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Oryza sativa
cluster # 9042 cluster # 9042       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9042#0 length = 2294 sequences # 2  
consensus_9042#1 length = 1404 sequences # 1  
consensus_9042#2 length = 1340 sequences # 1  
consensus_9042#3 length = 992 sequences # 1  
consensus_9042#4 length = 437 sequences # 1  

consensusID : consensus_9042#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2294
fasta sequence
                              [CCGCGCGCGCGCGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTTGCCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAAAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGGAAGTGGGAATAAAGCTGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCAAAGTTTATATGCAAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCAACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAATAAACCGAGTGGAATACATGCATTCCAAGGGATTTATTCACCGTGATATCAAGCCAGACAATTTCCTTATCGGCTTAGGCCGGAAAGCGAACCAGGTGTACATAATTGATTATGGGCTTGCTAAGAAATACAAGGATCTCCAGACCCATAAACACATTCCCTACAGGGAGAACAAGAATCTGACAGGAACGGCACGTTATGCTAGTGTGAATACTCATCTTGGAATAGAGCAAAGCAGGAGAGATGATCTGGAGTCTGTTGGCTATCTTCTCCTATATTTTTTAAGAGGAAGTCTTCCATGGCAGGGTCTTAAAGCAGGTACAAAGAAACAAAAATATGACAGAATCAGTGAAAAGAAAATGCTCACCCCAGCAGAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCTGCGATTCGAAGATAAACCAGATTACTCTTATTTGAAGAAACTCTTTCGGGATGTATTTACTCGTGAAGGATACCAACTTGATTACATATTTGACTGGACTACAAGCAAAAATCCTCAGATGGGTTCTACCAATAAGCTTATTCAACAACAAAGTGGAAGAATGATTGGAATTGGACCCTCTGTTGACCGACCAGACAAAACTTCAGTGGGACAAGAGATCCGGGATAGATTTACCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCTACAGAAGCTGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCC-TCCGCCG-CCCACCGCCGCCTCGCGGGATTGTTCG-ATGTTACTCGCATG-AAAACGCCGCGCGTCTCACTCACCGCTGAACCTTTCGTCTTCCCTGAGATTTTTTCCATTTCCATGTGTGTGCTATGAACACCGTGTGCATGTGCATCGCCGCCGGCGGCCGGCGGGGAGGGGATGGCGCGCCGCCGCCGCCGCCGCCGCCGCTCCGGGGTTTGGGGCGGCGCTCGTGAGCCGTTGGATCGGCGGTGTGCGGCCCGGATCAAGTGTTGGTCACTTTTACGGGTGGGCCCTCGTAGTATATCGTATTATCGTTTGAGCCCGTTGGGAGATGGATTTTTAGGTGAGTACTGTATATAGTCGAACTCAACCATGCCAAATACTAAAAATGAAAGATTTTGGGAATGTCAACAAAATTAAAAAA]

[+] EMBL AK120765             [CCGCGCGCGCGCGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTTGCCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAAAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGGAAGTGGGAATAAAGCTGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCAAAGTTTATATGCAAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCAACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAATAAACCGAGTGGAATACATGCATTCCAAGGGATTTATTCACCGTGATATCAAGCCAGACAATTTCCTTATCGGCTTAGGCCGGAAAGCGAACCAGGTGTACATAATTGATTATGGGCTTGCTAAGAAATACAAGGATCTCCAGACCCATAAACACATTCCCTACAGGGAGAACAAGAATCTGACAGGAACGGCACGTTATGCTAGTGTGAATACTCATCTTGGAATAGAGCAAAGCAGGAGAGATGATCTGGAGTCTGTTGGCTATCTTCTCCTATATTTTTTAAGAGGAAGTCTTCCATGGCAGGGTCTTAAAGCAGGTACAAAGAAACAAAAATATGACAGAATCAGTGAAAAGAAAATGCTCACCCCAGCAGAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCTGCGATTCGAAGATAAACCAGATTACTCTTATTTGAAGAAACTCTTTCGGGATGTATTTACTCGTGAAGGATACCAACTTGATTACATATTTGACTGGACTACAAGCAAAAATCCTCAGATGGGTTCTACCAATAAGCTTATTCAACAACAAAGTGGAAGAATGATTGGAATTGGACCCTCTGTTGACCGACCAGACAAAACTTCAGTGGGACAAGAGATCCGGGATAGATTTACCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCTACAGAAGCTGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCC TCCGCCG CCCACCGCCGCCTCGCGGGATTGTTCG ATGTTACTCGCATG AAAACGCCGCGCGTCTCACTCACCGCTGAACCTTTCGTCTTCCCTGAGATTTT                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU091896             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGAGAAGGAA TGAANTGAACCTTCCGCCGCCCCACCGCCGCCTCGCGGGATTGTTCGAATGTTACTCGCATGAAAAACGCCGCGCGTCTCACTCACCGCTGAACCTTTCGTCTTCCCTGAGATTTTTTCCATTTCCATGTGTGTGCTATGAACACCGTGTGCATGTGCATCGCCGCCGGCGGCCGGCGGGGAGGGGATGGCGCGCCGCCGCCGCCGCCGCCGCCGCTCCGGGGTTTGGGGCGGCGCTCGTGAGCCGTTGGATCGGCGGTGTGCGGCCCGGATCAAGTGTTGGTCACTTTTACGGGTGGGCCCTCGTAGTATATCGTATTATCGTTTGAGCCCGTTGGGAGATGGATTTTTAGGTGAGTACTGTATATAGTCGAACTCAACCATGCCAAATACTAAAAATGAAAGATTTTGGGAATGTCAACAAAATTAAAAAA]


