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Oryza sativa
cluster # 9126 cluster # 9126       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9126#0 length = 1427 sequences # 3  
consensus_9126#1 length = 1373 sequences # 2  
consensus_9126#2 length = 635 sequences # 1  

consensusID : consensus_9126#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1427
fasta sequence
                              [CCTTGGCGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTTTTGGTTACCTGCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTA-CTCTGATGGGTTGGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAAATTATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTTGAGTATAAAGTTTTA]

[+] EMBL CF276990             [CCTTGGCGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTTTTGGTTACCTGCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTA CTCTGATGGGTTGGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK061110             [      CGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTTTTGGTTACCTGCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTAT GTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGAT GGTT GTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAAATTATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTTGAGTATAAAGTTTTA]
[-] EMBL CF276991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGANAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAAATTATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAaa                                                                   ]


>consensus_9126#0 CCTTGGCGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAA CCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCAT CCATCTGCATTGCTCGCTCGGAGGCCTCAGTTTTGGTTACCTGCAGTAATCATTGTTGGA GAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGG ACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCC AAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCC TCTTATCTGGTTGCCTGTTGTATGGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACA CACTTTCAGAAGTACTCTGATGGGTTGGTGTTTGGAATATGCCTATGGACATTGATCGAG TATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCA CATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTT CCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACT ACTCCGACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGAC TGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAG AAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACG CTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCT TGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATG TTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTC CTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGAT CGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAAATT ATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTT CAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTAT GCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATA CTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGG ATGGTAGAGAGGGCAATCTGCTTCTTAGTTTTGAGTATAAAGTTTTA



consensusID : consensus_9126#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1373
fasta sequence
                              [TGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGATGGTTGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCAC-GGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAGATTATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTT]

[+] EMBL AK069213             [TGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGATGGTTGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCAC GGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAGAAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAGATTATCCTTTCTTGATTTGGCCCTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTT]
[+] EMBL CF303313             [                          GCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTGCTCGCTCGGAGGCCTCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGATGGTTGTGTTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTTTCC CCAGCAGCTGCAGCTATCTTGTCCTTTCCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCACGGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_9126#1 TGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAACCAGCTGCAGCA GCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCATCCATCTGCATTG CTCGCTCGGAGGCCTCAGTAATCATTGTTGGAGAAAATGGTTGCAGAGGCCTTTACAGTA GATTTGAATGAACCTCTTGTATTTCAGGTTGGACATTTAGGTGAGCAGTATCAGGAATGG GTTCACCAACCAATTGTTAGCAAGGAGGGGCCAAGACTTTTTGCCAACGATGTCTTAGAG TTCTTAACACGCACGGAATGGTGGGCAATTCCTCTTATCTGGTTGCCTGTTGTATGTTGG TGCCTGACTAAATCAGTCGAAATGGGACACACACTTTCAGAAGTAGCTCTGATGGTTGTG TTTGGAATATGCCTATGGACATTGATCGAGTATATAATGCATCGATTCCTGTTCCACATA AATACTAAAAGTTACTGGACAAACACAGCACATTACCTTCTTCATGGAATTCATCACAAG CACCCGACTGACGGCCTTCGACTTGTCTTTCCACCAGCAGCTGCAGCTATCTTGTGCTTT CCGTTCTGGAATCTAATCAGGCTAATTACTACTCCGACTACAACTCACGGCGTGTTTGGA GGCGGCCTGTTGGGTTATGTGATGTATGACTGCACACACTACTATCTGCATCATGGGCAG CCGTCATCTGATCCAGGAAAACACCTCAAGAAATACCATCTGAACCATCACTTCAGAATC CAAAACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTTTGGTACATTGCCC TCGACGAAAACCATCGACAAGAAGAGCTCTTGACTTGCGCTGCATTTTGCAAAAAGCCAG AAATGGAGGCAAAGATAAGCATGTATTATGTTCTCCAATGTCCACCTCCTCAAGCCAAAT CCTGTTCAGGTGTTCTAGATTGATTTGCTCCTGCAGAATCCCCATGATTGCATGATTGAT GACAGGCCTGATGGATGATGAATCACTGATCGATTTCTAGTTCTTATTCTCTGAAGATGA ACCGAAGATCCAAGATTGGTCCATGAGATTATCCTTTCTTGATTTGGCCCTCCGAGAATA GATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTT ATGTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCT GAGACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTC CTGTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTT



consensusID : consensus_9126#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence
                              [CGAGACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTNTGGTACATTGCCCTCGACGAAAACCATTGACAAGAAGAGCTCTTGACTTGTGCTGCATTTTGCAAAAAAGCCAGAAATGGAGGCAAAGATAGCATGTATTATGTTCTCCATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCCAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCGTGAAATTTTCCTCTCTTGATTTGGCCCTCCGACTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTATGGTAAGAAATTTGTTACTAGATCAACATGCATGTGTGCAGAGGGTTTTCCAGTTTACCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAGTGTAGTGAGTGCTTGATGATACTAGTACACATTGCTTGTCCTGTAAAAGATTTATTGGCAGTAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTTGAGTATAAAGTTTTAAAAAAAAAA]

