cluster # 9060

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Oryza sativa
cluster # 9060 cluster # 9060 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9060#0 length = 602 sequences # 6
consensusID : consensus_9060#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 602
fasta sequence
                              [GAGTAGAAAACTTTTTTCACAACCACTCCCTATCTAACCTTACCCTCTCCCTCTCTCTCACCATCAGACCCTCTCCCTCTTCCTCTCCTCAGAGCACA-TAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCT-CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGGCAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAACGTCGGCGGTCTCTAGAGCTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTATTTCTGTGGAATATGTGAATCTTATTTTTTTCATTTGTGTGGTGACATTTGATTATTTGCATTGTGCTTGATCTATCAAATAGCAGCTGATTGGGGATAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF301846             [GAGTAGAAAACTTTTTTCACAACCACTCCCTATCTAACCTTACCCTCTCCCTCTCTCTCACCATCAGACCCTCTCCCTCTTCCTCTCCTCAGAGCACA TAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCT CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGG                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062437             [                                    ACCTTACCCTCTCCCTCTCTCTCACCATCAGACCCTCTCCCTCTTCCTCTCCTCAGAGCACA TAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCT CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGGCAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAACGTCGGCGGTCTCTAGAGCTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTATTTCTGTGGAATATGTGAATCTTATTTTTTTCATTTGTGTGGTGACATTTGATTATTTGCATTGTGCTTGATCTATCAAATAGCAGCTGATTGG                            ]
[+] EMBL CF298822             [                                                                      CTCTCCCTCTTCCTCTCCTCAGAGCACA TAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGA CGACAATG GGAG AGGGGCGGTGACATATCGGCTCCT CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGGCAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAACGTCGGCGGTCTCTAGAGCTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTATTTCTGTGGAATATGTGAATCTTATTTTTTTCATTTGTGTGGTGACATTTGATTATTTGCATTGTGCTTGATCTATCAAATAGCAGCTGATTGGGGATAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF319641             [                                                                      CTCTCCCTCTTCCTCTCCTCAGAGCACA TAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCT CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGGCAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAGCGTCGGCGGTCTCTAGAGCTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTATTTCTGTGGAATATG                                                                                                           ]
[+] EMBL CF302116             [                                                                             TCTTCCTCTCCTCAGAGCACATTAAGCCTAGCTACAAGGAGCGGCGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCT CCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTG                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF302117             [                                                                                                                                         AGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCTCGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGGGGCGGTGACATATCGGCTCCTCCCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCAACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGGCAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAACGTCGGCGGTCTCTAGAGCTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTATTTCTGTGGAATATGTGAATCTTATTTTTTTCATTTGTGTGGTGACATTTGATGATTT                                                                ]




>consensus_9060#0
GAGTAGAAAACTTTTTTCACAACCACTCCCTATCTAACCTTACCCTCTCCCTCTCTCTCA
CCATCAGACCCTCTCCCTCTTCCTCTCCTCAGAGCACATAAGCCTAGCTACAAGGAGCGG
CGGTGGCGAGGCGAGGAGGAGCAACGATGAGGAGGGGAGTCGGCTGTGGCGGTGGCGGCT
CGGCGAGGAGGGCCGGTAGCTGCGGCGGCTTGACGAGGAGGAGCGACAATGAGGAGAAGG
GGCGGTGACATATCGGCTCCTCCCCTCTCCTCCAATCCCGTCGGCAGCAGTAGCTCTTCA
ACAAGGAGGAGTGGTGACAAGGAGGCAGCTGGTGGAGACGGTAACGATGACTACACGCGG
CAAGGGTGATGCATGGCGACAGCGACCATGCGGGAAGGGCAACGTCGGCGGTCTCTAGAG
CTCCTTCATTATTCTTCTTCCTCTAGATCCAGATCCATAATTTCTTTTTTTTTCTCTTTA
TTTCTGTGGAATATGTGAATCTTATTTTTTTCATTTGTGTGGTGACATTTGATTATTTGC
ATTGTGCTTGATCTATCAAATAGCAGCTGATTGGGGATAAAAAAAAAAAAAAAAAAAAAA
AA
clustalw multiple alignements is not computed in this case