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Oryza sativa
cluster # 9116 cluster # 9116       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9116#0 length = 1781 sequences # 3  
consensus_9116#1 length = 890 sequences # 2  
consensus_9116#2 length = 632 sequences # 1  

consensusID : consensus_9116#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1781
fasta sequence
                              [GACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGGTGAGCGACCCATACGGAAATCCTCTCTCGCGTCCCCTCTATACCCGCACCTTCTCTCTTTGCCTTAGGCCCTTAACATTAGCTTCTCTTCTAGATCTGGAAGCATGCTTTACTCTTTACCATATATTTGCTGTTTTTCTTATTATTTTTTTGAAATTGAAGAGCACAGCTCTTCCCCTTCCGTTAAAGGAAGCGAGCATGTTCAGCTACAGAGGAAAAAAAAACGAAAAATGGAAGGGAAGCAACATCAGATCACAAAACAAATAGTGCCATCCCACCATTCTGTATGATCTCCACAAGACAACAACAACATATAACAACTAACAAATTACCTTAAAATTAGTAGTGGGGGCAGTTTGTTTCCAGAAGAAATTCAGAATTAGATACGAGTTTTTAGAACTGGAATGGGAACCCACCTGGTATAAATCGGTCTGATATGTAACTGTAACATCATATTTTAGAATTAGATATGAGTGTTTACCTTTTACAACCGGGATGGGAACCCACCTCGTATAAATTGGTCTGATATGTAACCGTAACATCATATTTTAGAACTTCAGGGTCTAGTTGACTGTTGATGAACTTCTTTGGTCGACCTAGAATAAAGTTGGATTGGGCATTGTGACAGAAAAGGTTATTTCGTAATGTGTGTCCTTAACATCTCATACAATTCTAGGTATGTAGTATCTTATTTCTTGTGGGAAATTTGAGACCTCTAATTCAATTAAACCTGAACATGACTTTTATTTTTCTCAACAGATTTCTAAATTAAATTGATTGACAATGTACAGTAAATACAAATGTATAGAACAAACACAGTCTTTCTGCTCTCTCAGTATCTCCTTTATTTTTAAGTTTGATGTCGTACACCTCCAATTGCCCCATGTTGTTTCCTTGTTTTTCAGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGGGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAAGAAGAAATATAAA]

[+] EMBL AK101574             [GACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGGTGAGCGACCCATACGGAAATCCTCTCTCGCGTCCCCTCTATACCCGCACCTTCTCTCTTTGCCTTAGGCCCTTAACATTAGCTTCTCTTCTAGATCTGGAAGCATGCTTTACTCTTTACCATATATTTGCTGTTTTTCTTATTATTTTTTTGAAATTGAAGAGCACAGCTCTTCCCCTTCCGTTAAAGGAAGCGAGCATGTTCAGCTACAGAGGAAAAAAAAACGAAAAATGGAAGGGAAGCAACATCAGATCACAAAACAAATAGTGCCATCCCACCATTCTGTATGATCTCCACAAGACAACAACAACATATAACAACTAACAAATTACCTTAAAATTAGTAGTGGGGGCAGTTTGTTTCCAGAAGAAATTCAGAATTAGATACGAGTTTTTAGAACTGGAATGGGAACCCACCTGGTATAAATCGGTCTGATATGTAACTGTAACATCATATTTTAGAATTAGATATGAGTGTTTACCTTTTACAACCGGGATGGGAACCCACCTCGTATAAATTGGTCTGATATGTAACCGTAACATCATATTTTAGAACTTCAGGGTCTAGTTGACTGTTGATGAACTTCTTTGGTCGACCTAGAATAAAGTTGGATTGGGCATTGTGACAGAAAAGGTTATTTCGTAATGTGTGTCCTTAACATCTCATACAATTCTAGGTATGTAGTATCTTATTTCTTGTGGGAAATTTGAGACCTCTAATTCAATTAAACCTGAACATGACTTTTATTTTTCTCAACAGATTTCTAAATTAAATTGATTGACAATGTACAGTAAATACAAATGTATAGAACAAACACAGTCTTTCTGCTCTCTCAGTATCTCCTTTATTTTTAAGTTTGATGTCGTACACCTCCAATTGCCCCATGTTGTTTCCTTGTTTTTCAGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTG                                                                                            ]
[+] EMBL CB642814             [  CCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGGTGAGCGACCCATACGGAAATCCTCTCTCGCGTCCCCTCTATACCCGCACCTTCTCTCTTTGCCTTAGGCCCTTAACATTAGCTTCTCTTCTAGATCTGGAAGCATGCTTTACTCTTTACCATATATTTGCTGTTTTTCTTATTATTTTTTTGAAATTGAAGAGCACAGCTCTTCCCCTTCCGTTAAAGGAAGCGAGCATGTTCAGCTACAGAGGAAAAAAAAACGAAAAATGGAAGGGAAGCAACATCAGATCACAAAACAAATAGTGCCATCCCACCATTCTGTATGATCTCCACAAGACAACAACAACATATAACAACTAACAAATTACCTTAAAATTAGTAGTGGGGGCAGTTTGTTTCCAGAAGAAATTCAGAATTAGATACGAGTTTTTAGAACTGGAATGGGAACCCACCTGGTATAAATCGGTCTGATATGTAACTGTAACATCATATTTTAGAATTAGATATGAGTGTTTACCTTTTACAACCGGGATGGGAACCCACCTCGTATAAATTGGTCTGATATGTAACCGTAACATCATATTTTAGAACTTCAGGGTCTAGTTGACTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB642815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTTTGATGTCGTACACCTCCAATTGCCCCATGTTGTTTCCTTGTTTTTCAGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGGGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAAGAAGAAATATAAA]


>consensus_9116#0 GACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGC TCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTC TCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGC GGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGGTGAGCGACCCATA CGGAAATCCTCTCTCGCGTCCCCTCTATACCCGCACCTTCTCTCTTTGCCTTAGGCCCTT AACATTAGCTTCTCTTCTAGATCTGGAAGCATGCTTTACTCTTTACCATATATTTGCTGT TTTTCTTATTATTTTTTTGAAATTGAAGAGCACAGCTCTTCCCCTTCCGTTAAAGGAAGC GAGCATGTTCAGCTACAGAGGAAAAAAAAACGAAAAATGGAAGGGAAGCAACATCAGATC ACAAAACAAATAGTGCCATCCCACCATTCTGTATGATCTCCACAAGACAACAACAACATA TAACAACTAACAAATTACCTTAAAATTAGTAGTGGGGGCAGTTTGTTTCCAGAAGAAATT CAGAATTAGATACGAGTTTTTAGAACTGGAATGGGAACCCACCTGGTATAAATCGGTCTG ATATGTAACTGTAACATCATATTTTAGAATTAGATATGAGTGTTTACCTTTTACAACCGG GATGGGAACCCACCTCGTATAAATTGGTCTGATATGTAACCGTAACATCATATTTTAGAA CTTCAGGGTCTAGTTGACTGTTGATGAACTTCTTTGGTCGACCTAGAATAAAGTTGGATT GGGCATTGTGACAGAAAAGGTTATTTCGTAATGTGTGTCCTTAACATCTCATACAATTCT AGGTATGTAGTATCTTATTTCTTGTGGGAAATTTGAGACCTCTAATTCAATTAAACCTGA ACATGACTTTTATTTTTCTCAACAGATTTCTAAATTAAATTGATTGACAATGTACAGTAA ATACAAATGTATAGAACAAACACAGTCTTTCTGCTCTCTCAGTATCTCCTTTATTTTTAA GTTTGATGTCGTACACCTCCAATTGCCCCATGTTGTTTCCTTGTTTTTCAGAACAACACG GTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAAC CCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATA CAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGT GTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGA TCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAA CATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGA GTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGA GATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATC AGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAG AACTTCTTGACAGTTGGGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTT ACTCCTCAACCGCTGCTTATGAGAAAAAGAAGAAATATAAA



consensusID : consensus_9116#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 890
fasta sequence
                              [GTCAGTAGTCCGTGGACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAA]

[+] EMBL CB657057             [GTCAGTAGTCCGTGGACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAA                                                                                                   ]
[-] EMBL CB657058             [                                                                                                                                                             TGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGAACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAA]


>consensus_9116#1 GTCAGTAGTCCGTGGACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCT GCAGCTGCTGGAGCTCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACT CCGCCACTCCCGTCTCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCG CGAGCAGCTGCGGCGGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCG AACAACACGGTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTAC TCAGAAAACCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCG AGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGA TTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGT CCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAA CTCTGCAAACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGA TGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGA CCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGA CTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGT TATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTG AACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAA



consensusID : consensus_9116#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 632
fasta sequence
                              [AGAGGACGAGACAAGGGGTCAGAAAACCCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAAGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAAATTTCAGCTAAAAAAAAAAAAAA]