[-] EMBL CA762323             [CGAGACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTNTGGTACATTGCCCTCGACGAAAACCATTGACAAGAAGAGCTCTTGACTTGTGCTGCATTTTGCAAAAAAGCCAGAAATGGAGGCAAAGATAGCATGTATTATGTTCTCCATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTGATCGATTTCCAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCGTGAAATTTTCCTCTCTTGATTTGGCCCTCCGACTCCGAGAATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTATGGTAAGAAATTTGTTACTAGATCAACATGCATGTGTGCAGAGGGTTTTCCAGTTTACCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGAGACAAGTGTAGTGAGTGCTTGATGATACTAGTACACATTGCTTGTCCTGTAAAAGATTTATTGGCAGTAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTTGAGTATAAAGTTTTAAAAAAAAAA]


>consensus_9126#2 CGAGACAAGGGGTTCGGAATAACATCGACGCTGTGGGATCATGTGTNTGGTACATTGCCC TCGACGAAAACCATTGACAAGAAGAGCTCTTGACTTGTGCTGCATTTTGCAAAAAAGCCA GAAATGGAGGCAAAGATAGCATGTATTATGTTCTCCATGTCCACCTCCTCAAGCCAAATC CTGTTCAGGTGTTCTAGATTGATTGCTCCTGCAGAATCCCCATGATTGCATGATTGATGA CAGGCCTGATGGATGATGAATCACTGATCGATTTCCAGTTCTTATTCTCTGAAGATGAAC CGAAGATCCAAGATTGGTCCGTGAAATTTTCCTCTCTTGATTTGGCCCTCCGACTCCGAG AATAGATTCCTGTGCAATCTAGTCAGTAGTTGTTCAGGTCATGTAAACGTATGGTAAGAA ATTTGTTACTAGATCAACATGCATGTGTGCAGAGGGTTTTCCAGTTTACCCTATGCATTT GACCTCTGGTCATGTATTGATTCTGAGACAAGTGTAGTGAGTGCTTGATGATACTAGTAC ACATTGCTTGTCCTGTAAAAGATTTATTGGCAGTAATGGATGGTAGAGAGGGCAATCTGC TTCTTAGTTTTGAGTATAAAGTTTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9126#0      CCTTGGCGTTGGTGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAA 60
consensus_9126#1      ------------TGGCCATCACTGAGCTTATCATTGGAGCGGCCTCAGCTGAGCTCCCAA 48
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      CCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCAT 120
consensus_9126#1      CCAGCTGCAGCAGCAGCAGCAGCAGGGGCAGCCTCAGTTCACCGCCCGGCGCCGCCGCAT 108
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      CCATCTGCATTGCTCGCTCGGAGGCCTCAGTTTTGGTTACCTGCAGTAATCATTGTTGGA 180
consensus_9126#1      CCATCTGCATTGCTCGCTCGGAGGCCTCAGT----------------AATCATTGTTGGA 152
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      GAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGG 240
consensus_9126#1      GAAAATGGTTGCAGAGGCCTTTACAGTAGATTTGAATGAACCTCTTGTATTTCAGGTTGG 212
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      ACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCC 300
consensus_9126#1      ACATTTAGGTGAGCAGTATCAGGAATGGGTTCACCAACCAATTGTTAGCAAGGAGGGGCC 272
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      AAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCC 360
consensus_9126#1      AAGACTTTTTGCCAACGATGTCTTAGAGTTCTTAACACGCACGGAATGGTGGGCAATTCC 332
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      TCTTATCTGGTTGCCTGTTGTATGGTTGGTGCCTGACTAAATCAGTCGAAATGGGACACA 420
consensus_9126#1      TCTTATCTGGTTGCCTGTTGTATG-TTGGTGCCTGACTAAATCAGTCGAAATGGGACACA 391
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      CACTTTCAGAAGTA-CTCTGATGGGTTGGTGTTTGGAATATGCCTATGGACATTGATCGA 479
consensus_9126#1      CACTTTCAGAAGTAGCTCTGATGGTT--GTGTTTGGAATATGCCTATGGACATTGATCGA 449
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      GTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGC 539
consensus_9126#1      GTATATAATGCATCGATTCCTGTTCCACATAAATACTAAAAGTTACTGGACAAACACAGC 509
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      ACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTT 599
consensus_9126#1      ACATTACCTTCTTCATGGAATTCATCACAAGCACCCGACTGACGGCCTTCGACTTGTCTT 569
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      TCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTAC 659
consensus_9126#1      TCCACCAGCAGCTGCAGCTATCTTGTGCTTTCCGTTCTGGAATCTAATCAGGCTAATTAC 629
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      TACTCCGACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGA 719
consensus_9126#1      TACTCCGACTACAACTCACGGCGTGTTTGGAGGCGGCCTGTTGGGTTATGTGATGTATGA 689
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      CTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAA 779
consensus_9126#1      CTGCACACACTACTATCTGCATCATGGGCAGCCGTCATCTGATCCAGGAAAACACCTCAA 749
consensus_9126#2      ------------------------------------------------------------
                                                                                  

