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Oryza sativa
cluster # 9165 cluster # 9165       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9165#0 length = 1745 sequences # 4  
consensus_9165#1 length = 692 sequences # 1  
consensus_9165#2 length = 402 sequences # 1  

consensusID : consensus_9165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1745
fasta sequence
                              [CCGCCGGCCCACTCGCTCACTGCGCCGCCGCTCATCGGCGCGACGCTCCGGCGGCCGGCGCTCGCGGGCTCCGAGCCGGTCGCCGCCTCCCTCTGCTCTCCTCTCCGTCGCCCTCTCCTCCAGGCCGCCCCCTCCGGTGCTCCACCGTCGCCCTCCCTCGCTCCGGCAGCTCACGCTCGGGGGCTGGCCGCCGTCGCCCTCTCCGGCAGGGTTCAGAATTGCATTTGGTACGATGGAAGAGGGCAGCAACTATTATCTTGTCAGGAAGGGGGAGATGGTAGCTGTTTACAAATCTTTAAATGATTGCCAGGCTCAAATTTGCTCATCGGTATCTGGTCCTGCTGCAAGTGCCTACAAGGGTAACTCTTGGAGCAGAGAAAAGGAGGAATACCTCTCTTCGCGTGGGTTAAGTAATGCTACATATGTAATCAATGCAGCTGAACTTAGGGAAGATCTATTTGGTACCCTTATCCCCTGTACTTTTCAGGAGATAACTGTTTCTAGTTCAAATCAATCAGCTCTAAATCATACAGGTGTCCTTAACAATACAAGATATCAGCCTGGGGCACAATCCGTGGATCTGAACTACGATGCCGTGGGATCTGGTCAAGCCTCAGCTGAGCACTATAGCCAGCGTATTAACCAAGGCTACTCTGTTCGGGGACAAGCATTTAACAGGCTGGAATCAAGACCTAGTTCTTCCAGCCATTTCTCACCGAATAATCTTGATCAGAGTGGAACTGTTGATGCACAACCTCTCTCGAAACAATATATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGAAAAGCGGGTGCTGGGGCTGTGCTTATGACTGAAGATGG--GAGTGATATCTCGACTTCGCGAGGGTCTTGGTATTGTTACCAATAATGTTGCTGAATACCGGGGCCTGATCTTAGGATTGAGATATGCTATTAGGCATGGTTTCAAGAAAATCATAGTATATGGCGACTCTCAACTAGTCTGTTATCAGGTGAAAGGTACATGGCAAACGAAGAACCAGAACATGATGGAACTGTGCAAGGAAGTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATGCCGAGGCAGATCGCCAAGCAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAAAAAAAAAAAAAAAAAAAACTGAGACTAGC]