>consensus_9042#0 CCGCGCGCGCGCGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCAC CCACCCTTCCTCCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGC ATCGCATCCGCTGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTT TTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGC TTTTTTTTTTTGCCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGG TGATGCTGCTTCAGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAAAATTCTGTG GTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCA GCGATCAGGGTGTGGTGACCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGA AGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGG AAGTGGGAATAAAGCTGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCA AAGTTTATATGCAAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCG CTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCA ACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAATAA ACCGAGTGGAATACATGCATTCCAAGGGATTTATTCACCGTGATATCAAGCCAGACAATT TCCTTATCGGCTTAGGCCGGAAAGCGAACCAGGTGTACATAATTGATTATGGGCTTGCTA AGAAATACAAGGATCTCCAGACCCATAAACACATTCCCTACAGGGAGAACAAGAATCTGA CAGGAACGGCACGTTATGCTAGTGTGAATACTCATCTTGGAATAGAGCAAAGCAGGAGAG ATGATCTGGAGTCTGTTGGCTATCTTCTCCTATATTTTTTAAGAGGAAGTCTTCCATGGC AGGGTCTTAAAGCAGGTACAAAGAAACAAAAATATGACAGAATCAGTGAAAAGAAAATGC TCACCCCAGCAGAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACT ACTGTCGTTCCCTGCGATTCGAAGATAAACCAGATTACTCTTATTTGAAGAAACTCTTTC GGGATGTATTTACTCGTGAAGGATACCAACTTGATTACATATTTGACTGGACTACAAGCA AAAATCCTCAGATGGGTTCTACCAATAAGCTTATTCAACAACAAAGTGGAAGAATGATTG GAATTGGACCCTCTGTTGACCGACCAGACAAAACTTCAGTGGGACAAGAGATCCGGGATA GATTTACCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAG ACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCTACAGAAGCTGTTGTTG ATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCG CCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGA ACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCG CCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGG CAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGA GGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATGTTACTCG CATGAAAACGCCGCGCGTCTCACTCACCGCTGAACCTTTCGTCTTCCCTGAGATTTTTTC CATTTCCATGTGTGTGCTATGAACACCGTGTGCATGTGCATCGCCGCCGGCGGCCGGCGG GGAGGGGATGGCGCGCCGCCGCCGCCGCCGCCGCCGCTCCGGGGTTTGGGGCGGCGCTCG TGAGCCGTTGGATCGGCGGTGTGCGGCCCGGATCAAGTGTTGGTCACTTTTACGGGTGGG CCCTCGTAGTATATCGTATTATCGTTTGAGCCCGTTGGGAGATGGATTTTTAGGTGAGTA CTGTATATAGTCGAACTCAACCATGCCAAATACTAAAAATGAAAGATTTTGGGAATGTCA ACAAAATTAAAAAA



consensusID : consensus_9042#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1404
fasta sequence
                              [TTTGGAAAATACAGTATATGCAAAGAATTTCCACCTTTTAGAAGAAACATGATGACTTACCCATTGTGTCTTTTGCAGATGCTGTCTTCAAAGGATTTGAATTTTGTGGGCTACACGTACAAGAACTTCGAACTTGTGAATGATCCTGAAGTACTTGGAATGGGTACTCTACTCCCCATCTTCTCAATAAGTAACCATGTTTCTTTCTCGAGAATATCATAGTACCAGTGCAAACCTAATGACATAGAGCATGTCTCTTCCAGAACTGCATTATGTTTCTTCCATCCTATCTGGAGCTATAATTCTATACAAGGCCAACTATTTGAGGCACATGATTGAGTTGCAATATATGTTCTAGTCTTTAATACTCTTTTACTTTCTACACAGCTGAGTTGAAGAAGAAGGAGAAGGCTAAGAGACCAAGCGCCAAATCCCTCTTTGGTATTCCCTCAAGAGCCTTGGCAGTGTTGTGTTCTTCTTCAATTAGAAGGCACATTTGATTTGATATCTTCTCCTCTTTTTTTTCTTTCTGTTGATGCCATAGATTCTTCACCTGACGCAGAGGAGCAACCAGCACCAGCACCAGCACCAGCTGAAAACGACGAAGGAAGTACCAGGAGTACAGAGCCTGACATGCCAAGAAGCCTGAGCGCACCGTCGACATAGAGGCTTTGCTCTGAGCCCAAACACATATGTTACCAACACGTAGCAACTGGCATTCACTTCGTCAACATAGGGGCTTTGCTCTGAATCCCCCAGCAGAGGTACTGATGCTTGCCATCACGAAGTTCGTCATTCTATTATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATGTTACTCGCATGAAAACGCCGCGC]

