These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9120#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1581 fasta sequence [CACCCCATCCAACCCCCACCACCATGTCTCCCAAGAAGGACGCCGGCCTCTCGCCGCCGGTGGCGGCGCCGCCGCCGCTGTCGCTCGCCGGCGTGCCCGTGCTGACGGGGAGCCTACGCCCCGCGGAGTGCGCCGACCTGCTCGGCCTGGTCGCCGGCGTGAAGCGCCCGCTCGAGGACGTCGTGGCGGACTTCCTCGCCCGCATCCAGCCCGAGCGCCGCCTCCGCTTCGGCGCCGCCATAAACTTCGTCCTCAAGGACAAGATGATGCTTCGACCAGCTGAGCGTTTAGTTGCATTCACAATTCTTCATCAAGGTTATTCCTCACAGTTGGAAAATCCCTTTGTTCCTCTAATAATACATGCTGCTTGTGATGAAACCTCTGATAAACCAGAACAGTTGTTTCTCCAACTTCTGTTAAATTCAACTAATGGGGACAACGATAGGGAGATTCTGAAGCATTCTGCTGCAGATTACTTGGAGGAATCTGCTTATGCATCTCAGGTCTTGCTCACCAGAGAGCAGCTTGAAAGACAATATACCTGCAATGAGGTGCAACCCCAGCCTAGCACTGGTAGTTTCAGAGAAGCTACTGTTAGAAGTGTTATTCCTGATCCAGATATTTCTCAAAGCTGCACTGATTCATCAGAGATATCAATAACCAAATCAAATAGAGATAA-TTTGGTCA-CTTGTTTACTTCAACAAACATCACTTGATGGAATTGGTCCTCAGTGGATACGGCCTCCTCCTCCAAGACTTGAAATACTTGATGGAGAGTTGCAGTGGCTGAACCTAGACAACAACCACGAGCTATTGTGGGACAGTAGTATGTGTGCTGATACTAGTCGAGGTGCTGCGATCCGAGATTTAGTTGGAAAAGCTTGTAAAGG-GCACTTTCACCTGCCCAACAGGAGCAAGTTCTGGTGGAATTGGCAAAGGACTGGAAGCTAGTTTATCATTGTGGGATGACACCACAGAAGCTCCCTGACCTTGTGGAACATAATCCACTCGTTGCTGTTGAAGTCCTTTCAAAGTTAATCAACTCGCCTGACATGGATGCTTACTTTGATATTCTTGTGCACATGGAAATGAGCCTACATTCAATGGAAGTTGTAAACAGGCTCACTACAGCAGTAGATCTACCACCAGGATTCATTCATGACTACATCTCAAACTGTATTCGATCATGTCAAAACATTAAGGATAAATACATGCAAAACAGGCTAGTAAGGCTAGTATGTGTTTTCCTACAGAGTCTCATTCGAAACAAGATAATAAATGTGCAAGATCTCTTCATCGAGGTACAGGCGTTCTGCATTGCGTTTTCCCGAATAAGAGAAGCGGCTGGTTTGTTCAGGCTTTTAAAATCGTTAGAGTGAAGAAGGATGTATGGTTTAAACAAAAATTTTCCATGGTGTACATCCATAGTTTTTCATGTTGTACTTTACCGCTAGATCTTGATAGCTGTCGACTTCATAGAATATAGCTCTGTCATGTACTAGTTGTCATCATTGAACTTTACCCCTCATCTC---AAAAAGAAAAAAATAACCCAAAAAAGATTTCAGGNTCNAAAAAAAAAAAA] [+] EMBL AK099694 [CACCCCATCCAACCCCCACCACCATGTCTCCCAAGAAGGACGCCGGCCTCTCGCCGCCGGTGGCGGCGCCGCCGCCGCTGTCGCTCGCCGGCGTGCCCGTGCTGACGGGGAGCCTACGCCCCGCGGAGTGCGCCGACCTGCTCGGCCTGGTCGCCGGCGTGAAGCGCCCGCTCGAGGACGTCGTGGCGGACTTCCTCGCCCGCATCCAGCCCGAGCGCCGCCTCCGCTTCGGCGCCGCCATAAACTTCGTCCTCAAGGACAAGATGATGCTTCGACCAGCTGAGCGTTTAGTTGCATTCACAATTCTTCATCAAGGTTATTCCTCACAGTTGGAAAATCCCTTTGTTCCTCTAATAATACATGCTGCTTGTGATGAAACCTCTGATAAACCAGAACAGTTGTTTCTCCAACTTCTGTTAAATTCAACTAATGGGGACAACGATAGGGAGATTCTGAAGCATTCTGCTGCAGATTACTTGGAGGAATCTGCTTATGCATCTCAGGTCTTGCTCACCAGAGAGCAGCTTGAAAGACAATATACCTGCAATGAGGTGCAACCCCAGCCTAGCACTGGTAGTTTCAGAGAAGCTACTGTTAGAAGTGTTATTCCTGATCCAGATATTTCTCAAAGCTGCACTGATTCATCAGAGATATCAATAACCAAATCAAATAGAGATAA