[+] EMBL AK071427             [CCGCCGGCCCACTCGCTCACTGCGCCGCCGCTCATCGGCGCGACGCTCCGGCGGCCGGCGCTCGCGGGCTCCGAGCCGGTCGCCGCCTCCCTCTGCTCTCCTCTCCGTCGCCCTCTCCTCCAGGCCGCCCCCTCCGGTGCTCCACCGTCGCCCTCCCTCGCTCCGGCAGCTCACGCTCGGGGGCTGGCCGCCGTCGCCCTCTCCGGCAGGGTTCAGAATTGCATTTGGTACGATGGAAGAGGGCAGCAACTATTATCTTGTCAGGAAGGGGGAGATGGTAGCTGTTTACAAATCTTTAAATGATTGCCAGGCTCAAATTTGCTCATCGGTATCTGGTCCTGCTGCAAGTGCCTACAAGGGTAACTCTTGGAGCAGAGAAAAGGAGGAATACCTCTCTTCGCGTGGGTTAAGTAATGCTACATATGTAATCAATGCAGCTGAACTTAGGGAAGATCTATTTGGTACCCTTATCCCCTGTACTTTTCAGGAGATAACTGTTTCTAGTTCAAATCAATCAGCTCTAAATCATACAGGTGTCCTTAACAATACAAGATATCAGCCTGGGGCACAATCCGTGGATCTGAACTACGATGCCGTGGGATCTGGTCAAGCCTCAGCTGAGCACTATAGCCAGCGTATTAACCAAGGCTACTCTGTTCGGGGACAAGCATTTAACAGGCTGGAATCAAGACCTAGTTCTTCCAGCCATTTCTCACCGAATAATCTTGATCAGAGTGGAACTGTTGATGCACAACCTCTCTCGAAACAATATATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGAAAAGCGGGTGCTGGGGCTGTGCTTATGACTGAAGATGG  GAGTGATATCTCGACTTCGCGAGGGTCTTGGTATTGTTACCAATAATGTTGCTGAATACCGGGGCCTGATCTTAGGATTGAGATATGCTATTAGGCATGGTTTCAAGAAAATCATAGTATATGGCGACTCTCAACTAGTCTGTTATCAGGTGAAAGGTACATGGCAAACGAAGAACCAGAACATGATGGAACTGTGCAAGGAAGTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATGCCGAGGCAGATCGCCAAGCAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTGTGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACT                                                                                                                                                                                                                ]
[+] EMBL AK101347             [                          GCCGCTCATCGGCGCGACGCTCCGGCGGCCGGCGCTCGCGGGCTCCGAGCCGGTCGCCGCCTCCCTCTGCTCTCCTCTCCGTCGCCCTCTCCTCCAGGCCGCCCCCTCCGGTGCTCCACCGTCGCCCTCCCTCGCTCCGGCAGCTCACGCTCGGGGGCTGGCCGCCGTCGCCCTCTCCGGCAGGGTTCAGAATTGCATTTGGTACGATGGAAGAGGGCAGCAACTATTATCTTGTCAGGAAGGGGGAGATGGTAGCTGTTTACAAATCTTTAAATGATTGCCAGGCTCAAATTTGCTCATCGGTATCTGGTCCTGCTGCAAGTGCCTACAAGGGTAACTCTTGGAGCAGAGAAAAGGAGGAATACCTCTCTTCGCGTGGGTTAAGTAATGCTACATATGTAATCAATGCAGCTGAACTTAGGGAAGATCTATTTGGTACCCTTATCCCCTGTACTTTTCAGGAGATAACTGTTTCTAGTTCAAATCAATCAGCTCTAAATCATACAGGTGTCCTTAACAATACAAGATATCAGCCTGGGGCACAATCCGTGGATCTGAACTACGATGCCGTGGGATCTGGTCAAGCCTCAGCTGAGCACTATAGCCAGCGTATTAACCAAGGCTACTCTGTTCGGGGACAAGCATTTAACAGGCTGGAATCAAGACCTAGTTCTTCCAGCCATTTCTCACCGAATAATCTTGATCAGAGTGGAACTGTTGATGCACAACCTCTCTCGAAACAATATATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGAAAAGCGGGTGCTGGGGCTGTGCTTATGACTGAAGATGGGAGAGTGATATCTCGACTTCGCGAGGGTCTTGGTATTGTTACCAATAATGTTGCTGAATACCGGGGCCTGATCTTAGGATTGAGATATGCTATTAGGCATGGTTTCAAGAAAATCATAGTATATGGCGACTCTCAACTAGTCTGTTATCAGGTGAAAGGTACATGGCAAACGAAGAACCGGAACATGATGGAACTGTGCAAGGAAGTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATGCCGAGGCAGATCGCCAAGCAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCC                                   ]
[-] EMBL CF325065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAAAAAAAAAAAAAAAAAAAACTGAGACTAGC]
[-] EMBL CF325040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAAAAAAAAAAAAAAAAAAAACTGAGACTAGC]


