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Oryza sativa
cluster # 9133 cluster # 9133       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9133#0 length = 2402 sequences # 4  
consensus_9133#1 length = 554 sequences # 1  
consensus_9133#2 length = 545 sequences # 1  

consensusID : consensus_9133#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2402
fasta sequence
                              [CAATTTCTTCTGGAAACCCTCCGCGGCACGGGCGAAATGGGGCGGCGGCGGCGATTCGCGCAGCTCGCCACCACCAGCGACGACGACGACGACGACGCCCCCGCCGCCGACGCGCCGCCCAAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCAGGCCCCAAGAAGCCGAAGCAGCGCCGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTCGAGGAGGACGACCTGGAGCTCGAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGAGGAGCGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAAGCGCCCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGAGGAGGCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCACCGGCAGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTCGAGTACGAGGGCAACACCTTCGAGCTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGCAAGGAGAAACCTTATGTCGCCATCCTCAAGGATATAACAGAAACTGAGGGAAGCTTATCAGTAACTGGTCAGTGGTTTTATAGACCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGGAAAGCAAGTGACACGAGGGAGTTATTTTATAGTTTCCATATTGATGATGTGCCAGCAGAGTCAGTTATGCACAAGTGTGTAGTCCATTTCATTCCTCAACATAAGAAAATTCCCAGCCGGAAGGAACACCCTGGATTCATTGTCCAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGGAACCTAACAGACAAAGATTATGAGGATAACAAGCAACATGAGATTGATCTTCTCGTTAAGAAAACAATAGACCGTATTGGACAGCTTTCTGATATTGAACCTGCAGATGCTCCTGGTGACAACAATGATCAGCTCTCAAACAAGCGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGATGTTTCAAGAGATGATGCTTTAGCAGGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAATTATGCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCTTGATAAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGCTGATCCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGAAAAATCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTATGAAGCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAACATCAAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGTCCTGTTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATCTGAACCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCACGATGTGTAAGATGTGCAGAAAAGGAAGTAGGTGTATCTGATATTATTCATGCTGGTCATGGAGATCGCTATCAGCTCGAATGTAACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGATGCCATCACAACCCTGACAGTGGATACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCACCATGGGCAACAGCCAAGTTCGATGTCATGGAGAAGCAGCTCACGAGCCCACGGGATCATCAGCCGGACAAGCCGTTGGCCGATGCTCTCCACAAGAGCGCGGCA-CCGTACATGCCCA-CG-CTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACA-AACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTACTTCCCATCAATTCTGCTCGAGCTGTATCTGTTTGTACCCAAATGATACGGGCATCAGGAGTATGCAACCCAACTATGACCAATAAAAAAAA]

