCACCCGGATGGT 1019
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CAATACATGTGCTATTTATCGGCACCCGTATTGAAGGAAATGAACCTAGTTGATACGCCT 1079
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GGAACAAATGTTATTCTCCAAAGGCAGCAACGGCTTACTGAAGAATATGTGCCCCGAGCT 1139
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GACCTAATACTCTTTGTTCTTTCATCAGACAGACCATTGACTGACAGTGAGGTCGGATTT 1199
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CTCCAGTATGTTCAGCAGTGGAAGAAGAAAGTTGTATTTGTACTAAACAAATTGGACCTT 1259
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      TATCGGAACAGTAACGAGCTTGAAGAGGCTACTGCATTTATCAAGGAAAATGCAAGAAAA 1319
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      TTGCTTAACACAGAGGATGTGACATTATTTCCTGTATCTTCACGCTCTGCTCTGGAGGCC 1379
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      AAGCTTTTGTATTCAAAAAATGATGGAAGAGAGCATCATGGGGAAGCTTTGTTTAATGAC 1439
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CCTAGATGGAGAAACAGCAAGTTTTATGATCTAGAGCATTACCTATTGAGCTTCTTGGAT 1499
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GGATCAACAGAAAATGGGAAGGAAAGGGTCCGGCTGAAACTTGAAACGCCAATTGGAATT 1559
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GCAGATCGTTTGCTAACGTCATGTCAAAGGCTTGTGAAGCTAGAATATGAAAAGGCTATT 1619
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GATGACCTAACATCCATCAAGGATCTTGTTTCTGGTGCAAACAATTATGCTGTGAAGATT 1679
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GAGGCTGACAGTGATTCTTGGCAAAGGCAGATTTCATCCCTTATTGCGAGAGCTAAAGGC 1739
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CGAGCAATTTCGCTCATGGAATCTACACTTCAGTTGTCAAACATTGACCTTATTTTTACA 1799
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      TACACCCTTTCAGGGGGGAAAAGCACTCCCACCAAAGTTACATCATTTTTTCAAAATGAT 1859
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      ATTCTGAGCCCTTCCCTTGATGACGCAGCAAATTTGCTAAGTGAATATTCTACATGGTTG 1919
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      AGTTCTACCAATGTCCGTGAAGCAAATATATATGTGGACTGCTTCCATGAGAGATGGGGT 1979
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GCATTGGTTGCCCAGGAGCAAAGGATTCCGCCAGAGAAAAATGAACTTGTCAATGAAGAA 2039
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GAGAAACTCTGTGTAAAGGCACTGGATGGCTTCAGTGCTAGTGCTGCTGCTAAGGTTTTT 2099
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GAAGAAGAAATTCGTGAAGTGGCTTGGGGAACCTTTGGAGGGCTAGGGGTTGCTGGATTG 2159
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      TCAGCTTCTCTTTTGACCTCTGTTTTGACAAGTACACTTGAAGACCTTCTTGCTCTAGCT 2219
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CTTTGCTCAGCTGGCGGGTTCTTTGCAATATCAAATTTTCCTACCCGTCGGAAACTTGCA 2279
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      GTAGAGAAGATCGGCAAGGCTGCTGAAAAACTTTCTTCTAAAGTTGACGAAGCTATTCAG 2339
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      CAGGATATATCCCGTAGTGCTAATCAATTAGTCCATTTTGTTGAGACTGTCAGCAAACCT 2399
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      TATCAAGATGCATGTCAGCAAAAGATAGATTGGCTGCAGGGTGTTCAGGGTGAGTTGTCC 2459
consensus_9016#1      ------------------------------------------------------------
                                                                                  

consensus_9016#0      ACTGTTGAGCGTAAGCTCCAAACTTTGAAAGTTGAAATTCAAAATCTTCATGAATCA 2516
consensus_9016#1      ---------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)