[-] EMBL AK107522             [TTTGGAAAATACAGTATATGCAAAGAATTTCCACCTTTTAGAAGAAACATGATGACTTACCCATTGTGTCTTTTGCAGATGCTGTCTTCAAAGGATTTGAATTTTGTGGGCTACACGTACAAGAACTTCGAACTTGTGAATGATCCTGAAGTACTTGGAATGGGTACTCTACTCCCCATCTTCTCAATAAGTAACCATGTTTCTTTCTCGAGAATATCATAGTACCAGTGCAAACCTAATGACATAGAGCATGTCTCTTCCAGAACTGCATTATGTTTCTTCCATCCTATCTGGAGCTATAATTCTATACAAGGCCAACTATTTGAGGCACATGATTGAGTTGCAATATATGTTCTAGTCTTTAATACTCTTTTACTTTCTACACAGCTGAGTTGAAGAAGAAGGAGAAGGCTAAGAGACCAAGCGCCAAATCCCTCTTTGGTATTCCCTCAAGAGCCTTGGCAGTGTTGTGTTCTTCTTCAATTAGAAGGCACATTTGATTTGATATCTTCTCCTCTTTTTTTTCTTTCTGTTGATGCCATAGATTCTTCACCTGACGCAGAGGAGCAACCAGCACCAGCACCAGCACCAGCTGAAAACGACGAAGGAAGTACCAGGAGTACAGAGCCTGACATGCCAAGAAGCCTGAGCGCACCGTCGACATAGAGGCTTTGCTCTGAGCCCAAACACATATGTTACCAACACGTAGCAACTGGCATTCACTTCGTCAACATAGGGGCTTTGCTCTGAATCCCCCAGCAGAGGTACTGATGCTTGCCATCACGAAGTTCGTCATTCTATTATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATGTTACTCGCATGAAAACGCCGCGC]


>consensus_9042#1 TTTGGAAAATACAGTATATGCAAAGAATTTCCACCTTTTAGAAGAAACATGATGACTTAC CCATTGTGTCTTTTGCAGATGCTGTCTTCAAAGGATTTGAATTTTGTGGGCTACACGTAC AAGAACTTCGAACTTGTGAATGATCCTGAAGTACTTGGAATGGGTACTCTACTCCCCATC TTCTCAATAAGTAACCATGTTTCTTTCTCGAGAATATCATAGTACCAGTGCAAACCTAAT GACATAGAGCATGTCTCTTCCAGAACTGCATTATGTTTCTTCCATCCTATCTGGAGCTAT AATTCTATACAAGGCCAACTATTTGAGGCACATGATTGAGTTGCAATATATGTTCTAGTC TTTAATACTCTTTTACTTTCTACACAGCTGAGTTGAAGAAGAAGGAGAAGGCTAAGAGAC CAAGCGCCAAATCCCTCTTTGGTATTCCCTCAAGAGCCTTGGCAGTGTTGTGTTCTTCTT CAATTAGAAGGCACATTTGATTTGATATCTTCTCCTCTTTTTTTTCTTTCTGTTGATGCC ATAGATTCTTCACCTGACGCAGAGGAGCAACCAGCACCAGCACCAGCACCAGCTGAAAAC GACGAAGGAAGTACCAGGAGTACAGAGCCTGACATGCCAAGAAGCCTGAGCGCACCGTCG ACATAGAGGCTTTGCTCTGAGCCCAAACACATATGTTACCAACACGTAGCAACTGGCATT CACTTCGTCAACATAGGGGCTTTGCTCTGAATCCCCCAGCAGAGGTACTGATGCTTGCCA TCACGAAGTTCGTCATTCTATTATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTT TCACCAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCG TTCCCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACA ATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCA GGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCC CACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGG CGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCC CGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTC GCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGG CGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGAT GTTACTCGCATGAAAACGCCGCGC



consensusID : consensus_9042#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1340
fasta sequence
                              [TCCCTTCCCTTCCCTTCCCCCTTGGAACCACCAACGCATGCGAACGCCCCCGCGCGCGCGCGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTGCCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGGAAGTGGGAATAAAGCTGGTATGTCCTGATAAAATTTATTATAATTTATTTACGGGTTGCATTTGTTATGGCATTTCCCTTGCCTAGATATCCTTTTTTTCTTTTCTTTTCTTTTTTTGAAGTTATGTATAGGTTAGAGTTGAAATGTTTGCTAAAAATATCGGTTTCTTTTTTATTCCCCCTCTATCTCTGATTTGTGCCAGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCAAAGTTTATATGCAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCAACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAGTAAGTTCACCAGGCTCTAACTATGAATGAATACAAGATGCTGCAGTGCTGGGTGCTCCTAGAGTTAGTTAGGAAGAAAATCCACCTATGGAGTTTGATCACAACTTTCTTTTTTTTCTCTCCAAATCCTGTCTGGAACTTGTTCGCATATTCTTACCCATAACCCATGCAACAAAAATGTTCGAGATAATGATCATGCAAAATACACAAACTCCACCAAAGGCTAACGTGAGGAGATCGTGATCCTGAACATGATTAGGATGATTATCTAATTCTCTTCAGAAAAATGCAAAGTTAAGTCAGGCCTTTAAGAACAAGGGAGGACATTTAAAT]