>consensus_9165#0 CCGCCGGCCCACTCGCTCACTGCGCCGCCGCTCATCGGCGCGACGCTCCGGCGGCCGGCG CTCGCGGGCTCCGAGCCGGTCGCCGCCTCCCTCTGCTCTCCTCTCCGTCGCCCTCTCCTC CAGGCCGCCCCCTCCGGTGCTCCACCGTCGCCCTCCCTCGCTCCGGCAGCTCACGCTCGG GGGCTGGCCGCCGTCGCCCTCTCCGGCAGGGTTCAGAATTGCATTTGGTACGATGGAAGA GGGCAGCAACTATTATCTTGTCAGGAAGGGGGAGATGGTAGCTGTTTACAAATCTTTAAA TGATTGCCAGGCTCAAATTTGCTCATCGGTATCTGGTCCTGCTGCAAGTGCCTACAAGGG TAACTCTTGGAGCAGAGAAAAGGAGGAATACCTCTCTTCGCGTGGGTTAAGTAATGCTAC ATATGTAATCAATGCAGCTGAACTTAGGGAAGATCTATTTGGTACCCTTATCCCCTGTAC TTTTCAGGAGATAACTGTTTCTAGTTCAAATCAATCAGCTCTAAATCATACAGGTGTCCT TAACAATACAAGATATCAGCCTGGGGCACAATCCGTGGATCTGAACTACGATGCCGTGGG ATCTGGTCAAGCCTCAGCTGAGCACTATAGCCAGCGTATTAACCAAGGCTACTCTGTTCG GGGACAAGCATTTAACAGGCTGGAATCAAGACCTAGTTCTTCCAGCCATTTCTCACCGAA TAATCTTGATCAGAGTGGAACTGTTGATGCACAACCTCTCTCGAAACAATATATGGTATG CTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGAAAAGCGGGTGCTGGGGCTGT GCTTATGACTGAAGATGGGAGTGATATCTCGACTTCGCGAGGGTCTTGGTATTGTTACCA ATAATGTTGCTGAATACCGGGGCCTGATCTTAGGATTGAGATATGCTATTAGGCATGGTT TCAAGAAAATCATAGTATATGGCGACTCTCAACTAGTCTGTTATCAGGTGAAAGGTACAT GGCAAACGAAGAACCAGAACATGATGGAACTGTGCAAGGAAGTGAGAAAGCTCAAAGAAA ACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATGCCGAGGCAGATCGCC AAGCAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCT AGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTA ATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCA ACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAA CCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGG CCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACT TGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTG CGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCA AGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTT GTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAAAAAAAAAAAAAAAAAAAACTGAGA CTAGC



consensusID : consensus_9165#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [GNAANTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATCCCGAGGCAGATCGCCAAGCAAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGATCTTCAAAATGCAAAGGTCTTTTATGTTAAAAA]

[+] EMBL AU094011             [GNAANTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATCCCGAGGCAGATCGCCAAGCAAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCGATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGATCTTCAAAATGCAAAGGTCTTTTATGTTAAAAA]


>consensus_9165#1 GNAANTGAGAAAGCTCAAAGAAAACTTCGTCTCATTTGAGATCAACCACATTCGACGGGA ATGGAATCCCGAGGCAGATCGCCAAGCAAAACATAGCTATTACTCTTTCCAGTGGTGTGG TCTCTGAGGAGCGTGGCGATGGCTAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGA GTAACTAGTATATGTAGTTAACTAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTA ATATATGTAGCTAACTAATTAGCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGC CTCTGGGAGTCCAGCTTGCAGTAACCTGTTGAAGATGATCCGTGTGAAGGGTACACCTCG ATGATGAACACTTGAGTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTT ATTCTTGGTGTAAGCTTCACTACTTGGGCCTTCACATAGGCGTTGCCCAAGTTAGTAGAC TGGCAGCGATGAACTGATTGAGTGCGATGATGCAATTGCTAGTTTGCCATGTGTTGGGTT TTGGTTTTGGGGGGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGT AAACTGAGCTATAAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAT CTTCAAAATGCAAAGGTCTTTTATGTTAAAAA



consensusID : consensus_9165#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence
                              [AATTTAATAATCTATGTACTTGAGGCCATTAACCCTTAAAGTTGTTTCAATTGTGCTCAGATCCTGCATGTAAGTTTTCCACTTATTAATCCAACTGTCACATCTACAGGCAAACTGTGGAGCTAGAAATTTATGTTGCCATAGGGTTACCTCCTCACCTCACCTTGCATAGAAGTCATCTACTTGGTCATTAATACATGCTATTTTACTCGTATAAATGTTTTGCACCTTATCTGTTTTTTCAGATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGNAAAGCGGGTGCTGGGGCTGTGCTTATGACTGAAGATGGGAGAGTGGTATACTTAAGTACTTAATGCACTTCAAAGTTTAATGGTTGGGTTTCACTTTTATTTCATGTGC]