[-] EMBL CA762308             [AGAGGACGAGACAAGGGGTCAGAAAACCCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAAGAAATGACTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAAATTTCAGCTAAAAAAAAAAAAAA]


>consensus_9116#2 AGAGGACGAGACAAGGGGTCAGAAAACCCCACTATGAAGTTCTTTCTGTGAATGAAGGTG CTACATATGATGAGGTCCGAGCTGGATACAGGGCTGCTATCCTAAACGCGCATCCTGACA AGTCTCAGGCAAAACTGGATTCACTTGTGTCATCTGTTGAGCATGGGGAATTCTTCAGCG TGCAGAAAGCTTGGGAGGTCCTACGTGATCCCAAATCCAGAACAGAGTATGACAAGCAGC TGCAAACATCAAGGCAGAACTCTGCAAACATTGCTTATGAAATCGAGATCGAAGAAATGA CTGTTGAAAGCACTGGTGATGCTATGGAGTTGATGTATCCATGTAGATGTGGAGATCATT TTTCGATCTTGTCATCTGACCTTGCGGAGATGGGCATTCTGGTCGACGATGATGGGGAAA TATATTTTCAGTCATCTGACTGTGTATCAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTT CACTTAAAACACGGCTGGTTATAAATAGAACTTCTTGACAGTTGTGTAGAAATTGTACTC TTCATCTGGAACAGTTTTGAACATGTTTACTCCTCAACCGCTGCTTATGAGAAAAATATA AAATATAAAATTTCAGCTAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GACCATGGCCGCCGCTTCCCCTCCGCAACGGCGCAGAATCGTTTCTGCAGCTGCTGGAGC 60
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      TCCGCGAGGCGATCTCGGGAGAGATCGCTCCCGTGCCCTCGGCACTCCGCCACTCCCGTC 120
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      TCCTCGCGATTTCGCCCGCCCGCTGCCCGCGCCAATCTCCATCCCGCGAGCAGCTGCGGC 180
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GGCGGCGGCGGCGGCGACCTGTCTCCCTTCCGCCGCATCCTCGCCGGTGAGCGACCCATA 240
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      CGGAAATCCTCTCTCGCGTCCCCTCTATACCCGCACCTTCTCTCTTTGCCTTAGGCCCTT 300
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      AACATTAGCTTCTCTTCTAGATCTGGAAGCATGCTTTACTCTTTACCATATATTTGCTGT 360
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      TTTTCTTATTATTTTTTTGAAATTGAAGAGCACAGCTCTTCCCCTTCCGTTAAAGGAAGC 420
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GAGCATGTTCAGCTACAGAGGAAAAAAAAACGAAAAATGGAAGGGAAGCAACATCAGATC 480
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      ACAAAACAAATAGTGCCATCCCACCATTCTGTATGATCTCCACAAGACAACAACAACATA 540
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      TAACAACTAACAAATTACCTTAAAATTAGTAGTGGGGGCAGTTTGTTTCCAGAAGAAATT 600
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      CAGAATTAGATACGAGTTTTTAGAACTGGAATGGGAACCCACCTGGTATAAATCGGTCTG 660
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      ATATGTAACTGTAACATCATATTTTAGAATTAGATATGAGTGTTTACCTTTTACAACCGG 720
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GATGGGAACCCACCTCGTATAAATTGGTCTGATATGTAACCGTAACATCATATTTTAGAA 780
                                                                                  

consensus_9116#1      ------------------------------------------------------------
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      CTTCAGGGTCTAGTTGACTGTTGATGAACTTCTTTGGTCGACCTAGAATAAAGTTGGATT 840
                                                                                  

consensus_9116#1      ----------------GTCAGTAGTCCGTGGACCATGGCCGCCGCTTCCCCTCCG----C 40
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GGGCATTGTGACAGAAAAGGTTATTTCGTAATGTGTGTCCTTAACATCTCATACAATTCT 900
                                                                                  

consensus_9116#1      AACGGCGCAGAATCGTTTCTGCAGCTG----CTGGAGCTCCGCGAGGCGATCTCGGGAGA 96
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      AGGTATGTAGTATCTTATTTCTTGTGGGAAATTTGAGACCTCTAATTCAATTAAACCTGA 960
                                                                                  