[+] EMBL AK070314             [TCCCTTCCCTTCCCTTCCCCCTTGGAACCACCAACGCATGCGAACGCCCCCGCGCGCGCGCGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTGCCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGGAAGTGGGAATAAAGCTGGTATGTCCTGATAAAATTTATTATAATTTATTTACGGGTTGCATTTGTTATGGCATTTCCCTTGCCTAGATATCCTTTTTTTCTTTTCTTTTCTTTTTTTGAAGTTATGTATAGGTTAGAGTTGAAATGTTTGCTAAAAATATCGGTTTCTTTTTTATTCCCCCTCTATCTCTGATTTGTGCCAGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCAAAGTTTATATGCAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCAACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAGTAAGTTCACCAGGCTCTAACTATGAATGAATACAAGATGCTGCAGTGCTGGGTGCTCCTAGAGTTAGTTAGGAAGAAAATCCACCTATGGAGTTTGATCACAACTTTCTTTTTTTTCTCTCCAAATCCTGTCTGGAACTTGTTCGCATATTCTTACCCATAACCCATGCAACAAAAATGTTCGAGATAATGATCATGCAAAATACACAAACTCCACCAAAGGCTAACGTGAGGAGATCGTGATCCTGAACATGATTAGGATGATTATCTAATTCTCTTCAGAAAAATGCAAAGTTAAGTCAGGCCTTTAAGAACAAGGGAGGACATTTAAAT]


>consensus_9042#2 TCCCTTCCCTTCCCTTCCCCCTTGGAACCACCAACGCATGCGAACGCCCCCGCGCGCGCG CGCCCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCT CCTCCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGC TGCGTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTG GCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTG CCTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTC AGCAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAAC AGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTG TGGTGACCATGGAGAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGG GTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGGGGAGGAAGTGGGAATAAA GCTGGTATGTCCTGATAAAATTTATTATAATTTATTTACGGGTTGCATTTGTTATGGCAT TTCCCTTGCCTAGATATCCTTTTTTTCTTTTCTTTTCTTTTTTTGAAGTTATGTATAGGT TAGAGTTGAAATGTTTGCTAAAAATATCGGTTTCTTTTTTATTCCCCCTCTATCTCTGAT TTGTGCCAGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGAATCCAAAGTTTAT ATGCAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGGTGTCGCTGGGGAGC ACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTGTTCAACAGCTGCA ACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAATAGTAAGTTCACCAG GCTCTAACTATGAATGAATACAAGATGCTGCAGTGCTGGGTGCTCCTAGAGTTAGTTAGG AAGAAAATCCACCTATGGAGTTTGATCACAACTTTCTTTTTTTTCTCTCCAAATCCTGTC TGGAACTTGTTCGCATATTCTTACCCATAACCCATGCAACAAAAATGTTCGAGATAATGA TCATGCAAAATACACAAACTCCACCAAAGGCTAACGTGAGGAGATCGTGATCCTGAACAT GATTAGGATGATTATCTAATTCTCTTCAGAAAAATGCAAAGTTAAGTCAGGCCTTTAAGA ACAAGGGAGGACATTTAAAT



consensusID : consensus_9042#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 992
fasta sequence
                              [AGTACTATTACAAAGCTATAAAGCTAACAAATACTCCCTCCGTCCCAAAATATAACAACTTTAATCACTTACAATTTGCCTCAAAATATAACTTCACCAAGATTCTCTTCCCAACCAATCACAATTATCCATCATTCACTTTTCTCATCTACTTCCACTTCTCAACCAATCACAATCTTTACATATTTAATTTTACCTACTTTCTTAATAAATGTGTCCAACACTCTAAAACTTCTTATATCGTGGGACAGAGGTAGTAGATTATTAGAGAAAGTTATTGCATGATCAACGCTGATACAAAATGTTTTCAAAGAAACCATGCTTTTTGGATGCGTGTCACGAATAAGCCATACCTCCAAACACACCCCAGCAGAGGTACTGATGCTTGCCATCACGAAGTTCGTCATTCTATTATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATG]

