These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1343 fasta sequence [CTGCAGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAGGGGGCGGCCGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA-CAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGCA--GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACGTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCG--CTCGTACGTGCGCTTGTTATGGG----GTGATTGAAGGGATGAATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCACTGTACAAGAAATAATGCATGCTACAGTACTATATGTCACTACAA] [+] EMBL AK121555 [CTGCAGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAGGGGGCGGCCGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA CAGCGAAGACCGCAGCGGCAGGGGGCGGCCGATGTCGTACGCGCGCATGCGCGGCGGACAGCAGCA GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCAAGAGTACGAAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGT ATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTAGGTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCGCTCTCGTACGTGCGCTTGTTATGGG GTGATTGAAGGGATGAATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCACTGTACAAGAAATAATGCATGCTACAGTACTATATGTCACTACAA] [+] EMBL AU166022 [ AGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCG CCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAG ] [+] EMBL AU164285 [ GCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGC ] [+] EMBL AU164286 [ GCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCA ] [+] EMBL CB966425 [ ggaatagctGCGG CGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTACCAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGGAAGGAAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACGTTACTTCGAAGGGTGATCGAGCTGGTCGCTCGCCCG CTCGTACGTGCGCTTG TATGGGGGGTGTGCTTGACGGGATG ATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCAtggtca ] [+] EMBL BI306231 [ CGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA CAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGCA GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACCTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCG CTCGTACGTGCGCTTGTTATGGG GTGtga ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||