[+] EMBL C72569               [AATTTAATAATCTATGTACTTGAGGCCATTAACCCTTAAAGTTGTTTCAATTGTGCTCAGATCCTGCATGTAAGTTTTCCACTTATTAATCCAACTGTCACATCTACAGGCAAACTGTGGAGCTAGAAATTTATGTTGCCATAGGGTTACCTCCTCACCTCACCTTGCATAGAAGTCATCTACTTGGTCATTAATACATGCTATTTTACTCGTATAAATGTTTTGCACCTTATCTGTTTTTTCAGATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGNAAAGCGGGTGCTGGGGCTGTGCTTATGACTGAAGATGGGAGAGTGGTATACTTAAGTACTTAATGCACTTCAAAGTTTAATGGTTGGGTTTCACTTTTATTTCATGTGC]


>consensus_9165#2 AATTTAATAATCTATGTACTTGAGGCCATTAACCCTTAAAGTTGTTTCAATTGTGCTCAG ATCCTGCATGTAAGTTTTCCACTTATTAATCCAACTGTCACATCTACAGGCAAACTGTGG AGCTAGAAATTTATGTTGCCATAGGGTTACCTCCTCACCTCACCTTGCATAGAAGTCATC TACTTGGTCATTAATACATGCTATTTTACTCGTATAAATGTTTTGCACCTTATCTGTTTT TTCAGATGGTATGCTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGNAAAGCGG GTGCTGGGGCTGTGCTTATGACTGAAGATGGGAGAGTGGTATACTTAAGTACTTAATGCA CTTCAAAGTTTAATGGTTGGGTTTCACTTTTATTTCATGTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9165#0      CCGCCGGCCCACTCGCTCACTGCGCCGCCGCTCATCGGCGCGACGCTCCGGCGGCCGGCG 60
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      CTCGCGGGCTCCGAGCCGGTCGCCGCCTCCCTCTGCTCTCCTCTCCGTCGCCCTCTCCTC 120
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      CAGGCCGCCCCCTCCGGTGCTCCACCGTCGCCCTCCCTCGCTCCGGCAGCTCACGCTCGG 180
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      GGGCTGGCCGCCGTCGCCCTCTCCGGCAGGGTTCAGAATTGCATTTGGTACGATGGAAGA 240
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      GGGCAGCAACTATTATCTTGTCAGGAAGGGGGAGATGGTAGCTGTTTACAAATCTTTAAA 300
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TGATTGCCAGGCTCAAATTTGCTCATCGGTATCTGGTCCTGCTGCAAGTGCCTACAAGGG 360
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TAACTCTTGGAGCAGAGAAAAGGAGGAATACCTCTCTTCGCGTGGGTTAAGTAATGCTAC 420
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      ATATGTAATCAATGCAGCTGAACTTAGGGAAGATCTATTTGGTACCCTTATCCCCTGTAC 480
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TTTTCAGGAGATAACTGTTTCTAGTTCAAATCAATCAGCTCTAAATCATACAGGTGTCCT 540
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TAACAATACAAGATATCAGCCTGGGGCACAATCCGTGGATCTGAACTACGATGCCGTGGG 600
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      ATCTGGTCAAGCCTCAGCTGAGCACTATAGCCAGCGTATTAACCAAGGCTACTCTGTTCG 660
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      GGGACAAGCATTTAACAGGCTGGAATCAAGACCTAGTTCTTCCAGCCATTTCTCACCGAA 720
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TAATCTTGATCAGAGTGGAACTGTTGATGCACAACCTCTCTCGAAACAATATATGGTATG 780
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      CTTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGAAAAGCGGGTGCTGGGGCTGT 840
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      GCTTATGACTGAAGATGGGAGTGATATCTCGACTTCGCGAGGGTCTTGGTATTGTTACCA 900
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      ATAATGTTGCTGAATACCGGGGCCTGATCTTAGGATTGAGATATGCTATTAGGCATGGTT 960
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TCAAGAAAATCATAGTATATGGCGACTCTCAACTAGTCTGTTATCAGGTGAAAGGTACAT 1020
consensus_9165#1      ------------------------------------------------------------
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      GGCAAACGAAGAACCAGAACATGATGGAACTGTGCAAGGAAGTGAGAAAGCTCAAAGAAA 1080
consensus_9165#1      -------------------------------------GNAANTGAGAAAGCTCAAAGAAA 23
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      ACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATGCCGAGGCAGATCGCC 1140
consensus_9165#1      ACTTCGTCTCATTTGAGATCAACCACATTCGACGGGAATGGAATCCCGAGGCAGATCGCC 83
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      AAGCAAA-CATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGC 1199
consensus_9165#1      AAGCAAAACATAGCTATTACTCTTTCCAGTGGTGTGGTCTCTGAGGAGCGTGGCGATGGC 143
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      TAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAAC- 1258
consensus_9165#1      TAGCCTTCTCCGGCTATAACCCTTCTAGATAATGGGAGTAACTAGTATATGTAGTTAAC- 202
consensus_9165#2      -----------------------------------AATTTAATAATCTATGTACTTGAGG 25
                                                          * * * ** * ****** ** *  

