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Oryza sativa
cluster # 9189 cluster # 9189       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9189#0 length = 1457 sequences # 3  
consensus_9189#1 length = 1151 sequences # 2  
consensus_9189#2 length = 605 sequences # 1  

consensusID : consensus_9189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1457
fasta sequence
                              [GGCGGACTCCAAAAACCCTTCCTCAAACCCTCGCCCCCACAACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCTGTATCCTATTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTAGGAGCTCCGATTCACATCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAG---ATAATTTTCTGGAAGCGAAATGCTTCTGTTCAAACGGATGATCTGTTGTCATTGCAAAAAAGAGAAGTTCATTAGGATAGTTTACTGCACCCATCGTCCTAAAATATAGGCCATAGGGTGCTGTTTGTTATAGCTCTAGATGCTGGATTTTTGGAGTTGGGGGTACTTTTAGCTCTAAAAATTCATAGATCTGGATCCGGGATTACATTGATAACATTTAGATGAATTATTTTATTCTTATTTAAACTAAAACATAAAATTTT]

[+] EMBL AK071844             [GGCGGACTCCAAAAACCCTTCCTCAAACCCTCGCCCCCACAACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCTGTATCCTATTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTAGGAGCTCCGATTCACATCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAG   ATAATTTTCTGGAAGCGAAATGCTTCTGTTCAAACGGATGATCTGTTGTCATTGCAAAAAAGAGAAGTTCATTAGGATA                                                                                                                                                                                        ]
[+] EMBL AK099295             [        CCAAAAACCCTTCCTCAAACCCTCGCCCCCACAACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCTGTATCCTATTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTAGGAGCTCCGATTCACATCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAG   ATAATTTTCTGGAAGCGAAAT                                                                                                                                                                                                                                                  ]
[+] EMBL CA764318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGTGTTGATGCTGCTATTTTCCGAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTGGGAGCTCCGATTCATATTCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCATCTGGCTAGTTTGTTTTGTAGTTGAGCTAAAAAGATAATAATTTTCTGGAAGGGAAATGCTTCTGTTCGAACGGATGATCTGTTGTCATTGCAAAAAAGAGAAGTTCATTAGGATAGTTTACTGCACCCATCGTCCTAAAATATAGGCCATAGGGTGCTGTTTGTTATAGCTCTAGATGCTGGATTTTTGGAGTTGGGGGTACTTTTAGCTCTAAAAATTCATAGATCTGGATCCGGGATTACATTGATAACATTTAGATGAATTATTTTATTCTTATTTAAACTAAAACATAAAATTTT]


>consensus_9189#0 GGCGGACTCCAAAAACCCTTCCTCAAACCCTCGCCCCCACAACGCCCCGCGACAGGAGGA AGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCT CGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGT TTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCTGTATCCTA TTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAG GCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTA TAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTG CTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTC CCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTG TTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTC TGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAG GCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTT TCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTCGATGTTTTGAAGACAAGATTGA TGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTAC GAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCA TTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGA ACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTT CCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTAGGAGCTCCGATTCACAT CCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTAT AATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAGATAATT TTCTGGAAGCGAAATGCTTCTGTTCAAACGGATGATCTGTTGTCATTGCAAAAAAGAGAA GTTCATTAGGATAGTTTACTGCACCCATCGTCCTAAAATATAGGCCATAGGGTGCTGTTT GTTATAGCTCTAGATGCTGGATTTTTGGAGTTGGGGGTACTTTTAGCTCTAAAAATTCAT AGATCTGGATCCGGGATTACATTGATAACATTTAGATGAATTATTTTATTCTTATTTAAA CTAAAACATAAAATTTT



consensusID : consensus_9189#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1151
fasta sequence
                              [CTGGACTGAAGGAGTAGATAACACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCCGTATCCTATTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACAGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTTGATGTTTTGAAGACAAGATTGATGGTTCAGGAACAAGCAAAGCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTTTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTCTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAAAACTATGAAAGGGGAATGATTTTGTGTTGATGCTGCTATTTTCCGAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTGGGAGCTCCGATTCATATTCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTAAAAAAAAAAAA]

[+] EMBL CF293354             [CTGGACTGAAGGAGTAGATAACACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCCGTATCCTATTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CA762533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAGACTGCACCTGATGCTGTTCGCCTTATCATCCGTAAAGAAGGAATCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATTTGATGCTATTCAATTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACAGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCTTGATGTTTTGAAGACAAGATTGATGGTTCAGGAACAAGCAAAGCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTTTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTCTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAAAACTATGAAAGGGGAATGATTTTGTGTTGATGCTGCTATTTTCCGAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTGGGAGCTCCGATTCATATTCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTAAAAAAAAAAAA]


