These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9053#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2575 fasta sequence [TCCAACGCGCGCGCGCGCGGAAGAGAGCTCTCTCCTGAATCAGCTCTCTTCCCCGCGATCTCTCCTACTTTTCCTCTCCGGAGAAAGCTACGTGCGCCACCCCCACCACCCCGCCCCGCCGTCGTCGAGGCGCTGGCGCCGGCGGGCTGGACATGGCCGGAGCGCCGTGCCTCCTGCGCGTGCTAGCCGTCTCCTCCTGCCTCTGCCTCCTCGCCGACGCCGCGCGCCTCCTGGCGGCGG-GCCGGCGGAGGAAGCCGACGCGCTGCTCAAGCTCAAGGCCGGCATCGTGGACGGCGGCGGCGCGCTGGACAACTGGGCCGCCGGCACGAGCCCCTGCG-ATGGCGGCACCTCGGCGTGGGCCGGCGTGGTGTGCAGCAAGGGCAGCGTGCTCGGCCTGCAGCTGGAGAAGGAGGGCCTGTCCGGCGAGCTCGACCTCGCCCCGCTCAAGAGCCTCACCGGCCTCCGCACGCTCAGCTTCATGGACAACGAGTTCGCCGGCGCCATGCCCGACGTGAAGGGCCTCGGCGGGCTCCGCGCCATCTTCCTGTCCGGGAACAAGTTCTCCGGCGAGATCCCCGCCGACGCGTTCGCCGGGATGGGCTGGCTCAAGAAGGTGTCCCTGTCGCGGAACGGCTTCACCGGCGCCATCCCGGCCTCGCTCGCCGCCGTGCCGAGGCTCCTCGACCTCCAGCTCAACGACAACAAGTTCACGGGCAAGATCCCCGACTTCCCCCAGAAGGATCTCAAGGTGTTCGACGTCTCCAACAACGAGCTGGATGGGGAGATCCCGGCGAGCCTCAAATCAATCGATCCACAGATGTTCGAGGGCAACAAGAAGCTCTGC-GGCGCGCCAGTCGACGCGAAATGCGAGGCGCCATCCCCAGCGGCAACGACGTCGCCGCCGGCGGCGACATCCGGCAAGATCGGGACCTCGCCGTCTCCCACGGCCGCCGCCGAGACAACCACAACGGGCACAGTGCCAGCCGAGGAGGGGACGCAGGGCGCGACGAAGCCCACCAAGGGATCGACGTCGTTCGGCGTCCTCGCCGCGTTCCTCGGCACGCTGGCCATCATCGGCTTCGCGGTGGTCGAGCTCCAGAGGCGGCGAGAGTACAACACCCAGAACTTCGGCCCTGCAGCTTCAACCAAGCCCACATTGCCATCAGCTCCCGCGTCACCAGCAACCAAGCCCACGCACGCCGCCGCCGCCGCCACCGCCGCAGCCGCCACCACCGGAGGAGGCGGCGCGCGAAGCAGCAGCGTGAGCGGGAGCACGGCGAGGGGCGGCGGCGGGAAGGCGGGGGAGCAAGGGCGGCTGACGTTCGTGCGGGACGACGACAGGGGGAGGTTCTTCGAGCTGCAGGACCTGCTGAAGGCGTCGGCGGAGGTGCTCGGCGCCGCCAACCTCGGCGTGTGCTACCGCGCTACGCTCACCGGCGGCCACTCCGTGGTGGTGAAGCGGTTCAAGGAGATGAACCGCGTGGGGAAGGAGGACTTCGAGGAGCACATGCGGCGGCTCGGCCGCCTCTCCCACCCCAACCTCCTCCCGCTCATCTCCTACTACTACCGCAAGGAGGAGAAGCTCCTCATCCACGACTACGTCCCCAACAAGAGCCTTGCTCACCTCCTCCACGGTGAGGGTCGGAGGGTGAAGAAGCTGGTGCACTGGCCGGCGAGGCTGAAGCTGGTGAAGGGGGTGGCGCGAGCGCTCCAATACCTGTACGACGAGCTGCCGATGCTGACGGTGCCGCACGGCCACCTCAAGTCGTCCAACATCCTCCTCAACGACCGCTTCGAACCGCTGCTCACCGACTACTCGCTGGTCCCGGTGATGAACCAGTCGCACTCGGCGCAGCTCATGGTGGCCTTCAAGTCGCCGGAGCGGAGGCAGTTCGGCCGCTCCTCCAAGAAGAGCGACGTCTGGTGCCTCGGCATCCTCATCCTCGAGATCCTCACCGGCCGGCCGCCGTCCTACGACCCGCCGCCGCAGCCGGAGGCGGCGACGGCGAACGGCGACCTCGTCGGAGCGGTGGCGTCGACGCCGGAGGGGGAGTGGCTGGAGAAGGTGGTGGACGCGGACATGATCAGGAAGTGGGAGGACGAGGAGAGCAAGGGGGAGATGGTGAAGCTGATCAAGATCGGGATGGCGTGCTGCGAGGCCGCCGTGGACAGCCGGTGGGAGCTCAAGACGGCGGTGGAGAGCATCGAGGAGCTCAAGGGGGGGAAGGAGGAGGACGCCAACGACGAGCACTCCTTCTACTCCTCGATCGACGGCGACGAATTCGCCAGCGTCGCCATCAACTAACTCGGAAATCAACCCACATTAGCGCGCGCATCGGTTGTAATTAAGCAGCATCAAATGATATGTTAAAAAGCTCATTATGTAAAGTATACAGAAATGATGCCTAACACACTAAATCTGAACTAGCATTCTGTAAAAAATGTACGTCTTTTTCGATTTTCTTTTCGTTAGCATTTGACTCATTTCATTTCTCTTTTTTTTTTTTTGCTAGTGGCACAAAGGCCAGGGCACAGTATGTTCATGTCGTGTACAATATGAGCGATTTTACGGTCC] [+] EMBL AK121158 [TCCAACGCGCGCGCGCGCGGAAGAGAGCTCTCTCCTGAATCAGCTCTCTTCCCCGCGATCTCTCCTACTTTTCCTCTCCGGAGAAAGCTACGTGCGCCACCCCCACCACCCCGCCCCGCCGTCGTCGAGGCGCTGGCGCCGGCGGGCTGGACATGGCCGGAGCGCCGTGCCTCCTGCGCGTGCTAGCCGTCTCCTCCTGCCTCTGCCTCCTCGCCGACGCCGCGCGCCTCCTGGCGGCGGCGCCGGCGGAGGAAGCCGACGCGCTGCTCAAGCTCAAGGCCGGCATCGTGGACGGCGGCGGCGCGCTGGACACCTGGGCCGCCGGCACGAGCCCCTGCG ATGGCGGCACCTCGGCGTGGGCCGGCGTGGTGTGCAGCAAGGGCAGCGTGCTCGGCCTGCAGCTGGAGAAGGAGGGCCTGTCCGGCGAGCTCGACCTCGCCCCGCTCAAGAGCCTCACCGGCCTCCGCACGCTCAGCTTCATGGACAACGAGTTCGCCGGCGCCATGCCCGACGTGAAGGGCCTCGGCGGGCTCCGCGCCATCTTCCTGTCCGGGAACAAGTTCTCCGGCGAGATCCCCGCCGACGCGTTCGCCGGGATGGGCTGGCTCAAGAAGGTGTCCCTGTCGCGGAACGGCTTCACCGGCGCCATCCCGGCCTCGCTCGCCGCCGTGCCGAGGCTCCTCGACCTCCAGCTCAACGACAACAAGTTCACGGGCAAGATCCCCGACTTCCCCCAGAAGGATCTCAAGGTGTTCGACGTCTCCAACAACGAGCTGGATGGGGAGATCCCGGCGAGCCTCAAATCAATCGATCCACAGATGTTCGAGGGCAACAAGAAGCTCTGC