consensus_9116#1      G-ATCGCTCCCGTGCC-CTCGGCACTCCGCCACTCCCGTCTCCTCG-CGATTTCGCCCGC 153
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      ACATGACTTTTATTTTTCTCAACAGATTTCTAAATTAAATTGATTGACAATGTACAGTAA 1020
                                                                                  

consensus_9116#1      CCGC---TGCCCGCGCCAA--------TCTCCATCCCGCGAGCAGCTGCGGCGGCGGC-- 200
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      ATACAAATGTATAGAACAAACACAGTCTTTCTGCTCTCTCAGTATCTCCTTTATTTTTAA 1080
                                                                                  

consensus_9116#1      ----GGCGGCGGCGACCTGT--CTCCCTTCCGCCGCATCCTCG-----CCGAACAACACG 249
consensus_9116#2      ------------------------------------------------------------
consensus_9116#0      GTTTGATGTCGTACACCTCCAATTGCCCCATGTTGTTTCCTTGTTTTTCAGAACAACACG 1140
                                                                                  

consensus_9116#1      GTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAAC 309
consensus_9116#2      ---------------------------------AGAGGACGAGACAAGGGGTCAGAAAAC 27
consensus_9116#0      GTGAACTAGTAATCTAGCATCACCCATGCCCTTAAGCAGCAATATTTCTACTCAGAAAAC 1200
                                                       *     * * *       *********

consensus_9116#1      CC-ACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGAT 368
consensus_9116#2      CCCACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGAT 87
consensus_9116#0      CC-ACTATGAAGTTCTTTCTGTGAATGAAGGTGCTACATATGATGAGGTCCGAGCTGGAT 1259
                      ** *********************************************************

consensus_9116#1      ACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTG 428
consensus_9116#2      ACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTG 147
consensus_9116#0      ACAGGGCTGCTATCCTAAACGCGCATCCTGACAAGTCTCAGGCAAAACTGGATTCACTTG 1319
                      ************************************************************

consensus_9116#1      TGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTG 488
consensus_9116#2      TGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTG 207
consensus_9116#0      TGTCATCTGTTGAGCATGGGGAATTCTTCAGCGTGCAGAAAGCTTGGGAGGTCCTACGTG 1379
                      ************************************************************

consensus_9116#1      ATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAA 548
consensus_9116#2      ATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAA 267
consensus_9116#0      ATCCCAAATCCAGAACAGAGTATGACAAGCAGCTGCAAACATCAAGGCAGAACTCTGCAA 1439
                      ************************************************************

consensus_9116#1      ACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGG 608
consensus_9116#2      ACATTGCTTATGAAATCGAGATCGAAGAAATGACTGTTGAAAGCACTGGTGATGCTATGG 327
consensus_9116#0      ACATTGCTTATGAAATCGAGATCGAGGAAATGACTGTTGAAAGCACTGGTGATGCTATGG 1499
                      ************************* **********************************

consensus_9116#1      AGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGG 668
consensus_9116#2      AGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGG 387
consensus_9116#0      AGTTGATGTATCCATGTAGATGTGGAGATCATTTTTCGATCTTGTCATCTGACCTTGCGG 1559
                      ************************************************************

consensus_9116#1      AGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTAT 728
consensus_9116#2      AGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTAT 447
consensus_9116#0      AGATGGGCATTCTGGTCGACGATGATGGGGAAATATATTTTCAGTCATCTGACTGTGTAT 1619
                      ************************************************************

consensus_9116#1      CAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATA 788
consensus_9116#2      CAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATA 507
consensus_9116#0      CAGCTTCTGTTGTTTTGAGCTGTGGTTCTTGTTCACTTAAAACACGGCTGGTTATAAATA 1679
                      ************************************************************

consensus_9116#1      GAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTT 848
consensus_9116#2      GAACTTCTTGACAGTTGTGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTT 567
consensus_9116#0      GAACTTCTTGACAGTTGGGTAGAAATTGTACTCTTCATCTGGAACAGTTTTGAACATGTT 1739
                      ***************** ******************************************

consensus_9116#1      TACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAA------------------ 890
consensus_9116#2      TACTCCTCAACCGCTGCTTATGAGAAAAATATAAAATATAAAATTTCAGCTAAAAAAAAA 627
consensus_9116#0      TACTCCTCAACCGCTGCTTATGAGAAAAAGAAGAAATATAAA------------------ 1781
                      ***************************** *  *********                  

consensus_9116#1      -----
consensus_9116#2      AAAAA 632
consensus_9116#0      -----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)