Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9066 cluster # 9066       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9066#0 length = 1951 sequences # 4  
consensus_9066#1 length = 690 sequences # 2  

consensusID : consensus_9066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1951
fasta sequence
                              [CCCCCACTCCCCCACCTCCTCCCGTCCTCCGGCCGCCGCTCCCCACCCGCCGCCGCCGCCGCCGCCCGCAGAAGCCGCAGATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCGACGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGACGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCGCCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGCCGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTGAGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGGAGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCAATGAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGCTATTGCTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGTTAATGGCACTGATTGGTCAGGCTTTGAAATGGCAACAGCACCAAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAAAGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTGTATCATGCTCAGTGGATGGAATCATTGAGGTTTGGGATTATATCAGCGGGAAGCTTAAAAAGGATCTTCAATATCAAGCTGACGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTGTTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGGTTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTGTTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTACTGCAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACTCATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTGATTGTACTGTTAAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCACCACCTCCTTTGAGGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCT-TC-AATA-TACA-TAATGACTCTACAAGGACAGGT-TGTAAAAAGTTTTTCATCTGGT-AAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTC-ACCA-AAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATC-ACTC-ACCACCCTCATAGGAACTT-GATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGAGGAAA-CAAAATTAGGTGAGGTGAGCATGATTCCTTTTGTCGCGGACTCTTGCTTTTATTGGAGCGCTGAAAATCTGAAATACTGAATGCAATTAC]

[+] EMBL AK121409             [CCCCCACTCCCCCACCTCCTCCCGTCCTCCGGCCGCCGCTCCCCACCCGCCGCCGCCGCCGCCGCCCGCAGAAGCCGCAGATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCGACGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGACGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCGCCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGCCGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTGAGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGGAGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCAATGAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGCTATTGCTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGTTAATGGCACTGATTGGTCAGGCTTTGAAATGGCAACAGCACCAAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAAAGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTGTATCATGCTCAGTGGATGGAATCATTGAGGTTTGGGATTATATCAGCGGGAAGCTTAAAAAGGATCTTCAATATCAAGCTGACGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTGTTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGGTTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTGTTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTACTGCAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACTCATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTGATTGTACTGTTAAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCACCACCTCCTTTGAGGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCT TC AATA TACA TAATGACTCTACAAGGACAGGT TGTAAAAAGTTTTTCATCTGGT AAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTC ACCA AAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATC ACTC ACCACCCTCATAGGAACTT GATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGAGGAAA CAAAATTAGGTGAGGTGAGCATGATTCCTTTTGTCGCGGACTCTTGCTTTTATTGGAGCGCTGAAAATCTGAAATACTGAATGCAATTAC]
[+] EMBL AA750070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATATTGAGTTCATCCTTTGACACTACTGTAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACTCATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTGATTGTACTGTT AGGTGTGGGATACGAAAACAACAGATTG TTGC AACA TC AG CA CA CTC  TTGA  GGA GAGATGC ACTGTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BQ908874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAGACATCTGTCAAANAGTACAGTAATGACTCTACAAGGACAGGTGTGTAAAAAGTTTTTCATCTGGTAAAACGGTAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCTACCACAAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATCTACTCTACCACCCTCATAGGAACTT GATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCCTTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGAGGAAACCAAAATTAGGTGAaaaaaaaaa                                                                    ]
[+] EMBL AU031363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATC ACTC ACCACCCTCATAGGAACTTGGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGTANCTTATATTATATAGCATTAGTAGGTANCA                                                                                                         ]


>consensus_9066#0 CCCCCACTCCCCCACCTCCTCCCGTCCTCCGGCCGCCGCTCCCCACCCGCCGCCGCCGCC GCCGCCCGCAGAAGCCGCAGATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCG ACGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGA CGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCG CCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGC CGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTG AGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGG AGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCA ATGAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGCTATTG CTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGTTAATGGCACTGATTGGTCAGGCTTTGA AATGGCAACAGCACCAAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAA CTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAA AGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTG TATCATGCTCAGTGGATGGAATCATTGAGGTTTGGGATTATATCAGCGGGAAGCTTAAAA AGGATCTTCAATATCAAGCTGACGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTG TTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGG TTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTG TTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTA CTGCAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACT CATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTG ATTGTACTGTTAAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCAC CACCTCCTTTGAGGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATA GTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGAC AGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCG TTTCACCAAAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTA GCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCA TCACTCACCACCCTCATAGGAACTTGATTGCTACTTATGCTGAAGATTGCACGATGAAAA CATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCA TGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATT TAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCC AGTGTATTCCCATTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGAGGAA ACAAAATTAGGTGAGGTGAGCATGATTCCTTTTGTCGCGGACTCTTGCTTTTATTGGAGC GCTGAAAATCTGAAATACTGAATGCAATTAC



consensusID : consensus_9066#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 690
fasta sequence
                              [ACAAGGGGGGTTTAGGCCCTCAATCATGCTTCTTACCTTATGGTGGTGCGCCATTTCCAGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGACAGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCACCAAAAGGAGAATGGATATATTGTGTAGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATCACTCACCACCCTCATAGGAACCTGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGNATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGANGAAACAAAATTAGGTGAGGTGAGCATGATTNCTTTTGTCGCAAAAAA]