[-] EMBL AK066729             [AGTACTATTACAAAGCTATAAAGCTAACAAATACTCCCTCCGTCCCAAAATATAACAACTTTAATCACTTACAATTTGCCTCAAAATATAACTTCACCAAGATTCTCTTCCCAACCAATCACAATTATCCATCATTCACTTTTCTCATCTACTTCCACTTCTCAACCAATCACAATCTTTACATATTTAATTTTACCTACTTTCTTAATAAATGTGTCCAACACTCTAAAACTTCTTATATCGTGGGACAGAGGTAGTAGATTATTAGAGAAAGTTATTGCATGATCAACGCTGATACAAAATGTTTTCAAAGAAACCATGCTTTTTGGATGCGTGTCACGAATAAGCCATACCTCCAAACACACCCCAGCAGAGGTACTGATGCTTGCCATCACGAAGTTCGTCATTCTATTATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATG]


>consensus_9042#3 AGTACTATTACAAAGCTATAAAGCTAACAAATACTCCCTCCGTCCCAAAATATAACAACT TTAATCACTTACAATTTGCCTCAAAATATAACTTCACCAAGATTCTCTTCCCAACCAATC ACAATTATCCATCATTCACTTTTCTCATCTACTTCCACTTCTCAACCAATCACAATCTTT ACATATTTAATTTTACCTACTTTCTTAATAAATGTGTCCAACACTCTAAAACTTCTTATA TCGTGGGACAGAGGTAGTAGATTATTAGAGAAAGTTATTGCATGATCAACGCTGATACAA AATGTTTTCAAAGAAACCATGCTTTTTGGATGCGTGTCACGAATAAGCCATACCTCCAAA CACACCCCAGCAGAGGTACTGATGCTTGCCATCACGAAGTTCGTCATTCTATTATTGGCA ACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGTTCTGTGCAAATCTTATCCAT CAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTGCTGTTGAGGCCTTCGCCAGA AGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCC TTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTGTTGATTCGGAGAGAACACGAACCA TATCCAGGAACAGGAGCTCGGCGAAGATGCCCACCGCCGCCGCCGCCGCCACCCCGTCTA GCCGGGGGACATCCTCGAAAGGCGACGGCGGCGAGCAGAACCGGGCCGGCCGGTGGGTGT CGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGCCGCCGCCCAGCGGCACCACCACCACC ACCACCACTCGGCCGCCGCGGACGACAGGTCGCCGCCGGCAGCGAAGGGGGGCACCGCTA TCCGGTGCTTCGAGCGCCTCTCGATCGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGC CGCCCACCGCCGCCTCGCGGGATTGTTCGATG



consensusID : consensus_9042#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [GGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTACTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGNAATATCTCGGTGTAATATACATAATNGGGAGGAAGTGGGAATAAAACTGGAATCTGTGAGATCAAAAC]

[+] EMBL C98909               [GGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTACTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGATCCTGCGCTGATTCGATCATCCTCCGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGAATTGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAACAGAGAAGCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGACCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCATTTGGGGAGNAATATCTCGGTGTAATATACATAATNGGGAGGAAGTGGGAATAAAACTGGAATCTGTGAGATCAAAAC]


>consensus_9042#4 GGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGCGTACTCGGC GGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCTTAGCTCCGAT CCTGCGCTGATTCGATCATCCTCCGGTTCTTCATCTAAGAGGGTGATGCTGCTTCAGAAT TGGCAGCTAGCTAACTCTTTAGACCAAAAGAAGAATTCTGTGGTTATATGCAACAGAGAA GCGCATTCTTGCTTTGATATTCGCCGTTTTACCGGGTCGGCAGCGATCAGGGTGTGGTGA CCATGGAGCAAGTGGTCGGAGGGAAGTATAAGCTCGGGAGGAAGATTGGGAGTGGGTCAT TTGGGGAGNAATATCTCGGTGTAATATACATAATNGGGAGGAAGTGGGAATAAAACTGGA ATCTGTGAGATCAAAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9042#2      ---------------------------------------------------------TCC 3
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ------------------------------------------------------------
consensus_9042#1      TTTGGAAAATACAGTATATGCAAAGAATTTCCACCTTTTAGAAGAAACATGATGACTTAC 60
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      CTTCCCTTCCCTTCCCCCTTGGAACCACCAACGCATGCGAACGCCCCCGCGCGCGCGCGC 63
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ----------------------------------------------CCGCGCGCGCGCGC 14
consensus_9042#1      CCATTGTGTCTTTTGCAGATGCTGTCTTCAAAGGATTTGAATTTTGTGGGCTACACGTAC 120
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      CCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCT 123
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CCCTCCCTCCCCACCATTCCTTCTCGCCGCTCCCTCCGCAACCCACCCACCCTTCCTCCT 74
consensus_9042#1      AAGAACTTCGAACTTGTGAATGATCCTGAAGTACTTGGAA---TGGGTACTCTACTCCCC 177
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      CCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGC 183
consensus_9042#4      ---------GGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGC 51
consensus_9042#0      CCCTTCCCCGGTTGCAGGCGCGGCGTCGATGCGATCCTGCCGCGGCATCGCATCCGCTGC 134
consensus_9042#1      ATCTTCTCAATAAGTAACCATGTTTCTTTCTCGAGAATATCATAGTACCAGTGCAAACCT 237
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      GTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCT 243
consensus_9042#4      GTA-CTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCT 110
consensus_9042#0      GTAGCTCGGCGGCCGGGGGGTGGCGCGACTTCTTCCTCTTTCTCTTTTGCTTTCCTGGCT 194
consensus_9042#1      AATGACATAGAGCATGTCTCTTCCAGAACTGCATTATGTTTCTTCCATCCTATCTGGAGC 297
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      TA-GCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTT-GC 301
consensus_9042#4      TA-GCTCCGATCCTGCGCTGATTCGATCATCCTCCG------------------------ 145
consensus_9042#0      TA-GCTCCGATCCTGCGCTGATTCGATCATCCTCCGATTTCGGTGGCTTTTTTTTTTTGC 253
consensus_9042#1      TATAATTCTATACAAGGCCAACTATTTGAGGCACATGATTGAGTTGCAATATATGTT--C 355
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      CTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCA 361
consensus_9042#4      -----------------------------GTTCTTCATCTAAGAGGGTGATGCTGCTTCA 176
consensus_9042#0      CTGGTGTTTCTGCTCGACCATGCTGGCAGGTTCTTCATCTAAGAGGGTGATGCTGCTTCA 313
consensus_9042#1      TAGTCTTTAATACTCTTTTACTTTCTACACAGCTGAGTTGAAGAAGAAGGAGAAGGCTAA 415
consensus_9042#3      --------AGTACTATTACAAAG-CTATAAAGCTAA---CAAATACTCCCTCCGTCCCAA 48
                                                      **      **                 *