>consensus_9189#1 CTGGACTGAAGGAGTAGATAACACGCCCCGCGACAGGAGGAAGAAGCTTCTCGTCTGATT TTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCTCGCGGTGAGCCATGGGAGA AGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGTTTGAGGGTGTAATAGCTGG AGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCCGTATCCTATTGATACAATAAAAACCAG GCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAGGCTTGTATGCTGGGTTAGG TGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTATAGGAGTGTATGAACCAAC CAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTGCTGTGGCTCATTTGACTGC AGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTCCCACAGAGGTGGTTAAACA AAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTGTTCGCCTTATTATCCGTAA AGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTCTGTTGCGAGATCTACCATT TGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAA GCGAGACTTGAAAGACAGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGG GGCTATAACAACACCCCTTGATGTTTTGAAGACAAGATTGATGGTTCAGGAACAAGCAAA GCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTTTACGAGAGGAAGGTGCTGGTGC TTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTT TGGTGTTCTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAAA ACTATGAAAGGGGAATGATTTTGTGTTGATGCTGCTATTTTCCGAGGATGTCTACTGATA TGTGTGCTCGATCAATTAATTTTGGGAGCTCCGATTCATATTCTTGTCAATCCCATCCGA ATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTA AAAAAAAAAAA



consensusID : consensus_9189#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 605
fasta sequence
                              [CTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTCACATCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAGATAATTTTCTGGAAGCGAAATGCTTCTGTTCAAAAA]

[-] EMBL CF293353             [CTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCAATTACTGGGGCTATAACAACACCCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTCACATCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAGATAATTTTCTGGAAGCGAAATGCTTCTGTTCAAAAA]


>consensus_9189#2 CTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAGGCTATAAACTG GCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTTTCGCTGGCGCA ATTACTGGGGCTATAACAACACCCCCTCGATGTTTTGAAGACAAGATTGATGGTTCAGGG ACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTACGAGAGGAAGG TGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGCATTGGTGGATC CATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGGAACAGCCGTAA AGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTTTCCCAGGATGT CTACTGATATGTGTGCTCGATCAATTAATTCACATCCTTGTCAATCCCATCCGAATCTTG TATTTTGCTAGAGCATTACATGGGGTTAAAGTTATAATTTCTGAATTTCTTTTCGTCTGG CTAGCTTGTTTTGTACTTGAGCTAAAAAGATAATTTTCTGGAAGCGAAATGCTTCTGTTC AAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9189#0      GGCGGACTCCAAAAACCCTTCCTCAAACCCTCGCCCCCACAACGCCCCGCGACAGGAGGA 60
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      -------------------CTGGACTGAAGGAGTAGATAACACGCCCCGCGACAGGAGGA 41
                                                                                  

consensus_9189#0      AGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCT 120
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      AGAAGCTTCTCGTCTGATTTTGTTCCTGGTGACTGAAAGCAGCAGAGAAGCAGATAGGCT 101
                                                                                  

consensus_9189#0      CGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGT 180
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      CGCGGTGAGCCATGGGAGAAGGCGGAGACGGGAGGTCCTTCAATTTTCTTCAAGTTCTGT 161
                                                                                  

consensus_9189#0      TTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCTGTATCCTA 240
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      TTGAGGGTGTAATAGCTGGAGGTGCTGCCGGTGTTGTTGTTGAGACAGCTCCGTATCCTA 221
                                                                                  

consensus_9189#0      TTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAG 300
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      TTGATACAATAAAAACCAGGCTTCAGGCTGCGAAAGGTGGAAGTAAAATTCAATGGAAAG 281
                                                                                  

consensus_9189#0      GCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTA 360
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      GCTTGTATGCTGGGTTAGGTGGAAATATTGCTGGTGTTCTCCCGGCTTCTGCAATCTTTA 341
                                                                                  

consensus_9189#0      TAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTG 420
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      TAGGAGTGTATGAACCAACCAAAAGAAAACTGCTAGAAATGTTTCCTGAAAATTTGAGTG 401
                                                                                  

consensus_9189#0      CTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTC 480
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      CTGTGGCTCATTTGACTGCAGGGGCAATTGGAGGTGCTGCATCTTCTCTTATTCGTGTTC 461
                                                                                  

consensus_9189#0      CCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTG 540
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      CCACAGAGGTGGTTAAACAAAGGATGCAAATGAGTCAATTCAAGACTGCACCTGATGCTG 521
                                                                                  

consensus_9189#0      TTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTC 600
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      TTCGCCTTATTATCCGTAAAGAAGGATTCAAAGGTCTTTATGCTGGCTATGGTTCCTTTC 581
                                                                                  