[+] EMBL CA766841             [ACAAGGGGGGTTTAGGCCCTCAATCATGCTTCTTACCTTATGGTGGTGCGCCATTTCCAGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGACAGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCACCAAAAGGAGAATGGATATATTGTGTAGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATCACTCACCACCCTCATAGGAACCTGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGNATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGANGAAACAAAATTAGGTGAGGTGAGCATGATTNCTTTTGTCGC      ]
[+] EMBL AU095335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATNNAGGAAACAAAATTAGGTGAGGTGAGNATGATTCCTTTaaaaaaaaaaaa]


>consensus_9066#1 ACAAGGGGGGTTTAGGCCCTCAATCATGCTTCTTACCTTATGGTGGTGCGCCATTTCCAG GGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATT GTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGACAGGTTGTAAAAAGT TTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCACCAAAAGGA GAATGGATATATTGTGTAGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGT AAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATCACTCACCACCCT CATAGGAACCTGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGA TTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCATGATTATCCATCTC TGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATTTAGAGAACTGGGAG GTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCCAGTGTATTCCCATT GNATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGANGAAACAAAATTAGGTGA GGTGAGCATGATTNCTTTTGTCGCAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9066#0      CCCCCACTCCCCCACCTCCTCCCGTCCTCCGGCCGCCGCTCCCCACCCGCCGCCGCCGCC 60
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      GCCGCCCGCAGAAGCCGCAGATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCG 120
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      ACGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGA 180
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCG 240
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGC 300
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTG 360
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      AGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGG 420
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      AGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCA 480
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      ATGAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGCTATTG 540
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGTTAATGGCACTGATTGGTCAGGCTTTGA 600
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      AATGGCAACAGCACCAAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAA 660
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAA 720
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      AGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTG 780
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      TATCATGCTCAGTGGATGGAATCATTGAGGTTTGGGATTATATCAGCGGGAAGCTTAAAA 840
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      AGGATCTTCAATATCAAGCTGACGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTG 900
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      TTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGG 960
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      TTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTG 1020
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      TTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTA 1080
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CTGCAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACT 1140
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      CATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTG 1200
consensus_9066#1      ------------------------------------------------------------
                                                                                  

consensus_9066#0      ATTGTACTGTTAAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCAC 1260
consensus_9066#1      ------------ACAAGGGGGGTTTAGGCCCTCAATCATGCTTCTTACC--TTATGGTGG 46
                                  *   * *** *       *   *   ** **   * *  * * *    

consensus_9066#0      CACCTCCTTTGAGGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATA 1320
consensus_9066#1      TGCGCCATTTCCAGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATA 106
                        *  * ***   ***********************************************

consensus_9066#0      GTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGAC 1380
consensus_9066#1      GTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGAC 166
                      ************************************************************

consensus_9066#0      AGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCG 1440
consensus_9066#1      AGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCG 226
                      ************************************************************

consensus_9066#0      TTTCACCAAAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTA 1500
consensus_9066#1      TTTCACCAAAAGGAGAATGGATATATTGTGTAGGTGAAGACATGAACATGTATTGCTTTA 286
                      ******************************* ****************************

consensus_9066#0      GCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCA 1560
consensus_9066#1      GCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCA 346
                      ************************************************************

consensus_9066#0      TCACTCACCACCCTCATAGGAACTTGATTGCTACTTATGCTGAAGATTGCACGATGAAAA 1620
consensus_9066#1      TCACTCACCACCCTCATAGGAACCTGATTGCTACTTATGCTGAAGATTGCACGATGAAAA 406
                      *********************** ************************************

consensus_9066#0      CATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCA 1680
consensus_9066#1      CATGGAAGCCTTGATTATTTGTAACTTGCCTTTGTTCTTATCTTGTAATTGTAGGAAGCA 466
                      ************************************************************

consensus_9066#0      TGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATT 1740
consensus_9066#1      TGATTATCCATCTCTGTTCTAAGTGCTAGATAAATAGGATCTATTTTGATTTTTGTAATT 526
                      ************************************************************

consensus_9066#0      TAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCC 1800
consensus_9066#1      TAGAGAACTGGGAGGTGACCTTACTAGCTAACATTATCTTCCCTGGTGCTTCTGGAGCCC 586
                      ************************************************************

consensus_9066#0      AGTGTATTCCCATTGTATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGAGGAA 1860
consensus_9066#1      AGTGTATTCCCATTGNATCTTATATTATATAGCATTAGTAGGTATCATTGTATGGANGAA 646
                      *************** **************************************** ***

consensus_9066#0      ACAAAATTAGGTGAGGTGAGCATGATTCCTTTTGTCGCGGACTCTTGCTTTTATTGGAGC 1920
consensus_9066#1      ACAAAATTAGGTGAGGTGAGCATGATTNCTTTTGTCGCAAAAAA---------------- 690
                      *************************** **********  *                   

consensus_9066#0      GCTGAAAATCTGAAATACTGAATGCAATTAC 1951
consensus_9066#1      -------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)