consensus_9042#2      GCAATTGGCAGCTAGCTAACTCTTTAGA----CCAAAAGAAGAATTCTGT---GGTTATA 414
consensus_9042#4      G-AATTGGCAGCTAGCTAACTCTTTAGA----CCAAAAGAAGAATTCTGT---GGTTATA 228
consensus_9042#0      GCAATTGGCAGCTAGCTAACTCTTTAGA----CCAAAAGAAAAATTCTGT---GGTTATA 366
consensus_9042#1      GAGACCAAGCGCCAAATCCCTCTTTGGTATTCCCTCAAG---AGCCTTGGCAGTGTTGTG 472
consensus_9042#3      AATATAACAACTTTAATCACT-TACAATTTGCCTCAAAATATAACTTCACCAAGATTCTC 107
                         *            *  ** *         *   **    *            ** * 

consensus_9042#2      TGCAACAGAGA----AGCGCATTCTTGCTTTGATA--TTCGCCGTTTTACCGGGTCGGCA 468
consensus_9042#4      TGCAACAGAGA----AGCGCATTCTTGCTTTGATA--TTCGCCGTTTTACCGGGTCGGCA 282
consensus_9042#0      TGCAACAGAGA----AGCGCATTCTTGCTTTGATA--TTCGCCGTTTTACCGGGTCGGCA 420
consensus_9042#1      TTCTTCTTCAATTAGAAGGCACATTTGATTTGATATCTTCTCCTCTTTTTTTTCTTTCTG 532
consensus_9042#3      TTCCCAACCAATCACAAT-TATCCATCATTCACT--TTTCTCATCTACTTCCACTTCTCA 164
                      * *       *    *    *    *  **   *   *** *   *        *     

consensus_9042#2      GCGA--TCAGGGTGTGGTGACCATGGAG-AAGTGGTCGG---AGGGAAGTATAAGCTCGG 522
consensus_9042#4      GCGA--TCAGGGTGTGGTGACCATGGAGCAAGTGGTCGG---AGGGAAGTATAAGCTCGG 337
consensus_9042#0      GCGA--TCAGGGTGTGGTGACCATGGAGCAAGTGGTCGG---AGGGAAGTATAAGCTCGG 475
consensus_9042#1      TTGATGCCATAGATTCTTCAC-CTGACGCAGAGGAGCAACCAGCACCAGCACCAGCACCA 591
consensus_9042#3      ACCA-ATCACAATCTTTACATATTTAATTTTACCTACTTTCTTAATAAATGTGTCCAACA 223
                         *   **     *    *   *            *          *       *    

consensus_9042#2      GAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGG 582
consensus_9042#4      GAGGAAGATTGGGAGTGGGTCATTTGGGGAGNAATATCTCGGTGT-AATATACATAATNG 396
consensus_9042#0      GAGGAAGATTGGGAGTGGGTCATTTGGGGAGCTATATCTCGGTGTTAATATACATAATGG 535
consensus_9042#1      GCTGAAAACGACGAAGGAAGTACCAGGAGTAC-AGAGCCTGACAT-GCCAAGAAGCCTGA 649
consensus_9042#3      CTCTAAAACTTCTTATATCGT----GGGACAG-AGGTAGTAGATT-ATTAGAGAAAGTTA 277
                          ** *                 **      *          *    *   *   *  