consensus_9189#0      TGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAG 660
consensus_9189#2      -----------CTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAG 49
consensus_9189#1      TGTTGCGAGATCTACCATTTGATGCTATTCAGTTTTGCATATATGAGCAACTTCGAATAG 641
                                 *************************************************

consensus_9189#0      GCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTT 720
consensus_9189#2      GCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACGGAGAGAATGCACTTATTGGTGCTT 109
consensus_9189#1      GCTATAAACTGGCGGCAAAGCGAGACTTGAAAGACAGAGAGAATGCACTTATTGGTGCTT 701
                      *********************************** ************************

consensus_9189#0      TCGCTGGCGCAATTACTGGGGCTATAACAACACCCC-TCGATGTTTTGAAGACAAGATTG 779
consensus_9189#2      TCGCTGGCGCAATTACTGGGGCTATAACAACACCCCCTCGATGTTTTGAAGACAAGATTG 169
consensus_9189#1      TCGCTGGCGCAATTACTGGGGCTATAACAACACCCC-TTGATGTTTTGAAGACAAGATTG 760
                      ************************************ * *********************

consensus_9189#0      ATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTA 839
consensus_9189#2      ATGGTTCAGGGACAAGCAAACCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTCTA 229
consensus_9189#1      ATGGTTCAGGAACAAGCAAAGCAATATAGGGGAATCATAAGCTGTGCTCAAACAATTTTA 820
                      ********** ********* ************************************ **

consensus_9189#0      CGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGC 899
consensus_9189#2      CGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGC 289
consensus_9189#1      CGAGAGGAAGGTGCTGGTGCTTTTTTGAAGGGTATTGAGCCAAGGGTATTATGGATTGGC 880
                      ************************************************************

consensus_9189#0      ATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGG 959
consensus_9189#2      ATTGGTGGATCCATCTTCTTTGGTGTTTTGGAGAAAACGAAGTCAATTCTAGCTGAGAGG 349
consensus_9189#1      ATTGGTGGATCCATCTTCTTTGGTGTTCTGGAGAAAACGAAGTCAATTCTAGCTGAGAGG 940
                      *************************** ********************************

consensus_9189#0      AACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTT 1019
consensus_9189#2      AACAGCCGTAAAGTACGAATACTATGAAAGGGGGATGATTTTGCGTAGATGCTGCTATTT 409
consensus_9189#1      AACAGCCGTAAAGTACGAAAACTATGAAAGGGGAATGATTTTGTGTTGATGCTGCTATTT 1000
                      ******************* ************* ********* ** *************

consensus_9189#0      TCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTAGGAGCTCCGATTCACA 1079
consensus_9189#2      TCCCAGGATGTCTACTGATATGTGTGCTCGATCAATTAATT---------------CACA 454
consensus_9189#1      TCCGAGGATGTCTACTGATATGTGTGCTCGATCAATTAATTTTGGGAGCTCCGATTCATA 1060
                      *** *************************************               ** *

consensus_9189#0      TCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTA 1139
consensus_9189#2      TCCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTA 514
consensus_9189#1      TTCTTGTCAATCCCATCCGAATCTTGTATTTTGCTAGAGCATTACATGGGGTTAAAGTTA 1120
                      * **********************************************************

consensus_9189#0      TAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAGATAAT 1199
consensus_9189#2      TAATTTCTGAATTTCTTTTCGTCTGGCTAGCTTGTTTTGTACTTGAGCTAAAAAGATAAT 574
consensus_9189#1      TAATTTCTGAATTTCTTTTAAAAAAAAAAAA----------------------------- 1151
                      *******************         *                               

consensus_9189#0      TTTCTGGAAGCGAAATGCTTCTGTTCAAACGGATGATCTGTTGTCATTGCAAAAAAGAGA 1259
consensus_9189#2      TTTCTGGAAGCGAAATGCTTCTGTTCAAAAA----------------------------- 605
consensus_9189#1      ------------------------------------------------------------
                                                                                  

consensus_9189#0      AGTTCATTAGGATAGTTTACTGCACCCATCGTCCTAAAATATAGGCCATAGGGTGCTGTT 1319
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      ------------------------------------------------------------
                                                                                  

consensus_9189#0      TGTTATAGCTCTAGATGCTGGATTTTTGGAGTTGGGGGTACTTTTAGCTCTAAAAATTCA 1379
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      ------------------------------------------------------------
                                                                                  

consensus_9189#0      TAGATCTGGATCCGGGATTACATTGATAACATTTAGATGAATTATTTTATTCTTATTTAA 1439
consensus_9189#2      ------------------------------------------------------------
consensus_9189#1      ------------------------------------------------------------
                                                                                  

consensus_9189#0      ACTAAAACATAAAATTTT 1457
consensus_9189#2      ------------------
consensus_9189#1      ------------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)