[+] EMBL AK103167             [CAATTTCTTCTGGAAACCCTCCGCGGCACGGGCGAAATGGGGCGGCGGCGGCGATTCGCGCAGCTCGCCACCACCAGCGACGACGACGACGACGACGCCCCCGCCGCCGACGCGCCGCCCAAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCAGGCCCCAAGAAGCCGAAGCAGCGCCGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTCGAGGAGGACGACCTGGAGCTCGAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGAGGAGCGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAAGCGCCCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGAGGAGGCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCACCGGCAGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTCGAGTACGAGGGCAACACCTTCGAGCTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGCAAGGAGAAACCTTATGTCGCCATCCTCAAGGATATAACAGAAACTGAGGGAAGCTTATCAGTAACTGGTCAGTGGTTTTATAGACCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGGAAAGCAAGTGACACGAGGGAGTTATTTTATAGTTTCCATATTGATGATGTGCCAGCAGAGTCAGTTATGCACAAGTGTGTAGTCCATTTCATTCCTCAACATAAGAAAATTCCCAGCCGGAAGGAACACCCTGGATTCATTGTCCAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGGAACCTAACAGACAAAGATTATGAGGATAACAAGCAACATGAGATTGATCTTCTCGTTAAGAAAACAATAGACCGTATTGGACAGCTTTCTGATATTGAACCTGCAGATGCTCCTGGTGACAACAATGATCAGCTCTCAAACAAGCGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGATGTTTCAAGAGATGATGCTTTAGCAGGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAATTATGCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCTTGATAAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGCTGATCCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGAAAAATCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTATGAAGCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAACATCAAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGTCCTGTTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATCTGAACCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCACGATGTGTAAGATGTGCAGAAAAGGAAGTAGGTGTATCTGATATTATTCATGCTGGTCATGGAGATCGCTATCAGCTCGAATGTAACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGATGCCATCACAACCCTGACAGTGGATACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCACCATGGGCAACAGCCAAGTTCGATGTCATGGAGAAGCAGCTCACGAGCCCACGGGATCATCAGCCGGACAAGCCGTTGGCCGATGCTCTCCACAAGAGCGCGGCA CCGTACATGCCCA CG CTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACA AACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTACTTCCCATCAATTCTGCTCGAGCTGTATCTGTTTGTACCCAAATGATACGGGCATCAGGAGTATGCAACCCAACTATGACCAATAAAAAAAA]
[+] EMBL AU102213             [                                                                                                                                                                                GCGCCGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTNGAGGAGGACGACCTGGAGCTCGAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGAGGAGCGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAAGCGCCCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGAGGAGGCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCACCGGCAGGGGGAAGAAGCAGCGCAA CATTACACCTCCTTCGAGTACGAGGGCAACACCTTCGAGCTCGAGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF322998             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTCCTATAGATGTTTCAAGAGATGATGCTTTAGCAGGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAATTATGCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCTTGATAAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGCTGATCCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGAAAAATCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTATGAAGCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAACATCAAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGTCCTGTTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATCTGAACCTGAAGAATAAAGGAAGTTGCAGATGACTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI809092             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTCATGGAGAA CAGCTCACGAGCCCCCGGGATCATCAGCCGGACAAGCCGTTGGCTGATGCTCTCCACAAGAGCGCGGCACCCGTACATGCCCACCGCCTGGAGAACCAGAAATCGTTCGGCAAGCCCAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCCCGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCATAACTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACACAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTAaaaaaaaaa                                                                                                                                           ]


>consensus_9133#0 CAATTTCTTCTGGAAACCCTCCGCGGCACGGGCGAAATGGGGCGGCGGCGGCGATTCGCG CAGCTCGCCACCACCAGCGACGACGACGACGACGACGCCCCCGCCGCCGACGCGCCGCCC AAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCAGGCCCCAAGAAGCCGAAGCAGCGC CGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTCGAGGAGGACGACCTGGAGCTC GAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGAGGAG CGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAAGCGC CCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGAGGAG GCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCACCGGC AGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTCGAGTACGAGGGCAACACCTTCGAG CTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGCAAGGAGAAACCTTATGTCGCCATC CTCAAGGATATAACAGAAACTGAGGGAAGCTTATCAGTAACTGGTCAGTGGTTTTATAGA CCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGGAAAGCAAGTGACACGAGGGAGTTA TTTTATAGTTTCCATATTGATGATGTGCCAGCAGAGTCAGTTATGCACAAGTGTGTAGTC CATTTCATTCCTCAACATAAGAAAATTCCCAGCCGGAAGGAACACCCTGGATTCATTGTC CAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGGAACCTAACAGACAAAGATTATGAG GATAACAAGCAACATGAGATTGATCTTCTCGTTAAGAAAACAATAGACCGTATTGGACAG CTTTCTGATATTGAACCTGCAGATGCTCCTGGTGACAACAATGATCAGCTCTCAAACAAG CGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGATGTTTCAAGAGATGATGCTTTAGCA GGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAATTAT GCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCTTGAT AAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGCTGAT CCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGAAAAA TCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTATGAA GCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAACATC AAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGTCCTG TTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATCTGAA CCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCACGATGTGTAAGATGTGCAGAAAAG GAAGTAGGTGTATCTGATATTATTCATGCTGGTCATGGAGATCGCTATCAGCTCGAATGT AACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGATGCCATCACAACCCTGACAGTGGAT ACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCACCATGGGCAACAGCCAAGTTCGAT GTCATGGAGAAGCAGCTCACGAGCCCACGGGATCATCAGCCGGACAAGCCGTTGGCCGAT GCTCTCCACAAGAGCGCGGCACCGTACATGCCCACGCTGGAGAAGCAGAAATCGTTCGGC AAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAGACGG TCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGAGCA CGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAA TTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAACTCT AGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCA TTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTT TTTGGCTACTGCTCATGTTTTGTGTGTGTACTTCCCATCAATTCTGCTCGAGCTGTATCT GTTTGTACCCAAATGATACGGGCATCAGGAGTATGCAACCCAACTATGACCAATAAAAAA AA



