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Oryza sativa
cluster # 9078 cluster # 9078       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9078#0 length = 1372 sequences # 2  
consensus_9078#1 length = 1231 sequences # 3  
consensus_9078#2 length = 842 sequences # 1  

consensusID : consensus_9078#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1372
fasta sequence
                              [CGCCTCCGCCTCCACGCACGGGTAGTCCCCCCCACCCCCGCCCGCCGGAGCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGCACTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGATGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCACAAGACTAGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTCTCGATGGAGGAAGTGTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTAGCATGTAGTACCGAAAACTTTTGGCTTATCGATGTAAAAAATGCTAGTGGATGCTGAATAAACTTGACTTGAAAAGTCCTACACCGATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAATTTTAGGGACTATGATGAAACTCGGCATTAGGC]

[+] EMBL AK070515             [CGCCTCCGCCTCCACGCACGGGTAGTCCCCCCCACCCCCGCCCGCCGGAGCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGCACTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGATGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCACAAGACTAGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTCTCGATGGAGGAAGTGTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTAGCATGTAGTACCGAAAACTTTTGGCTTATCGATGTAAAAAATGCTAGTGGATGCTGAATAAACTTGACTTGAAAAGTCCTACACCGATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAATTTTAGGGACTATGATGAAACTCGGCATTAGGC]
[+] EMBL CB677403             [                                                                              TTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGATTCTTCATAGTAGATGTTATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_9078#0 CGCCTCCGCCTCCACGCACGGGTAGTCCCCCCCACCCCCGCCCGCCGGAGCACACGCCGC CGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGG AGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGG TTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGAC CCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCT CAAGAAGGCTGGGGATTCTGGGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGG TGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTT GCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTC GCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGT GTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATA GATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTG GTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTT GTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTT GCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGG TTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGCA CTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGATGTTCACCATACTT ACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACACAGATT GCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCACAAGACT AGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTCTCGATGGAGGAAGT GTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTAGCATGTAGTACCGAAAACTTTTGGC TTATCGATGTAAAAAATGCTAGTGGATGCTGAATAAACTTGACTTGAAAAGTCCTACACC GATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTTCAGAACTTTGTT TTCTCGTAGAATTTGAAAATTTTAGGGACTATGATGAAACTCGGCATTAGGC



consensusID : consensus_9078#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1231
fasta sequence
                              [CCCCCCCACCCCCGCCCGCCGGAGCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTAAGAGCAGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTG-CCATTGCCTTGAAGCTGTCATTTGGTGGATCAGATCAGTTCATCTACATCCNAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGTTGTGTAAATTTGCCATTTGTGTAAATTTGCATTTATGTGTGAGTTTGCTTAAATGGGTGATCATGTTTGGCCATGCATGAGGTGCTCTATTCTGCAACAAACTTTTAAACCTTCTATGCTTCCAATTTCATTTCAGCTTATGTCAAAAAGTGTAACTCAATATGCAAATAATCGCTCTATAATGTCTGACATGACCTAAGCCTCAATTACTCAAATATATTTATTTNNCTATGTTTGTTTCATAACCTATACTAAGCAAGCAGTCNNNNATANNACNGNNNGCTTGTTATTTTTTACTCCTATGAAAGTATGGCNAANGCTNNNTTTGCNNTNNNTTTTNNNNNNNNN]

[+] EMBL CB666766             [CCCCCCCACCCCCGCCCGCCGGAGCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTAAGAGCAGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGATGCCCATTGCCTTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB622932             [            CGCCCGCCCGATCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTATTGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTAAGAGCAGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCTGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTGCTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTTTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTG CCATTGCCTTGAAGCTGTCATTTGGTGGATCAGATCAGTTCATCTACATCCNAACAT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF196955             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTTATCAGTGTAAAGGCAGTTG CCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGTTGTGTAAATTTGCCATTTGTGTAAATTTGCATTTATGTGTGAGTTTGCTTAAATGGGTGATCATGTTTGGCCATGCATGAGGTGCTCTATTCTGCAACAAACTTTTAAACCTTCTATGCTTCCAATTTCATTTCAGCTTATGTCAAAAAGTGTAACTCAATATGCAAATAATCGCTCTATAATGTCTGACATGACCTAAGCCTCAATTACTCAAATATATTTATTTNNCTATGTTTGTTTCATAACCTATACTAAGCAAGCAGTCNNNNATANNACNGNNNGCTTGTTATTTTTTACTCCTATGAAAGTATGGCNAANGCTNNNTTTGCNNTNNNTTTTNNNNNNNNN]


