These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9021#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1871 fasta sequence [CGCACACGCATCCCGACGCCGCCGCGAGGCCGCGGCCGCCGCCGGCGACGATGGATCTCCCGCCGCTCTCCCACCAGGCGCTCTTCGCCGCCGTCCGATCCGCGGACGCCGCCGCCGTCGCCGGCCTCCTGGCCGACGCCGGGGCGTCCGGGCCCACCACCCAGGCGCTCGCCGCCGCGCAGACGGACGCCGGGGAGACGGCGCTGTACGTCGCGGCGGAGGCCGGCTCCGAGGAGATCGTCCGCCTCCTCATCCCGCTCTACGACCTCGAGGCCGCCACCGTCCGCTCCCGCCTCGACCTCGACGCCTTCCACGTCGCCGCCAAGCAAGGCCACACCGGGGCTGTGAAGGAGTTCTTGGGGCGGTGGCCGGAGCTATGTTCAATCTGTGACTCTTCCAATACTAGCCCTCTTTACTCTGCAGCAGTAAAAGATCACTTGGATGTAGTTAACGCCATACTGGACACTGATGACAGCTGCATAAGGATTGTGCGGAAAAATGGGAAGACATCACTACACACTGCTGCAAGAATCGGTTACCATCGTATTGTCAAAGCACTTATAGAAAGGGATCCGGGGATTGTTCCAATCAGAGATAGGAAGGGACAGACTGCACTTCACATGGCTGTAAAAGGTAAAAATACAGATGTAGTTGAAGAGTTACTGATGGCTGATGTTTCCATACTCGATGTGCGTGACAAGAAGGCAAATACAGCTTTGCACATAGCTACACGAAAATGGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA-ACAATGAAGAGCACCTATGCAGTTTGAAGCTAAGGTTACAA] [+] EMBL AK120217 [CGCACACGCATCCCGACGCCGCCGCGAGGCCGCGGCCGCCGCCGGCGACGATGGATCTCCCGCCGCTCTCCCACCAGGCGCTCTTCGCCGCCGTCCGATCCGCGGACGCCGCCGCCGTCGCCGGCCTCCTGGCCGACGCCGGGGCGTCCGGGCCCACCACCCAGGCGCTCGCCGCCGCGCAGACGGACGCCGGGGAGACGGCGCTGTACGTCGCGGCGGAGGCCGGCTCCGAGGAGATCGTCCGCCTCCTCATCCCGCTCTACGACCTCGAGGCCGCCACCGTCCGCTCCCGCCTCGACCTCGACGCCTTCCACGTCGCCGCCAAGCAAGGCCACACCGGGGCTGTGAAGGAGTTCTTGGGGCGGTGGCCGGAGCTATGTTCAATCTGTGACTCTTCCAATACTAGCCCTCTTTACTCTGCAGCAGTAAAAGATCACTTGGATGTAGTTAACGCCATACTGGACACTGATGACAGCTGCATAAGGATTGTGCGGAAAAATGGGAAGACATCACTACACACTGCTGCAAGAATCGGTTACCATCGTATTGTCAAAGCACTTATAGAAAGGGATCCGGGGATTGTTCCAATCAGAGATAGGAAGGGACAGACTGCACTTCACATGGCTGTAAAAGGTAAAAATACAGATGTAGTTGAAGAGTTACTGATGGCTGATGTTTCCATACTCGATGTGCGTGACAAGAAGGCAAATACAGCTTTGCACATAGCTACACGAAAATGGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA ACAATGAAGAGCACCTATGCAGTTTGAAGCTATGGTTAC ] [+] EMBL CA999198 [ GGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCNAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGGAGCAAC ] [+] EMBL CA763902 [ CTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCTATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCGCCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCGTCGGAGGGCCAATCATGATTGGTACTCTCTTGGTCCTGGCCTATCTGGTGNTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTNCTGGTCTATNCATGANGGGATATCAGACCTGGAAGCATTCTCTGATCATGANAANANAA TTATG CCTGTANATTGGAAAA GNCTTGCTTTAACTGCATGT ACACTT ANAACATGTAATTGGATG AAAC ATCAT CCTGGATATAGTGGCTCA CTGgt ] [+] EMBL CB096888 [ GCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGATGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTCTTAGGTCTGTGGTGAGGTGCCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA ACAATGCAGAGCACCTATGCAGTTTGAA ] [-] EMBL CB665000 [ AGGGCAAGTGGCAGCAAGTCCTTCTCGTGGTGTATCCATGAGGGGATATCAGACCTGGAAGCATTCTGTGATCATGAGAAGAGAATTTACGCCCCGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACCCTTAAGAACATGTAATTGGAGGAAAACAATCATCCCGGTATATATTTGGTCAGCCGTTTTAGGTATGTGGTGAGGTGGCCCAAGCAGACCTTTTTTTGCACCATCCTGATGGTTTGTGTACTTGGATACTTGGTCCCTGCTAATGTGTAATAGTATTAGCACTTAGACAATGAAGAGCCCCTATGCAGTTTGAAGgtta ] [+] EMBL C97744 [ ATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCANNCCTTTTTCTGCNCCATCTTNATGGTTTNTGTACTTGGATACTTGGTNCCTGCTAATGTGTACTAGTATTAGCNCTTA ACAATGAAGAGCNCCTGTGCAGTTTNAAGCTAAaaaaaaaa] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||