consensusID : consensus_9133#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 554
fasta sequence
                              [CCCCATGGGCAACAGCCAAGTTCGATTTCATGGAGAANCAGCTCACGANCCCACGGGATCCATCAGCCGGANAACCCGTTGGCCGATGCTCTCCACAAGAGCNCGGCACCGTACATNCCCACGCTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTNCTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU056142             [CCCCATGGGCAACAGCCAAGTTCGATTTCATGGAGAANCAGCTCACGANCCCACGGGATCCATCAGCCGGANAACCCGTTGGCCGATGCTCTCCACAAGAGCNCGGCACCGTACATNCCCACGCTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTNCTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9133#1 CCCCATGGGCAACAGCCAAGTTCGATTTCATGGAGAANCAGCTCACGANCCCACGGGATC CATCAGCCGGANAACCCGTTGGCCGATGCTCTCCACAAGAGCNCGGCACCGTACATNCCC ACGCTGGAGAAGCAGAAATCGTTCGGCAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCA GCAGCTGGCCACGAGTAGATCAGACGGTCCACACGCACTACACCTCTCGTCAGAACTAGT AGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAG TTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAG GGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGT GTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGT ACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTNCTGCTAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAA



consensusID : consensus_9133#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [GGNCCGGCNCNTGGGCCAAANCCAATTTGANTTCNGGGGGNGCGGTTAANGGCCCAGGGGATTTTNACCGGAAAACCCNGTGGCNGATTTTTTCAANAAGNGGGGGCCCGNAAATNCCNANCGTGGNGGAGCAGAATTNGTTCGGCAAGAACAAGCCAGAAGANCNTTGTTGGGGCCAGCAGTTGGCCAAGGAGNAGATCAGACGGTCCAACACGCANAACACCTTTTGTCAGAATTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTAAAAAAAAA]

[+] EMBL AA753886             [GGNCCGGCNCNTGGGCCAAANCCAATTTGANTTCNGGGGGNGCGGTTAANGGCCCAGGGGATTTTNACCGGAAAACCCNGTGGCNGATTTTTTCAANAAGNGGGGGCCCGNAAATNCCNANCGTGGNGGAGCAGAATTNGTTCGGCAAGAACAAGCCAGAAGANCNTTGTTGGGGCCAGCAGTTGGCCAAGGAGNAGATCAGACGGTCCAACACGCANAACACCTTTTGTCAGAATTAGTAGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTAAAAAAAAA]