>consensus_9078#1 CCCCCCCACCCCCGCCCGCCGGAGCACACGCCGCCGACGGCGTACGTTGCGCTTCTTATC TCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGGAGTCCCGCACGTACGCCTCGCCGACC GCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGGTTCATAGGTTCTCATTCCAGAAGGCA TGGTAACATCTATAGACAATGTGAGAGGGTTGACCCTGGCCATATCATCAAGTGCATTTA TCGGATCAAGCTTTATTATCAAGAAAATTGGGCTCAAGAAGGCTGGGGATTCTGGGGTAA GAGCAGGTTCTGGAGGTTTCTCATACTTGTATGAGCCATTATGGTGGTTGGGGATGATAA CTATGATTCTGGGCGAGGTAGCAAACTTTGCAGCATATGCATTTGCTCCCGCTGTACTTG TTACTCCTCTAGGAGCTCTTAGCATTATATTTAGTGCAGTGCTCGCACACTTCGTCTTGA AAGAAAAACTCCATATGTTTGGTGTTGTTGGCTGTATCTTGTGTGTTGTTGGCTCTGTTG GTATAGTTTTGCATGCCCCAAAGGAGAGAGAGATTGATTCAATAGATGAAATATGGCATC TTGCTACTGAGCCAGGTTTTATTGTTTATTCATGTGTGGCTGTGGTGTCTGTTCTATTTT TGATTTTCTGGGTTGCTGAACGTTCTGGACACAGGAAGATGCTTGTTTATATTGCAATCT GTTCAACAATGGGATCTCTCACGGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGC TGTCATTTGGTGGATCAGATCAGTTCATCTACATCCNAACATGGTTCTTCATAGTAGTTG TTATAGTTTGTTGTTTGGTGCAGTTGAACTACTTAAATAAGGTTGTGTAAATTTGCCATT TGTGTAAATTTGCATTTATGTGTGAGTTTGCTTAAATGGGTGATCATGTTTGGCCATGCA TGAGGTGCTCTATTCTGCAACAAACTTTTAAACCTTCTATGCTTCCAATTTCATTTCAGC TTATGTCAAAAAGTGTAACTCAATATGCAAATAATCGCTCTATAATGTCTGACATGACCT AAGCCTCAATTACTCAAATATATTTATTTNNCTATGTTTGTTTCATAACCTATACTAAGC AAGCAGTCNNNNATANNACNGNNNGCTTGTTATTTTTTACTCCTATGAAAGTATGGCNAA NGCTNNNTTTGCNNTNNNTTTTNNNNNNNNN



consensusID : consensus_9078#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 842
fasta sequence
                              [TCCAAAGGTAAGTGCAGGTGTAGCACACTTTGGAATATGTCTTTTTTTTTTTTTTTTGCAATCCTTATCATCAAAGCATAACTACTCAAGTCAATAATTTGTTCTGAAAGTAAAGGAGAAGATATGATTGTACACTACTAATCCAAATTGTGAGTTATTTCTAAAATAGATACGTAGTACTATTTATTGATAATTCTAAATCATAAAGGCTGCTGCAGAAATATGTGTTTGAACTCTGTTTGAGTTCTGACTATTTAATTTGTTGCAGGCACTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGATGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCACAAGACTAGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTTTCGATGGAGGAAGTGTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTAGCATGTAGTACCGAAAACTTTTGGCTTATCGATTTAAAAAATGCTAGTGGATGCTGAATAAACTTGACTTGAAAAGTCTTACACCGATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAAATTTAGGGACTATGATGAAACTCGGCATTGGGCGTTTCCGCTCTACCGTGTCGATATGTGCTTTAACTTTGTTTTGTACAATAGTAGTGTTGTAAAAAGGACCTTGACAATATTTGAGTTCAGAGATCCTCC]