GGCGCGCCAGTCGACGCGAAATGCGAGGCGCCATCCCCAGCGGCAACGACGTCGCCGCCGGCGGCGACATCCGGCAAGATCGGGACCTCGCCGTCTCCCACGGCCGCCGCCGAGACAACCACAACGGGCACAGTGCCAGCCGAGGAGGGGACGCAGGGCGCGACGAAGCCCACCAAGGGATCGACGTCGTTCGGCGTCCTCGCCGCGTTCCTCGGCACGCTGGCCATCATCGGCTTCGCGGTGGTCGAGCTCCAGAGGCGGCGAGAGTACAACACCCAGAACTTCGGCCCTGCAGCTTCAACCAAGCCCACATTGCCATCAGCTCCCGCGTCACCAGCAACCAAGCCCACGCACGCCGCCGCCGCCGCCACCGCCGCAGCCGCCACCACCGGAGGAGGCGGCGCGCGAAGCAGCAGCGTGAGCGGGAGCACGGCGAGGGGCGGCGGCGGGAAGGCGGGGGAGCAAGGGCGGCTGACGTTCGTGCGGGACGACGACAGGGGGAGGTTCTTCGAGCTGCAGGACCTGCTGAAGGCGTCGGCGGAGGTGCTCGGCGCCGCCAACCTCGGCGTGTGCTACCGCGCTACGCTCACCGGCGGCCACTCCGTGGTGGTGAAGCGGTTCAAGGAGATGAACCGCGTGGGGAAGGAGGACTTCGAGGAGCACATGCGGCGGCTCGGCCGCCTCTCCCACCCCAACCTCCTCCCGCTCATCTCCTACTACTACCGCAAGGAGGAGAAGCTCCTCATCCACGACTACGTCCCCAACAAGAGCCTTGCTCACCTCCTCCACGGTGAGGGTCGGAGGGTGAAGAAGCTGGTGCACTGGCCGGCGAGGCTGAAGCTGGTGAAGGGGGTGGCGCGAGCGCTCCAATACCTGTACGACGAGCTGCCGATGCTGACGGTGCCGCACGGCCACCTCAAGTCGTCCAACATCCTCCTCAACGACCGCTTCGAACCGCTGCTCACCGACTACTCGCTGGTCCCGGTGATGAACCAGTCGCACTCGGCGCAGCTCATGGTGGCCTTCAAGTCGCCGGAGCGGAGGCAGTTCGGCCGCTCCTCCAAGAAGAGCGACGTCTGGTGCCTCGGCATCCTCATCCTCGAGATCCTCACCGGCCGGCCGCCGTCCTACGACCCGCCGCCGCAGCCGGAGGCGGCGACGGCGAACGGCGACCTCGTCGGAGCGGTGGCGTCGACGCCGGAGGGGGAGTGGCTGGAGAAGGTGGTGGACGCGGACATGATCAGGAAGTGGGAGGACGAGGAGAGCAAGGGGGAGATGGTGAAGCTGATCAAGATCGGGATGGCGTGCTGCGAGGCCGCCGTGGACAGCCGGTGGGAGCTCAAGACGGCGGTGGAGAGCATCGAGGAGCTCAAGGGGGGGAAGGAGGAGGACGCCAACGACGAGCACTCCTTCTACTGCTCGATCGACGGCGACGAATTCGCCAGCGTCGCCATCAACTAACTCGGAAATCAACCCACATTAGCGCGCGCATCGGTTGTAATTAAGCAGCATCAAATGATATGTTAAAAAGCTCATTATGTAAAGTATACAGAAATGATGCCTAACACACTAAATCTGAACTAGCATTCTGTACTTCATGTACGTCTTTTTCGATTTTCTTTTCGTTAGCATTTGACTCATTTCATTTCTCTTTTTTTTTTTTTGCTAGTGGCACAAAGGCCAGGGCACAGTATGTTCATGTCGTGTACAATATGAGCGATTTTACGGTCC] [+] EMBL C71795 [ aAGCTCTCTCCTGAATCACCTCTCTTCCCCGCAATCTCTCCTACTTTTCCTCTCCGGAGAAAGCTACGTGCGCCACCCCCACCACCCCGCCCCGCCGTCGTCGAGGCGCTGGCG