>consensus_9133#2 GGNCCGGCNCNTGGGCCAAANCCAATTTGANTTCNGGGGGNGCGGTTAANGGCCCAGGGG ATTTTNACCGGAAAACCCNGTGGCNGATTTTTTCAANAAGNGGGGGCCCGNAAATNCCNA NCGTGGNGGAGCAGAATTNGTTCGGCAAGAACAAGCCAGAAGANCNTTGTTGGGGCCAGC AGTTGGCCAAGGAGNAGATCAGACGGTCCAACACGCANAACACCTTTTGTCAGAATTAGT AGCTAGCTAGACACGATTAGAAGAGCACGCGCACCCACGGTTCGCATCGTCATTAGGGAG TTTCAGAGATTACGTGTACAGATGTAATTGTGTTTTGTATGTCGTGTACTACCATCTGAG GGAGGCTGAGCAGATCAGACAAACTCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGT GTTTTAACTTGCATCACTGTCAATGCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGT ACATCGTGAGGGTGTCAATGGATCGTTTTTGGCTACTGCTCATGTTTTGTGTGTGTAAAA AAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9133#0      CAATTTCTTCTGGAAACCCTCCGCGGCACGGGCGAAATGGGGCGGCGGCGGCGATTCGCG 60
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CAGCTCGCCACCACCAGCGACGACGACGACGACGACGCCCCCGCCGCCGACGCGCCGCCC 120
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AAGGCGAAGCCCCCGCCGCCGCCCTCCTCCTCCTCAGGCCCCAAGAAGCCGAAGCAGCGC 180
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CGCCTTTCCTCCGCGGCGGCCGACGACGACGACGACGTCGAGGAGGACGACCTGGAGCTC 240
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GAGGAGGAGGAGGAGGACGAGAAGGATCTGGAGGAGATGCGGAGGAACGAGGAGGAGGAG 300
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CGGCGGGAGGAGACGCAGACCCGCCGCCGCCGCCGCCGCCGGGGCCGCAAGCCCAAGCGC 360
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CCCGCCGAGGAGAGCGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGCCAAGGCGGAGGAG 420
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GCCCGCGAGGAGGAGAACACCGAGGCGGTCCCCATCGGGGAGCCCGTCAAGATCACCGGC 480
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AGGGGGAAGAAGCAGCGCAAGCATTACACCTCCTTCGAGTACGAGGGCAACACCTTCGAG 540
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CTCGAGGACCCGGTGCTGCTCACGCCTGAGGATAGCAAGGAGAAACCTTATGTCGCCATC 600
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CTCAAGGATATAACAGAAACTGAGGGAAGCTTATCAGTAACTGGTCAGTGGTTTTATAGA 660
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CCAGAAGAGGCTGACAAAAAGGGTGGGGGAAGCTGGAAAGCAAGTGACACGAGGGAGTTA 720
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      TTTTATAGTTTCCATATTGATGATGTGCCAGCAGAGTCAGTTATGCACAAGTGTGTAGTC 780
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CATTTCATTCCTCAACATAAGAAAATTCCCAGCCGGAAGGAACACCCTGGATTCATTGTC 840
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CAAAAGGTCTATGACACAGTTGCGAAGAAACTTTGGAACCTAACAGACAAAGATTATGAG 900
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GATAACAAGCAACATGAGATTGATCTTCTCGTTAAGAAAACAATAGACCGTATTGGACAG 960
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CTTTCTGATATTGAACCTGCAGATGCTCCTGGTGACAACAATGATCAGCTCTCAAACAAG 1020
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CGAGGACTGCGGAAGAGACCTGTGCTTCCTATAGATGTTTCAAGAGATGATGCTTTAGCA 1080
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GGCAAATCAGAGCAATTTGGAAAAGCAGAGACACCTGGAAGTGATAAGCTAAAGAATTAT 1140
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GCCACCCTTGTCAAGTATAAAGCTGTTACTGGTGATCAATATCGTGATAGGTGGCTTGAT 1200
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AAATTAGTGGATACTATTCCACTAACATCAAAGGAAAGTGCTGGGGCTTCTCATGCTGAT 1260
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CCTGGTGGTGCTACCAAAAGTTCAACTAATGGTTCATCTGCAAAGGAAGACAATGAAAAA 1320
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      TCTTATTCACCTGATGTGATTGTTTCAATAATGGCCTCCTTAGAAAGATCTACTTATGAA 1380
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GCTCTTGGTTCTGACTTCCAGAAGTATAACCAGAAATTGAGACAGTTACTGTTCAACATC 1440
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AAGAATAGCCCTGTACTACGGAACCGGCTGATGAACAAGGAGCTTGATCCTCCAGTCCTG 1500
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      TTAACAATGTCTCCTGACGAACTAAAGGTTGGCTTGACAGCAGCAGAGAGAACATCTGAA 1560
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      CCTGAAGAATCAAGGAAGTTGCAGATGACTGATGCACGATGTGTAAGATGTGCAGAAAAG 1620
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      GAAGTAGGTGTATCTGATATTATTCATGCTGGTCATGGAGATCGCTATCAGCTCGAATGT 1680
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AACGCCTGTGGACACTCGTGGTTCTCGTCCAGAGATGCCATCACAACCCTGACAGTGGAT 1740
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      ACTCCAACAAGTGCTGGTGGGAGCGTGGGCACGGCACCATGGGCAACAGCCAAGTTCGAT 1800
consensus_9133#1      ----------------------------------CCCCATGGGCAACAGCCAAGTTCGAT 26
consensus_9133#2      ----------------------------GGNCCGGCNCNTGGGCCAAANCCAA-TTTGAN 31
                                                           * ***** * * **** ** ** 