[-] EMBL CB622933             [TCCAAAGGTAAGTGCAGGTGTAGCACACTTTGGAATATGTCTTTTTTTTTTTTTTTTGCAATCCTTATCATCAAAGCATAACTACTCAAGTCAATAATTTGTTCTGAAAGTAAAGGAGAAGATATGATTGTACACTACTAATCCAAATTGTGAGTTATTTCTAAAATAGATACGTAGTACTATTTATTGATAATTCTAAATCATAAAGGCTGCTGCAGAAATATGTGTTTGAACTCTGTTTGAGTTCTGACTATTTAATTTGTTGCAGGCACTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGATGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCACAAGACTAGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTTTCGATGGAGGAAGTGTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTAGCATGTAGTACCGAAAACTTTTGGCTTATCGATTTAAAAAATGCTAGTGGATGCTGAATAAACTTGACTTGAAAAGTCTTACACCGATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAAATTTAGGGACTATGATGAAACTCGGCATTGGGCGTTTCCGCTCTACCGTGTCGATATGTGCTTTAACTTTGTTTTGTACAATAGTAGTGTTGTAAAAAGGACCTTGACAATATTTGAGTTCAGAGATCCTCC]


>consensus_9078#2 TCCAAAGGTAAGTGCAGGTGTAGCACACTTTGGAATATGTCTTTTTTTTTTTTTTTTGCA ATCCTTATCATCAAAGCATAACTACTCAAGTCAATAATTTGTTCTGAAAGTAAAGGAGAA GATATGATTGTACACTACTAATCCAAATTGTGAGTTATTTCTAAAATAGATACGTAGTAC TATTTATTGATAATTCTAAATCATAAAGGCTGCTGCAGAAATATGTGTTTGAACTCTGTT TGAGTTCTGACTATTTAATTTGTTGCAGGCACTGGACTCATTTAATACAGCTGTGGTCTC TCCTGTGTACTACGTGATGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAA GGATTCATTCTCACGGAATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCAT CGTTGCAGGAACTTTTCTCCTGCACAAGACTAGGGATATGGGGAATGAACCGCCGCTACC AGATGATGAAATTTGTTTCGATGGAGGAAGTGTGCGCCCAGATCGTCTGTCACAGTCTAG TAGCTAGCATGTAGTACCGAAAACTTTTGGCTTATCGATTTAAAAAATGCTAGTGGATGC TGAATAAACTTGACTTGAAAAGTCTTACACCGATTGATACGCAGACAGGCACAATCTTGT GCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAAATTTAGGGAC TATGATGAAACTCGGCATTGGGCGTTTCCGCTCTACCGTGTCGATATGTGCTTTAACTTT GTTTTGTACAATAGTAGTGTTGTAAAAAGGACCTTGACAATATTTGAGTTCAGAGATCCT CC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9078#0      CGCCTCCGCCTCCACGCACGGGTAGTCCCCCCCACCCCCGCCCGCCGGAGCACACGCCGC 60
consensus_9078#1      --------------------------CCCCCCCACCCCCGCCCGCCGGAGCACACGCCGC 34
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      CGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGG 120
consensus_9078#1      CGACGGCGTACGTTGCGCTTCTTATCTCTCTGTCGTCTCGCAGGCGGAGGCGGCCGACGG 94
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      AGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGG 180
consensus_9078#1      AGTCCCGCACGTACGCCTCGCCGACCGCCCGCGCGCGCTCGCGGATCGGAGAGGTATAGG 154
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      TTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGAC 240
consensus_9078#1      TTCATAGGTTCTCATTCCAGAAGGCATGGTAACATCTATAGACAATGTGAGAGGGTTGAC 214
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      CCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCT 300
consensus_9078#1      CCTGGCCATATCATCAAGTGCATTTATCGGATCAAGCTTTATTATCAAGAAAATTGGGCT 274
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      CAAGAAGGCTGGGGATTCTGGGGT----------TCTGGAGGTTTCTCATACTTGTATGA 350
consensus_9078#1      CAAGAAGGCTGGGGATTCTGGGGTAAGAGCAGGTTCTGGAGGTTTCTCATACTTGTATGA 334
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      GCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGC 410
consensus_9078#1      GCCATTATGGTGGTTGGGGATGATAACTATGATTCTGGGCGAGGTAGCAAACTTTGCAGC 394
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      ATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAG 470
consensus_9078#1      ATATGCATTTGCTCCCGCTGTACTTGTTACTCCTCTAGGAGCTCTTAGCATTATATTTAG 454
consensus_9078#2      ------------TCCAAAGGTAAGTGCAGGTGTAGCAC-ACTTTGGAATATGTCTTTTTT 47
                                  ***    ***  **    *     *  *  *   *  **    ***  