consensus_9042#2      GGAGGAAGTGGGAATAAAGCTGGTATGTCCT-GATAAAATTTATTATAATTTATTTACGG 641
consensus_9042#4      GGAGGAAGTGGGAATAAAACTGGAATCTGTGAGATCAAAAC------------------- 437
consensus_9042#0      GGAGGAAGTGGGAATAAAGCTGGAATCTGTGAGATCAAAACATCCACAGCTGCATTACGA 595
consensus_9042#1      GCGCACCGTCGACATAGAGGCTT--TGCTCTGAGCCCAAACA--CATATGTTACCAACAC 705
consensus_9042#3      TTGCATGATCAACGCTGATACAAAATGTTTTCAAAGAAACCA--TGCTTTTTGGATGCGT 335
                              *        *       *           **                     

consensus_9042#2      GT------------TGCATTTGTTA--------TGGCATTTCCCTTGCCTAGATATCCTT 681
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ATCCAAAGTTTATATGCAAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGGTACGG 655
consensus_9042#1      GT------------AGCAACTG-------------GCATTCACTTCGTCAACATAGGGGC 740
consensus_9042#3      GT------------CACGAATA-------------AGCCATACCTC-CAAACACA----- 364
                                                                                  

consensus_9042#2      TTTTTCTT-----TTCTTTTCTTTTTTTGAAGTTATGTATAGGTTAGAGTTGAAATGTTT 736
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      TGTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTT 715
consensus_9042#1      TTTGCTCT--------GAATCCCCCAGCAGAGGTACTGAT-GCTTGCCATCACGAAGTTC 791
consensus_9042#3      ---------------------CCCCAGCAGAGGTACTGAT-GCTTGCCATCACGAAGTTC 402
                                                                                  

consensus_9042#2      GCTAAA-------AATATCGGTTTCTTTTTTATTCCCCCTCTA----TCTCTGATT---- 781
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GTTCAACAGCTGCAACAGGAAATTCTCTCTCAAAACCGTCCTTATGCTTGCTGATCAAAT 775
consensus_9042#1      GTCATTCTATT--ATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGT 849
consensus_9042#3      GTCATTCTATT--ATTGGCAACTCCTAGATGCATATGCACTAAAATTGTTTTCACCAGGT 460
                                                                                  

consensus_9042#2      --TGTGCCA---GGAATCTGTGAGATCAAAA-----CATCCACAGCTG-CATTACGAATC 830
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      AATAAACCGAGTGGAATACATGCATTCCAAGGGATTTATTCACCGTGA-TATCAAGCCAG 834
consensus_9042#1      TCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTG 909
consensus_9042#3      TCTGTGCAAATCTTATCCATCAGAGTTCACCTCATATTTCCACTACTGTCGTTCCCGGTG 520
                                                                                  

consensus_9042#2      CAAAGTTTATATGCAATGCAAGGCGGAAATGGTATCCCACATATGAAGTGG--TACGGT- 887
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ACAATTTCCTTATCGGCTTAGGCCGGAAAGCGAACCAGGTGTACATAATTGATTATGGG- 893
consensus_9042#1      CTG---TTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCA 966
consensus_9042#3      CTG---TTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGCCTCGGAGACAATTCCA 577
                                                                                  

consensus_9042#2      GTCGCTGGGGAGCACAATGTTATGGTGATTGATCTTCTTGGCCCAAGTTTGGAGGACTTG 947
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CTTGCTAAGAAATACAAGGATCTCCAGACCCATAAACACATTCCCTACAGGGAGAACAAG 953
consensus_9042#1      GGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTG- 1025
consensus_9042#3      GGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCACTTTGTTTCGTGTGAATCAGGTTG- 636
                                                                                  

consensus_9042#2      --TTCAACAGCTGCAACAGGAAATTCTC-TCTCAAAACCGTCCTTATGCTTG-------C 997
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      AATCTGACAGGAACGGCACGTTATGCTAGTGTGAATACTCATCTTGGAATAGAGCAAAGC 1013
consensus_9042#1      --TTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCAC 1083
consensus_9042#3      --TTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCCAC 694
                                                                                  

consensus_9042#2      TGATCAAAT-------AGTAAGTTCACCAGGCTCTAAC-TATGAATGAATACAAGATGCT 1049
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      AGGAGAGATGATCTGGAGTCTGTTGGCTATCTTCTCCTATATTTTTTAAGAGGAAGTCTT 1073
consensus_9042#1      CGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGA 1143
consensus_9042#3      CGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGCGA 754
                                                                                  

consensus_9042#2      GCAGTGCTGGGTGCTCCTAGAGTTAGTTAGGAAGAAAATCCACCTATGGAGTTTGATCAC 1109
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CCATGGCAGGGTCTTAAAGCAGGTACAAAGAAACAAAAATATGACAGAATCAGTGAAAAG 1133
consensus_9042#1      GCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGC 1203
consensus_9042#3      GCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCCGC 814
                                                                                  