consensus_9133#0      GTCATGGAGAAGCAGCTCACGAGCCCACGGGATC-ATCAGCCGGACAAGCCGTTGGCCGA 1859
consensus_9133#1      TTCATGGAGAANCAGCTCACGANCCCACGGGATCCATCAGCCGGANAACCCGTTGGCCGA 86
consensus_9133#2      TTCN-GGGGGNGCGGTTAANG-GCCCAGGGGATT--TTNACCGGAAAACCCNGTGGCNGA 87
                       **  ** *   * * * * *  **** *****   *   ***** ** **  **** **

consensus_9133#0      TGCTCTCCACAAGAGCGCGGCACCGTACATGCCCACGCTGGAGAAGCAGAAATCGTTCGG 1919
consensus_9133#1      TGCTCTCCACAAGAGCNCGGCACCGTACATNCCCACGCTGGAGAAGCAGAAATCGTTCGG 146
consensus_9133#2      TTTTTTCAANAAGNGGG-GGC-CCGNAAATNCCNANCGTGGNGGAGCAGAATTNGTTCGG 145
                      *  * ** * *** *   *** *** * ** ** *   *** * ******* * ******

consensus_9133#0      CAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACG-AGTAGATCAGAC 1978
consensus_9133#1      CAAGCACAAGCCAGACGAGCCCTCGTCGGCGCCAGCAGCTGGCCACG-AGTAGATCAGAC 205
consensus_9133#2      CAAGAACAAGCCAGAAGANCN-TTGTTGGGGCCAGCAGTTGGCCAAGGAGNAGATCAGAC 204
                      **** ********** ** *  * ** ** ******** ****** * ** *********

consensus_9133#0      GGTCCA-CACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGA 2037
consensus_9133#1      GGTCCA-CACGCACTACACCTCTCGTCAGAACTAGTAGCTAGCTAGACACGATTAGAAGA 264
consensus_9133#2      GGTCCAACACGCANAACACCTTTTGTCAGAATTAGTAGCTAGCTAGACACGATTAGAAGA 264
                      ****** ******  ****** * ******* ****************************

consensus_9133#0      GCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATG 2097
consensus_9133#1      GCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATG 324
consensus_9133#2      GCACGCGCACCCACGGTTCGCATCGTCATTAGGGAGTTTCAGAGATTACGTGTACAGATG 324
                      ************************************************************

consensus_9133#0      TAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAAC 2157
consensus_9133#1      TAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAAC 384
consensus_9133#2      TAATTGTGTTTTGTATGTCGTGTACTACCATCTGAGGGAGGCTGAGCAGATCAGACAAAC 384
                      ************************************************************

consensus_9133#0      TCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAAT 2217
consensus_9133#1      TCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAAT 444
consensus_9133#2      TCTAGGTTGGCATCCTCCTGTCGCCTCTAATCGTGTGTTTTAACTTGCATCACTGTCAAT 444
                      ************************************************************

consensus_9133#0      GCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATC 2277
consensus_9133#1      GCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATC 504
consensus_9133#2      GCATTTCAGTGCTGTGGACGCAGCCGGTACTCCTGTACATCGTGAGGGTGTCAATGGATC 504
                      ************************************************************

consensus_9133#0      GTTTTTGGCTACTGCTCATGTTTTGTGTGTGTACTTCCCATCAATTCTGCTCGAGCTGTA 2337
consensus_9133#1      GTTTTTGGCTNCTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------- 554
consensus_9133#2      GTTTTTGGCTACTGCTCATGTTTTGTGTGTGTAAAAAAAAA------------------- 545
                      ********** ***** *              *      *                    

consensus_9133#0      TCTGTTTGTACCCAAATGATACGGGCATCAGGAGTATGCAACCCAACTATGACCAATAAA 2397
consensus_9133#1      ------------------------------------------------------------
consensus_9133#2      ------------------------------------------------------------
                                                                                  

consensus_9133#0      AAAAA 2402
consensus_9133#1      -----
consensus_9133#2      -----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)