consensus_9078#0      TGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTG 530
consensus_9078#1      TGCAGTGCTCGCACACTTCGTCTTGAAAGAAAAACTCCATATGTTTGGTGTTGTTGGCTG 514
consensus_9078#2      TTTTTTTTTTGCAATCCTTATCATCAAAGCATAACTACTCAAGTC-AATAATTTGTTCTG 106
                      *    *  * ***  * *  ** * **** * **** *  * **    *  * *   ***

consensus_9078#0      TATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGAT 590
consensus_9078#1      TATCTTGTGTGTTGTTGGCTCTGTTGGTATAGTTTTGCATGCCCCAAAGGAGAGAGAGAT 574
consensus_9078#2      AAA---GTAAAGGAGAAGATATGATTGTACACTACTAA-----TCCAAATTGTGAGTTAT 158
                       *    **         * * ** * *** * *  *        * **   * ***  **

consensus_9078#0      TGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTC--- 647
consensus_9078#1      TGATTCAATAGATGAAATATGGCATCTTGCTACTGAGCCAGGTTTTATTGTTTATTC--- 631
consensus_9078#2      TTCTAAAATAGATACGTAGTACTATTTATTGATAATTCTAAATCATAAAGGCTGCTGCAG 218
                      *  *  *******      *   ** *    *     * *  *  **  *  *  *    

consensus_9078#0      ATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACA 707
consensus_9078#1      ATGTGTGGCTGTGGTGTCTGTTCTATTTTTGATTTTCTGGGTTGCTGAACGTTCTGGACA 691
consensus_9078#2      AAATATGTGTTTGAACTCTGTTTGAGTTCTGACTATTTAATTTGTTGCAGGCACTGGACT 278
                      *  * **  * **   ******  * ** *** * * *   *** ** * *  ****** 

consensus_9078#0      CAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAG 767
consensus_9078#1      CAGGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGGTTATCAG 751
consensus_9078#2      CATTTA-ATAC--AGCTGTGGTCTCTCCTGTGTA-CTACGTGATGT-TCACCATACTTAC 333
                      **   * ** *     * *  *     ****  * * * * *** * ****  *  * * 

consensus_9078#0      TGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATT-TGGTGGATCAAATCAGTTCATCT 826
consensus_9078#1      TGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATT-TGGTGGATCAGATCAGTTCATCT 810
consensus_9078#2      TATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGAATGCAACA-CAGATTG 392
                      * *    **       ***   *  ***   ***** *   ***    * **    **  

consensus_9078#0      ACATCCAAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACT 886
consensus_9078#1      ACATCCNAACATGGTTCTTCATAGTAGTTGTTATAGTTTGTTGTTTGGTGCAGTTGAACT 870
consensus_9078#2      CAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTCTCCTGCA-CAAGACT 451
                        *  *    ***    **  *     * ***  **    ** * *  ****     ***

