These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9150#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1659 fasta sequence [TGTGATCCCAAACTTCCACTATCACAGCATTTGGAGGGATCCTAGCAAATTTAGTGATATTTATGATGAGGAACACTTCGTCCAACGATTGAAAAATGATGTCCGAGTAGTTGACAAGGTGCCTGAGTTTATTATGGAGAGGTTTGGTCACAATTTGAGTAATGTGTTTAATTTCAAGATAAAGGCTTGGTCTTCTATCCGATACTACAAAGAAGCTGTTCTTCCTAAGTTGATCGAAGAAAGGCTTATAAGGATATCACCTTTTGCAAACCGACTGTCCTTTGATGCTCCATCAGCTGTTCAACGGTTGAGATGTCTGGCTAATTTTGAAGCCTTAAAGTTTTCTAAGCCGATCACAACTTTATCTGACATTTTAGTATCTCGAATGAGAGAAAAAAGTGCCGAAAACAATGGGAAATATGTAGCGGTGCATCTCCGTTTTGAAGAGGATATGGTTGCATTCTCTTGTTGTGTCTTCGACGGGGGTGAAAAGGAGAAGAAGGAACTGGATGCAGCCAGGGAGAGGGGTTGGAGAGGAAAGTTTACTAGGCCAGGACGTGTAATAAGGCCTGGAGCAATAAGGATGAATGGGAAATGTCCACTTACACCTTTGGAGGTTGGGTTAATGCTTCGCGGGATGGGTTTCAGCAATAACACCGCGATCTATTTGGCTTCTGGGAGGATATATAAATCAGAGAAGAACATGGCACCTCTCCTTGAAATGTTTCCTCTCTTGCAGACAAAAGAAACATTGGCATCAGATGAAGAACTTGCTCCATTCAAGAATTTCTCTTCAAGGATGGCAGCTATCGATTACACAGTATGTGTTCATAGTGAAGTTTTCGTGACTACCCAAGGTGGAAATTTTCCTCATTTCCTTCTTGGTCATAGGAGATACATTTATGGTGGTCATTCGAAGACAATTAAGCCTGATAAAAGAAGATTAGCCATACTCTTCGATAGTCCACGTATCGGATGGAAGTCACTGAAACGTCAGTTGGTGAATATGAGAACACACAGCGATGCCAAGGGTATTGAAATGAAAAGAGCAAATG-AATC-TATATACACCTTTCCATGCCCCGACTGCATGTGCCGCTCAAACAAATCAGAACACTCTAAATCCATCCAGGCTAGATAGCATCTACTAGTCTTGACTTGATTGACTGACCTTGATTCTTTTTGGTACCATAGCATGTGCTCATTCTTTGCTTGCCGTCTGGTGGTGTGATGTCTGTCCGGTCTCCAAGCACCCTACTGCAGCATTGCTCATCTATTACACTCCCCAGGTGGATTTTGCGGATATATTAGATTCATATTAGCTAAGCTAATCCTGGGGCTAACAATACACCGATCTGAGTCTCAATAGATGTGTCTAACCGTTTCTAGGTCTAATACCCTGACAATGTAGTGCCAGTCCGCTTGATGTAATAGTAGTTCCCTTGTACATTTCTCAGCTAGGAAGAAATTTGTCATACAAATTTTGAGAAGAGGAACAATGCTTATTCTGATATAATTTATTGATCCTTTCATCTGAAAGCTAGCTCTTTGTCTAACTATTCTTTTGATTATTGTATCAAGGGAGGGAGGTTTTCCTTCTTCTTTCATTTGTACAATTTGCCAATTTCAGTTTGAGTCAGAAACAGGCAAACAGCTAAAAGT] [+] EMBL AK060210 [TGTGATCCCAAACTTCCACTATCACAGCATTTGGAGGGATCCTAGCAAATTTAGTGATATTTATGATGAGGAACACTTCGTCCAACGATTGAAAAATGATGTCCGAGTAGTTGACAAGGTGCCTGAGTTTATTATGGAGAGGTTTGGTCACAATTTGAGTAATGTGTTTAATTTCAAGATAAAGGCTTGGTCTTCTATCCGATACTACAAAGAAGCTGTTCTTCCTAAGTTGATCGAAGAAAGGCTTATAAGGATATCACCTTTTGCAAACCGACTGTCCTTTGATGCTCCATCAGCTGTTCAACGGTTGAGATGTCTGGCTAATTTTGAAGCCTTAAAGTTTTCTAAGCCGATCACAACTTTATCTGACATTTTAGTATCTCGAATGAGAGAAAAAAGTGCCGAAAACAATGGGAAATATGTAGCGGTGCATCTCCGTTTTGAAGAGGATATGGTTGCATTCTCTTGTTGTGTCTTCGACGGGGGTGAAAAGGAGAAGAAGGAACTGGATGCAGCCAGGGAGAGGGGTTGGAGAGGAAAGTTTACTAGGCCAGGACGTGTAATAAGGCCTGGAGCAATAAGGATGAATGGGAAATGTCCACTTACACCTTTGGAGGTTGGGTTAATGCTTCGCGGGATGGGTTTCAGCAATAACACCGCGATCTATTTGGCTTCTGGGAGGATATATAAATCAGAGAAGAACATGGCACCTCTCCTTGAAATGTTTCCTCTCTTGCAGACAAAAGAAACATTGGCATCAGATGAAGAACTTGCTCCATTCAAGAATTTCTCTTCAAGGATGGCAGCTATCGATTACACAGTATGTGTTCATAGTGAAGTTTTCGTGACTACCCAAGGTGGAAATTTTCCTCATTTCCTTCTTGGTCATAGGAGATACATTTATGGTGGTCATTCGAAGACAATTAAGCCTGATAAAAGAAGATTAGCCATACTCTTCGATAGTCCACGTATCGGATGGAAGTCACTGAAACGTCAGTTGGTGAATATGAGAACACACAGCGATGCCAAGGGTATTGAAATGAAAAGAGCAAATG AATC TATATACACCTTTCCATGCCCCGACTGCATGTGCCGCTCAAACAAATCAGAACACTCTAAATCCATCCAGGCTAGATAGCATCTACTAGTCTTGACTTGATTGACTGACCTTGATTCTTTTTGGTACCATAGCATGTGCTCATTCTTTGCTTGCCGTCTGGTGGTGTGATGTCTGTCCGGTCTCCAAGCACCCTACTGCAGCATTGCTCATCTATTACACTCCCCAGGTGGATTTTGCGGATATATTAGATTCATATTAGCTAAGCTAATCCTGGGGCTAACAATACACCGATCTGAGTCTCAATAGATGTGTCTAACCGTTTCTAGGTCTAATACCCTGACAATGTAGTGCCAGTCCGCTTGATGTAATAGTAGTTCCCTTGTACATTTCTCAGCTAGGAAGAAATTTGTCATACAAATTTTGAGAAGAGGAACAATGCTTATTCTGATATAATTTATTGATCCTTTCATCTGAAAGCTAGCTCTTTGTCTAACTATTCTTTTGATTATTGTATCAAGGGAGGGAGGTTTTCCTTCTTCTTTCATTTGTACAATTTGCCAATTTCAGTTTGAGTCAGAAACAGGCAAACAGCTAAAAGT] [+] EMBL CF323900 [ AACGATTGAAAAATGATGTCCGAGTAGTTGACAAGGTGCCTGAGTTTATTATGGAGAGGTTTGGTCACAATTTGAGTAATGTGTTTAATTTCAAGATAAAGGCTTGGTCTTCTATCCGATACTACAAAGAAGCTGTTCTTCCTAAGTTGATCGAAGAAAGGCTTATAAGGATATCACCTTTTGCAAACCGACTGTCCTTTGATGCTCCATCAGCTGTTCAACGGTTGAGATGTCTGGCTAATTTTGAAGCCTTAAAGTTTTCTAAGCCGATCACAACTTTATCTGACATTTTAGTATCTCGAATGAGAGAAAAAAGTGCCGAAAACAATGGGAAATATGTAGCGGTGCATCTCCGTTTTGAAGAGGATATGGTTGCATTCTCTTGTTGTGTCTTCGACGGGGGTGAAAAGGAGAAGAAGG ] [+] EMBL CB671243 [ GTGCCTGAGTTTATTATGGAGAGGTTTGGTCACAATTTGAGTAATGTGTTTAATTTCAAGATAAAGGCTTGGTCTTCTATCCGATACTACAAAGAAGCTGTTCTTCCTAAGTTGATCGAAGAAAGGCTTATAAGGATATCACCTTTTGCAAACCGACTGTCCTTTGATGCTCCATCAGCTGTTCAACGGTTGAGATGTCTGGCTAATTTTGAAGCCTTAAAGTTTTCTAAGCCGATCACAACTTTATCTGACATTTTAGTATCTCGAATGAGAGAAAAAAGTGCCGAAAACAATGGGAAATATGTAGCGGTGCATCTCCGTTTTGAAGAGGATATGGTTGCATTCTCTTGTTGTGTCTTCGACGGGGGTGAAAAGGAGAAGAAGGAACTGGATGCAGCCAGGGAGAGGGGTTGGAGAGGAAAGTTTACTAGGCCAGGACGTGTAATAAGGCCTGGAGCAATAAGGATGAATGGGAAATGTCCACTTACACCTTTGGAGGTTGGGTTAATGCTTCGCGGGATGGGTTTCAGCAATAACACCGCGATCTATTTGGCTTCTGGGAGGATATATAAATCAGAGAAGAACATGGCACCTCTCCTTGAAATGTTTCCTCTCTTGCAGACAAAAGAAACATTGGCATCAGATGAAGAACTTGCTCCATTCAAGAATTTCTCTTCAAGGATGGCAGCTATCGATTACACAGTATGTGTTCATAGTGAAGTTTTCGTGACTACCCAAGGTGGAAATTTTCCTCATTTCCTTCTTGGTCATAGGAGATACATTT ] [-] EMBL CB671244 [ AAACATTGGCATCAGATGAAGAACTTGCTCCATTCAAGAATTTCTCTTCAAGGATGGCAGCTATCGATTACACAGTATGTGTTCATAGTGAAGTTTTCGTGACTACCCAAGGTGGAAATTTTCCTCATTTCCTTCTTGGTCATAGGAGATACATTTATGGTGGTCATTCGAAGACAATTAAGCCTGATAAAAGAAGATTAGCCATACTCTTCGATAGTCCACGTATCGGATGGAAGTCACTGAAACGTCAGTTGGTGAATATGAGAACACACAGCGATGCCAAGGGTATTGAAATGAAAAGAGCAAATG AATC TATATACACCTTTCCATGCCCCGACTGCATGTGCCGCTCAAACAAATCAGAACACTCTAAATCCATCCAGGCTAGATAGCATCTACTAGTCTTGACTTGATTGACTGACCTTGATTCTTTTTGGTACCATAGCATGTGCTCATTCTTTGCTTGCCGTCTGGTGGTGTGATGTCTGTCCGGTCTCCAAGCACCCTACTGCAGCATTGCTCATCTATTACACTCCCCAGGTGGATTTTGCGGATATATTAGATTCATATTAGCTAAGCTAATCCTGGGGCTAACAATACACCGATCTGAGTCTCAATAGATGTGTCTAACCGTTTCTAGGTCTAATACCCTGACAATGTAGTGCCAGTCCGCTTGATGTAATAGTAGTTCCCTTGTACATTTCTCAGCTAGGAAGAAATTTGTCATACAAAGTTTGAGAAGAGGAACAATGCTTATTCTGATAT ] [+] EMBL CF324581 [ AAGAACTTGCTCCATTCAAGAATTTCTCTTCAAGGATGGCAGCTATCGATTACACAGTATGTGTTCATAGTGAAGTTTTCGTGACTACCCAAGGTGGAAATTTTCCTCATTTCCTTCTTGGTCATAGGAGATACATTTATGGTGGTCATTCGAAGACAATTAAGCCTGATAAAAGAAGATTAGCCATACTCTTCGATAGTCCACGTATCGGATGGAAGTCACTGAAACGTCAGTTGGTGAATATGAGAACACACAGCGATGCCAAGGGTATTGAAATGAAAAGAGCAAATG AATC TATATACACCTTTCCATGCCCCGACTGCATGTGCCGCTCAAACAAATCAGAACACTCTAAATCCATCCAGGCTAGATAGCATCTACTAGTCTTGACTTGATTGACTGACCTTGATTCTTTTTGGTACCATAGCATGTGCT ] [+] EMBL AU166944 [ cnAAATGAAATCTTATATACACCTTTCCATGCCCCGACTGCATGTGCCGCTCAAACAAATCAGANCACTCTAAATCCATCCAGGCTAGATAGCATCTACTAGTCTTGACTTGATTGACTGACCTTGATTCTTTTTGGTACCATAGCATGTGCTCATTCTTTGCTTGCCGTCTGGTGGTGTGATGTCTGTCCGGTCTCCAAGCACCCTACTGCAGCATTGCTCATCTATTACACTCCCCAGGTGGATTTTGCGGATATATTAGATTCATATTAGCTAAGCTAATCCTGGGGCTAACAATACACCGATCTGAGTCTCAATAGATGTGTCTAACCGTTTCTAGGTCTAATACCCTGACAATGTAGTGCCAGTCCGCTTGATGTAATAGTAGTTCCCTTGTACATTTCTCAGCTAGGAAGAAATTTGTCATACAAATTTTGAGAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||