TTTGGTCA CTTGTTTACTTCAACAAACATCACTTGATGGAATTGGTCCTCAGTGGATACGGCCTCCTCCTCCAAGACTTGAAATACTTGATGGAGAGTTGCAGTGGCTGAACCTAGACAACAACCACGAGCTATTGTGGGACAGTAGTATGTGTGCTGATACTAGTCGAGGTGCTGCGATCCGAGATTTAGTTGGAAAAGCTTGTAAAGG GCACTTTCACCTGCCCAACAGGAGCAAGTTCTGGTGGAATTGGCAAAGGACTGGAAGCTAGTTTATCATTGTGGGATGACACCACAGAAGCTCCCTGACCTTGTGGAACATAATCCACTCGTTGCTGTTGAAGTCCTTTCAAAGTTAATCAACTCGCCTGACATGGATGCTTACTTTGATATTCTTGTGCACATGGAAATGAGCCTACATTCAATGGAAGTTGTAAACAGGCTCACTACAGCAGTAGATCTACCACCAGGATTCATTCATGACTACATCTCAAACTGTATTCGATCATGTCAAAACATTAAGGATAAATACATGCAAAACAGGCTAGTAAGGCTAGTATGTGTTTTCCTACAGAGTCTCATTCGAAACAAGATAATAAATGTGCAAGATCTCTTCATCGAGGTACAGGCGTTCTGCATTGCGTTTTCCCGAATAAGAGAAGCGGCTGGTTTGTTCAGGCTTTTAAAATCGTTAGAGTGAAGAAGGATGTATGGTTTAAACAAAAATTTTCCATGGTGTACATCCATAGTTTTTCATGTTGTACTTTACCGCTAGATCTTGATAGCTGTCGACTTCATAGAATATAGCTCTGTCATGTACTAGTTGTCATCATTGAACTTTACCCCTCATCTC AAAAAGAAAAAAATAACCCAAAAAAGA ] [+] EMBL AU172326 [ GTCTCCCAAGAAGGACGCCGGCCTCTCGCCGCCGGTGGCGGCGCCGCCGCCGCTGTCGCTCGCCGGCGTGCCCGTGCTGACGGGGAGCCTACGCCCCGCGGAGTGCGCCGACCTGCTCGGCCTGGTCGCCGGCGTGAAGCGCCCGCTCGAGGACGTCGTGGCGGACTTCCTCGCCCGCATCCAGCCCGAGCGCCGCCTCCGCTTCGGCGCCGCCATAAACTTCGTCCTCAAGGACAAGATGATGCTTCGACCAGCTGAGCGTTTAGTTGCATTCACAATTCTTCATCAAGGTTATTCCTCACAGTTGGAAAATCCCTTTGTTCCTCTAATAATACATGCTGCTTGTGATGAAACCTCTGATAAACCAGAACAGTTGTTTCTCCAACTTCTGTTAAATTCAACTAATGGGGACAACGATAGGGAGATTCTGAAGCATTCTGCTGCAGAT ] [+] EMBL CF322512 [ CCAAGAAGGACGCCGGCCTCTCGCCGCCGGTGGCGGCGCCGCCGCCGCTGTCGCTCGCCGGCGTGCCCGTGCTGACGGGGAGCCTACGCCCCGCGGAGTGCGCCGACCTGCTCGGCCTGGTCGCCGGCGTGAAGCGCCCGCTCGAGGACGTCGTGGCGGACTTCCTCGCCCGCATCCAGCCCGAGCGCCGCCTCCGCTTCGGCGCCGCCATAAACTTCGTCCTCAAGGACAAGATGATGCTTCGACCAGCTGAGCGTTTAGTTGCATTCACAATTCTTCATCAAGGTTATTCCTCACAGTTGGAAAATCCCTTTGTTCCTCTAATAATACATGCTGCTTGTGATGAAACCTCTGATAAACCAGAACAGTTGTTTCTCCAACTTCTGTTAAATTCAACTAATGGGGACAACGATAGGGAGATTCTGAAGCATTCTGCTGCAGATTACTTGGAGGAATCTGCTTATGCATCTCAGGTCTTGCTCACCAGAGAGCAGCTTGAAAGACAATATACCTGCAATGAGGTGCAACCCCAGCCTAGCACTGGTAGTTTCAGAGAAGCTACTGTTAGAAGTGTTATTCCTGATCCAGATATTTCTCANAGCTGCACTGATTCATCAGAGATATCAATAACCAAATCAAATAGAGATAATTTTGGTCACCTTGTTTACTTCAACAAAC ] [+] EMBL CB644964 [ CCGGCCTCTCGCCGCCGGTGGCGGCGCCGCCGCCGCTGTCGCTCGCCGGCGTGCCCGTGCTGACGGGGAGCCTTCGCCCCGCGGAGTGCGCCGACCTGCTCGGCCTGGTCGCCGGCGTGAAGCGCCCGCTCGAGGACGTCGTGGCGGACTTCCTCGCCCGCATCCAGCCCGAGCGCCGCCTCCGCTTCGGCGCCGCCATAAACTTCGTCCTCAAGGACAAGATGATGCTTCGACCAGCTGAGCGTTTAGTTGCATTCACAATTCTTCATCAAGGTTATTCCTCACAGTTGGAAAATCCCTTTGTTCCTCTAATAATACATGCTGCTTGTGATGAAACCTCTGATAAACCAGAACAGTTGTTTCTCCAACTTCTGTTAAATTCAACTAATGGGGACAACGATAGGGAGATTCTGAAGCATTCTGCTGCAGATTACTTGGAGGAATCTGCTTATGCATCTCAGGTCTTGCTCACCAGAGAGCAGCTTGAAAGACAATATACCTGCAATGAGGTGCAACCCCAGCCTAGCACTGGTAGTTTCAGAGAAGCTACTGTTAGAAGTGTTATTCCTGATCCAGATATTTCTCAAAGCTGCACTGATTCATCAGAGATATCAATAACCAAATCAAATAGAGATAA TTTGGTCA CTTGTTTACTTCCACAAACATCACTTG ] [-] EMBL CB625682 [ TCACTTGATGGAATTGGTCCTCAGTGGATACGGCCTCCTCCTCCAAGACTTGAAATACTTGATGGAGAGTTGCAGTGGCTGAACCTAGACAACAACCACGAGCTATTGTGGGACAGTAGTATGTGTGCTGATACTAGTCGAGGTGCTGCGATCCGAGATTTAGTTGGAAAAGCTTGTAAAGGACCACTTTCACCTGCCCAACAGGAGCAAGTTCTGGTGGAATTGGCAAAGGACTGGAAGCTAGTTTATCATTGTGGGATGACACCACAGAAGCTCCCTGACCTTGTGGAACATAATCCACTCGTTGCTGTTGAAGTCCTTTCAAAGTTAATCAACTCGCCTGACATGGATGCTTACTTTGATATTCTTGTGCACATGGAAATGAGCCTACATTCAATGGAAGTTGTAAACAGGCTCACTACAGCAGTAGATCTACCACCAGGATTCATTCATGACTACATCTCAAACTGTATTCGATCATGTCAAAACATTAAGGATAAATACATGCAAAACAGGCTAGTAAGGCTAGTATGTGTTTTCCTACAGAGTCTCATTCGAAACAAGATAATAAATGTGCAAGATCTCTTCATCGAGGTACAGGCGTTCTGCATTGCGTTTTCCCGAATAAGAGAAGCGGCTGGTTTGTTCAGGCTTTTAAAATCATTAGAGTGAAGAAGGATGTATGGTTTAAACAAAAATTTTCCATGGTGTACATCCATAGTTTTTCATGTTGTACTTTACCGCTAGATCTTGATAGCTGTCGACTTCATAGAGTATAGCTCTGTCATGTAGGAGTTGTCATCATTGAACTTTACCCCTCATCTCACTAAAAAGA ] [+] EMBL AU172327 [ nCCAGGATTCATTCATGACTACATCTCAAACTGTATTCGATCATGTCAAAACATTAAGGATAAATACATGCAAAACAGGCTAGTAAGGCTAGTATGTGTTTTCCTACAGAGTNTCATTCGAAACAAGATAATAAATGTGCAAGATCTNTTCATCGAGGTACAGGCGTTNTGCATTGCGTTTTNCCGAATAANAGAAGCGGCTGGTTTGTTCAGGCTTTTAAAATCGTTAGAGTGAAGAAGGATGTATGGTTTAAACAAAAATTTTCCATGGTGTACATCCATAGTTTTTCATGTTGTACTTTACCGCTAGATCTTGATAGCTGTCGACTTCATAGAATATAGCTCTGTCATGTACTAGTTGTCATCATTGAACTTTACCCCTCATCTC AAAAAGAAAAAAATAACCCAAAAAAGATTTCAGGNTCNAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||