consensus_9078#0      ACTTAAATAAGGCACTGGACTCATTTAATACAGCTGTGGTCTCTCCTGTGTACTACGTGA 946
consensus_9078#1      ACTTAAATAAGG--TTGTGTAAATTTGCCATTTGTGTAAATTTGCATTTAT---GTGTGA 925
consensus_9078#2      AGGGATATGGGGAATGAACCGCCGCTACCAGATGATGAAATTTGTTTCGATGG-AGGAAG 510
                      *   * **  **             *   *           *    *   *     *   

consensus_9078#0      TGTTCACCATACTTACTATTTTTGCTAACATGATTATGTACAAGGATTCATTCTCACGGA 1006
consensus_9078#1      -GTTTGCTTAAATGGGTGATCATGTT----TGGCCATGCATGAGGTGCTCTATTC----- 975
consensus_9078#2      TGTGCGCCCAGATCGTCTGTCACAGTCTAGTAGCTA-GCATGTAGTACCGAAAACTTTTG 569
                       **   *     *      *     *    *    * * *    *         *     

consensus_9078#0      ATGCAACACAGATTGCAACACAGTTATGTGGTTTTGTGACCATCGTTGCAGGAACTTTTC 1066
consensus_9078#1      -TGCAACAAACTTTTAAACC---TTCTATGCTTCC---AATTTCATTTCAG---CTTATG 1025
consensus_9078#2      GCTTATCGATTTAAAAAATGCTAGTGGATGCTGAA-TAAACTTGACTTGAA------AAG 622
                          * *         **      *   ** *      *   *   *  *          

consensus_9078#0      TCCTGCA-CAAGACTAGGGATATGGGGAATGAA---CCGCCGCTACCAGATGAT---GAA 1119
consensus_9078#1      TCAAAAAGTGTAACTCAATATGCAAATAATCGC---TCTATAATGTCTGAC-AT---GAC 1078
consensus_9078#2      TCTTACA---CCGATTGATACGCAGACAGGCACAATCTTGTGCTGTTTGGCAATCTTGTT 679
                      **    *       *    *       *               *    *   **   *  

consensus_9078#0      ATTTGTCTCGATGGAGGAAGTGTGCGCCCAGATC----GTCTGT--CACAGTCTAGTAGC 1173
consensus_9078#1      CTAAGCCTCAATTACTCAAATATATTTATTTNNCTAT-GTTTGTTTCATAACCTA-TACT 1136
consensus_9078#2      CAGAACTTTGTTTTCTCGTAGAATTTGAAAAATTTAGGGACTATGATGAAACTCGGCATT 739
                             *   *                          *  * *     *       *  

consensus_9078#0      TAGCATG--TAGTACCGAAAACTTTTGGCTTATC-GATGTAAAAAATGCTAGTGGA--TG 1228
consensus_9078#1      AAGCAAG--CAGTCNNNNATANNACNGNNNGCTT-GTTATTTTTTACTCCTATGAAAGTA 1193
consensus_9078#2      GGGCGTTTCCGCTCTACCGTGTCGATATGTGCTTTAACTTTGTTTTGTACAATAGTAGTG 799
                        **        *                   *      *            *     * 

consensus_9078#0      CTGAATAAACTTGACTTGAAAAGTCCTACACCGATTGATACGCAGACAGGCACAATCTTG 1288
consensus_9078#1      TGGCNAANGCTNNNTTTGCNNTNNNTTTTNNNNNNNNN---------------------- 1231
consensus_9078#2      TTGTAAAAAGGACCTTGACAATATTTGAGTTCAGAGATCCTCC----------------- 842
                        *   *        *                                            

consensus_9078#0      TGCTGTTTGGCAATCTTGTTCAGAACTTTGTTTTCTCGTAGAATTTGAAAATTTTAGGGA 1348
consensus_9078#1      ------------------------------------------------------------
consensus_9078#2      ------------------------------------------------------------
                                                                                  

consensus_9078#0      CTATGATGAAACTCGGCATTAGGC 1372
consensus_9078#1      ------------------------
consensus_9078#2      ------------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)