CGNCGGGCTGGACATGGCCGGAGCGCCGTGCCTCCTGCGCGTGCTAGCCGTCTCCTCCTGCNTCTGCCTCCTGGCCGACGNCGCG GCTTCCTGG GGCGG GCCGGCGGAGGAAGCCGACGCGCTGCTCAAGCTCAAGGCCGGCATCGTGGACGGCGGCGGCGCGNTGGACAACTGGGCCG CGGGACGAG CCCTGAA ATGGCGGAACttgg ] [+] EMBL C74638 [ GCTCTCTCCTGAATCAGCTCTCTTCCCCGCGATCTCTCCTACTTTTCCTCTCCGGAGAAAGCTACGTGCGCCACCCCCACCACCCCGCCCCGCCGTCGTCGAGGCGCTGGCGCCGTCGGGCTGGACATGGCCGGAGCGCCGTGCCTCCTGCGCGTGCTAGCCGTCTCCTCCTGCCTCTGCCTCCTCGCCGACGCCGCGCGCCTCCTGGCGGCGG GCCGGCGGAGGAAGCCGACGCGCTGCTCAAGCTCAAGGCCGGCATCGTGGACGGCGGCGGCGCGCTGGACAACTGGGCCGCCGG ANGAGCCCCTGCGAATGGCGG AACTCGGCGTTGGCCGGCG ] [+] EMBL C98944 [ CATGGACAACGAGTTCGCCGGCGCCATGCCCGACGTGAAGGGCCTCGGCGGGCTCCGCGCCATCTTCCTGTCCGGGAACAAGTTCTCCGGCGAGATCCCCGCCGACGCGTTCGCCGGGATGGGCTGGCTCAAGAAGGTGTCCCTGTCGCGGAACGGCTTCACCGGCGCCATCCCGGCCTCGCTCGCCGCCGTGCCGAGGCTCCTCGACCTCCAGCTCAACGACAACAAGTTCACGGGCAAGATCCCCGACTTCCCCCAGAAGGATCTCAAGGTGTTCGACGTCTCCAACAACGAGCTGGATGGGGAGATTCCGGCGAGCCTCAAATCAATCGATCCACAGATGTTCGAGGGCAACAAGAAG TCTGCGGGCGCGCCAGTCGACGCGAAATGCGAGGCGCCATCCCCAGCGGCAACGACGTCGCCGCCGG GGNGANATTCGGCAAatt ] [+] EMBL C98518 [ TCAGGAANTGGGAGGACGAGGAGAGCAAGGGGGAGATGGTGAAGCTGATCAAGATCGGGATGGCGTGCTGCGAGGCCGCCGTGGACAGCCGGTGGGAGCTCAAGACGGCGGTGGAGAGCATCGAGGAGCTCAAGGGGGGGAAGGAGGAGGACGCCAACGACGAGCACTCCTTCTACTCCTCGATCGACGGCGACGAATTCGCCAGCGTCGCCATCAACTAACTCGGAAATCAACCCACATTAGCGCGCGCATCGGTTGTAATTAAGCAGCATCAAATGATATGTTAAAAAGCTCATTATGTAAAGTATACAGAAATGATGCCTAACACACTAAATCTGAACTAGCATTCTGTAAAAA ] [+] EMBL C98945 [ tCGAGGCCCCCNTGGACACCCGGTGGGAGCTCAAGACGNCGTTGGAGAGCATCGAGGNGCTCAAGGGGGGGAAGGAGGAGGACGCCAACGACGAGCACTCCTTCTACTCCTCGATCGACGGCGACGAATTCGCCAGCGTCGCCATCAACTAACTCGGAAATCAACCCACATTAGCGCGCGCATCGGTTGTAATTAAGCAGCATCAAATGATATGTTAAAAAGCTCATTATGTAAAGTATACAGAAATGATGCCTAACACACTAAATCTGAACTAGCATTCTGTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||