consensus_9042#2      AACTTTCTTTTTT---------TTCTCTCCAAATCCTGTC--TGGAACTTGTTCGCATAT 1158
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      AAAATGCTCACCCCAGCAGAGGTTCTGTGCAAATCTTATCCATCAGAGTTCACCTCATAT 1193
consensus_9042#1      CGCCGCCCAGCGGCACCA----CCACCACCACCACCACTCGGCCGCCGCGGACGACAGGT 1259
consensus_9042#3      CGCCGCCCAGCGGCACCA----CCACCACCACCACCACTCGGCCGCCGCGGACGACAGGT 870
                                                                                  

consensus_9042#2      TCTTACCCATAAC---CCATGCAACAAAAATGTTCGAGATAATGATCATGCAAAATACAC 1215
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      TTCCACTACTGTCGTTCCCTGCGATTCGAAGATAAACCAGATTACTCTTATTTGAAGAAA 1253
consensus_9042#1      CGCCGCCGGCAGCG--AAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTC---TCGAT 1314
consensus_9042#3      CGCCGCCGGCAGCG--AAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTC---TCGAT 925
                                                                                  

consensus_9042#2      AAACTCCACCAAAGGCTAACGTGAGGAGATCGTGATCCTGA--ACATGATTAGGATGATT 1273
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CTCTTTCGGGATGTATTTACTCGTGAAGGATACCAACTTGATTACATATTTGACTGGACT 1313
consensus_9042#1      CGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGC-CGCCTCGCGGGATT 1373
consensus_9042#3      CGGCGGCGAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGC-CGCCTCGCGGGATT 984
                                                                                  

consensus_9042#2      ATC--TAATTCTCTTCAGAAAAATGCAAA-GTTAAGTCAGGCCTTTAAGAACAAGGGAGG 1330
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ACAAGCAAAAATCCTCAGATGGGTTCTACCAATAAGCTTATTCAACAACAAAGTGGAAGA 1373
consensus_9042#1      GTTCGATGTTACTCGCATGAAAACGCCGCGC----------------------------- 1404
consensus_9042#3      GTTCGATG---------------------------------------------------- 992
                                                                                  

consensus_9042#2      ACATTTAAAT-------------------------------------------------- 1340
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ATGATTGGAATTGGACCCTCTGTTGACCGACCAGACAAAACTTCAGTGGGACAAGAGATC 1433
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CGGGATAGATTTACCGGTGCTGTTGAGGCCTTCGCCAGAAGAAACCCGGGTTCCGGTCGC 1493
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CTCGGAGACAATTCCAGGCACAAAAGCCTCGCGGATTCCTTTGGTTCATCTACAGAAGCT 1553
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GTTGTTGATTCGGAGAGAACACGAACCATATCCAGGAACAGGAGCTCGGCGAAGATGCCC 1613
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      ACCGCCGCCGCCGCCGCCACCCCGTCTAGCCGGGGGACATCCTCGAAAGGCGACGGCGGC 1673
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GAGCAGAACCGGGCCGGCCGGTGGGTGTCGAGCGGCAGCGGCAGCAACCGCCCGTCCCCC 1733
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GCCGCCGCCCAGCGGCACCACCACCACCACCACCACTCGGCCGCCGCGGACGACAGGTCG 1793
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CCGCCGGCAGCGAAGGGGGGCACCGCTATCCGGTGCTTCGAGCGCCTCTCGATCGGCGGC 1853
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GAGAGGAGGAAGTGAAGTGAGCCTCCGCCGCCCACCGCCGCCTCGCGGGATTGTTCGATG 1913
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      TTACTCGCATGAAAACGCCGCGCGTCTCACTCACCGCTGAACCTTTCGTCTTCCCTGAGA 1973
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      TTTTTTCCATTTCCATGTGTGTGCTATGAACACCGTGTGCATGTGCATCGCCGCCGGCGG 2033
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      CCGGCGGGGAGGGGATGGCGCGCCGCCGCCGCCGCCGCCGCCGCTCCGGGGTTTGGGGCG 2093
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GCGCTCGTGAGCCGTTGGATCGGCGGTGTGCGGCCCGGATCAAGTGTTGGTCACTTTTAC 2153
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GGGTGGGCCCTCGTAGTATATCGTATTATCGTTTGAGCCCGTTGGGAGATGGATTTTTAG 2213
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ------------------------------------------------------------
consensus_9042#4      ------------------------------------------------------------
consensus_9042#0      GTGAGTACTGTATATAGTCGAACTCAACCATGCCAAATACTAAAAATGAAAGATTTTGGG 2273
consensus_9042#1      ------------------------------------------------------------
consensus_9042#3      ------------------------------------------------------------
                                                                                  

consensus_9042#2      ---------------------
consensus_9042#4      ---------------------
consensus_9042#0      AATGTCAACAAAATTAAAAAA 2294
consensus_9042#1      ---------------------
consensus_9042#3      ---------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)