consensus_9126#0      GAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGAC 839
consensus_9126#1      GAAATACCATCTGAACCATCACTTCAGAATCCAAAACAAGGGGTTCGGAATAACATCGAC 809
consensus_9126#2      -------------------------------CGAGACAAGGGGTTCGGAATAACATCGAC 29
                                                     * * *************************

consensus_9126#0      GCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTC 899
consensus_9126#1      GCTGTGGGATCATGTGTTTGGTACATTGCCCTCGACGAAAACCATCGACAAGAAGAGCTC 869
consensus_9126#2      GCTGTGGGATCATGTGTNTGGTACATTGCCCTCGACGAAAACCATTGACAAGAAGAGCTC 89
                      ***************** *************************** **************

consensus_9126#0      TTGACTTGCGCTGCATTTTGCAAAAA-GCCAGAAATGGAGGCAAAGATAAGCATGTATTA 958
consensus_9126#1      TTGACTTGCGCTGCATTTTGCAAAAA-GCCAGAAATGGAGGCAAAGATAAGCATGTATTA 928
consensus_9126#2      TTGACTTGTGCTGCATTTTGCAAAAAAGCCAGAAATGGAGGCAAAGATA-GCATGTATTA 148
                      ******** ***************** ********************** **********

consensus_9126#0      TGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGC 1018
consensus_9126#1      TGTTCTCCAATGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATTTGC 988
consensus_9126#2      TGTTCTCCA-TGTCCACCTCCTCAAGCCAAATCCTGTTCAGGTGTTCTAGATTGATT-GC 206
                      ********* *********************************************** **

consensus_9126#0      TCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTG 1078
consensus_9126#1      TCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTG 1048
consensus_9126#2      TCCTGCAGAATCCCCATGATTGCATGATTGATGACAGGCCTGATGGATGATGAATCACTG 266
                      ************************************************************

consensus_9126#0      ATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAAA 1138
consensus_9126#1      ATCGATTTCTAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCATGAGA 1108
consensus_9126#2      ATCGATTTCCAGTTCTTATTCTCTGAAGATGAACCGAAGATCCAAGATTGGTCCGTGAAA 326
                      ********* ******************************************** *** *

consensus_9126#0      TTATCCTTTCTTGATTTGGCCCTCCGA------GAATAGATTCCTGTGCAATCTAGTCAG 1192
consensus_9126#1      TTATCCTTTCTTGATTTGGCCCTCCGA------GAATAGATTCCTGTGCAATCTAGTCAG 1162
consensus_9126#2      TTTTCCTCTCTTGATTTGGCCCTCCGACTCCGAGAATAGATTCCTGTGCAATCTAGTCAG 386
                      ** **** *******************      ***************************

consensus_9126#0      TAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTAT-------------------- 1232
consensus_9126#1      TAGTTGTTCAGGTCATGTAAACGTACGGTAAGAAATTTAT-------------------- 1202
consensus_9126#2      TAGTTGTTCAGGTCATGTAAACGTATGGTAAGAAATTTGTTACTAGATCAACATGCATGT 446
                      ************************* ************ *                    

consensus_9126#0      GTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGA 1292
consensus_9126#1      GTGCAGAGGGTTTTCCAGTTTATCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGA 1262
consensus_9126#2      GTGCAGAGGGTTTTCCAGTTTACCCTATGCATTTGACCTCTGGTCATGTATTGATTCTGA 506
                      ********************** *************************************

consensus_9126#0      GACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCT 1352
consensus_9126#1      GACAAAGTGTAGTGATCGCTTGATGATACTAGTACACATTGCTGCCTTCTTTTTTGTCCT 1322
consensus_9126#2      GACAA-GTGTAGTGAGTGCTTGATGATACTAGTACACATTGCT-----------TGTCCT 554
                      ***** *********  **************************           ******

consensus_9126#0      GTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTT 1412
consensus_9126#1      GTAAAAGATTTATTATTGGCAGCAATGGATGGTAGAGAGGGCAATCTGCTT--------- 1373
consensus_9126#2      GTAAAAGATTTAT---TGGCAGTAATGGATGGTAGAGAGGGCAATCTGCTTCTTAGTTTT 611
                      *************   ****** ****************************         

consensus_9126#0      GAGTATAAAGTTTTA--------- 1427
consensus_9126#1      ------------------------
consensus_9126#2      GAGTATAAAGTTTTAAAAAAAAAA 635
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)