consensus_9165#0      TAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTA-GCTAACTAATTA 1317
consensus_9165#1      TAATTAGCAGGTGGAGACCTATATGATGGGAGTAACTAATATATGTA-GCTAACTAATTA 261
consensus_9165#2      CCATTAACCCTTAAAGTTGTTTCAATTGTGCTCAGATCCTGCATGTAAGTTTTCCACTTA 85
                        **** *   *  **   * *    ** *   *  *  *  ***** * *  * * ***

consensus_9165#0      GCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAG 1377
consensus_9165#1      GCAACCAGAGACCTATGTTTTGCATCTTGCTGCTCTGGCCTCTGGGAGTCCAGCTTGCAG 321
consensus_9165#2      TTAATCCAACTGTCACATCTACAGGCAAACTGT----GGAGCTAGAAATTTATGTTGCCA 141
                        ** *  *     *  * *     *   ***     *   ** * * *  *  ****  

consensus_9165#0      TA-----ACCTGTTGAAGATGATCCGTGTGAAGGGTACAC-CTCGATGATGAACACTTGA 1431
consensus_9165#1      TA-----ACCTGTTGAAGATGATCCGTGTGAAGGGTACAC-CTCGATGATGAACACTTGA 375
consensus_9165#2      TAGGGTTACCTCCTCACCTCACCTTGCATAGAAGTCATCTACTTGGTCATTAATACATGC 201
                      **     ****  * *         *  *  * *  *    ** * * ** ** ** ** 

consensus_9165#0      GTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGC 1491
consensus_9165#1      GTTACCAGGCCTCATTTTGGAGCACTATGTGAGCTCCAGCTAGTTATTCTTGGTGTAAGC 435
consensus_9165#2      TATTTTA---CTCGTATAAATGT----TTTGCACCTTATCTGTTTTTTCAGATGGTATGC 254
                        *   *   *** * *    *     * **  *   * **  ** ***     *** **

consensus_9165#0      TT-CACTACTTGGGCCTT-CACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAA 1549
consensus_9165#1      TT-CACTACTTGGGCCTT-CACATAGGCGTTGCCCAAGTTAGTAGACTGGCAGCGATGAA 493
consensus_9165#2      TTACTTCACTTCGATGGTGCATCGAAAGGAAATCCAGGNAAAGCGGGTGCTGGGGCTGTG 314
                      ** *   **** *    * **   *   *    *** *  *   *  **   * * **  

consensus_9165#0      CTGATTGAGTGCGATGATGCAATTGC-TAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGG 1608
consensus_9165#1      CTGATTGAGTGCGATGATGCAATTGC-TAGTTTGCCATGTGTTGGGTTTTGGTTTTGGGG 552
consensus_9165#2      CTTATGACTGAAGATGGGAGAGTGGTATACTTAAGTACTTAATGCACTTCAAAGTTTAAT 374
                      ** **       ****    * * *  ** **    *  *  **   **     **    

consensus_9165#0      GGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTAT 1668
consensus_9165#1      GGCTAAGAACCAAGTTTGGCCTCTTTACCTACGAAAGCATCTGCATGTAAACTGAGCTAT 612
consensus_9165#2      GGTTGGGTTTCACTTTTATTTCATGTGC-------------------------------- 402
                      ** *  *   **  ***      * * *                                

consensus_9165#0      AAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGAAAAAAAAAAAAAA 1728
consensus_9165#1      AAGCTCCATTTTGTCAGGCTTGTGAATGAAATTGAAAACTCCGCGGATCTTCAAAATGCA 672
consensus_9165#2      ------------------------------------------------------------
                                                                                  

consensus_9165#0      AAAAAACTG-AGACTAGC-- 1745
consensus_9165#1      AAGGTCTTTTATGTTAAAAA 692
consensus_9165#2      --------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)