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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2518 fasta sequence
[CTACCACCTTCTCGTTGATCCTCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA-GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGAACACTGTGCTAAAAAAAAAAAAAAAAAACACAAACATGCCGTTACGTAGCGTATCGTTGACA]
[+] EMBL AK103905 [CTACCACCTTCTCGTTGATCCTCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCA ]
[+] EMBL AK069164 [ TCCTCCCCGTTCTTGGCTCCCCTCGCATTCGTCCTCACTTCCCTTCTTCCATGGGGGTTCGCCGCCGTGAGTGAGGAGGAGGAGGAGTAGTACTAGGAGGAGGTGAGGCCATGGAGAGGGTGGAGGATCCGGACCTGGAGGACCCGAACCCGGACGTGGGGGAGCTGTTCAGCCACTACGACGGGCTCTACTTCCGCGGCGCGCTCGCCGGCGCCGGCTTCTCCGTCCAGTGGAGCTCGCCGCCGTCGCGGATGGCCGGTTCTTTTGGATCGTGTACCTTCGGAAAACCGGATAATACCATAACATTGTCTGAAACTGTGCTGAAATATCGCTCAAGTATTGATATGAAGAATGCATTGCTGCATCAGATGATCCATGCAATCTTATTTGTAAAGCATCATAGGAAGGACTGCCGGGGTCATGGTCCTATTTTTCGTGCTTGGATGACTGCTATTAACACCTGTTCTATTGACGATCACCAGAGACCACCTGATGGGTACAATATCACCACCAGACATGATTTTTCTCCGGACAAGTCCACCCGCAGCCTAAGTGGTTTTTTGTGGAAGTGTGAATATTGTGGGAATACACTTGTGAGAGCCACAAACATCGGTGCTCCATCTGATGCCTGCTGCATTGAGAATGTTGACAACTGCTCAACCTGTGGCAACATGCTTTGCCACTGGCATAACCACAAGATGAACTGTGGTGGCACATACACAAAGATGGGCACATCAACATCGGCAGAAGTTCAAAACAATGTTCAAGGTACAAAAAGATGCCCAACTGACATGAAAATGGCCAAGTCACAAAGAACCATACGGAAACCAGAGTCACCAGATTCAGATGGATTGCAGGAGAAAGCTACTGTCATGAAACAAAAAGCAGAAGGCGAGCTTCTCGCACTTGTGGCTGGCAGCAATTTAAAATTAACAGGAAGTAACTCTTCAAAGAAGGGAGTGAAGAGGCATAGGCCTGAAGACACTCAAGACACAAATGCTATGCTTTCTACCCCTCTGAAAAACCTGAAGCTGGGCCTAGACTTGGTTTCATCTGGGAAGCACAGGGTGTCATCTATAGTTGGTAGCAATAACACAAAATCATCAAGAGGTAGTGCTTCAAGGAAGCAACGCAAACGACATTCACCTGAGAATGTTCAGAAGTCCAGTGTTCTGCCTGCTCTCTCTCAAAAGAAGCTGAAACTGAAGGAAGACCTGGTTGTATCAGGGAAGAACGAGCCTTTATCCCTAGTGAATTTCAGCAATGGAAAATCAGCAGGAAGTAACTCATCAAAAAAGGTAAGCAAGCAGCATGAACTTGAAGGAGTTCAGAAATCCTGTGTTCAGCCTGCTAGCCCTCCGAGAAAACCGAGGCAAGATCTTGTTGCATCGGTCAAAACCGAGATTTCTTGTCTAGCCAGTCGCAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCGACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATCTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGA ]
[+] EMBL CA764338 [ CTTGTCTAGCCAGTCACAGCGATGCTAAAGTGTTGAGAGGCA GCTCCTCAAAATGCGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCGCTCTGCCTTCTGCCTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGATGTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTTCAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAAC ACATACTGGATGCTAAC AACTATTGGNGGTAGGCTCGCATCATTTTGGAAA TGACATTGNTTTTGCATAGGGCCTAA ATANAACAGTAGCTGCTTAT ]
[+] EMBL CF331297 [ AGAGGCANGCTCCTCAAAATGTGCAGGCAATCAGCATGAGCCTGCAGACATTCAGAAAAGCATCTCTCTGCCTTCTGCTTCTGAAAGTAAACTCAAGCGACAGAATGAAATTAGCTCCTCAACTAAGGCAGGGATGCAGGACAAGCCTAGAGGCACTCAGAAAACCATTGATCTGCCTGCTTCCCCTCAAACGAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGAACTAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGAGCGGAGAAGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCC ]
[+] EMBL CB097021 [ AAACCATTGATCTGCCTGCTTCCCCTCAAACAAAACTGAAGCAATCAGTGTTGCAGAAGCAAAAGAGACAGTGCGGATATAGGAAGTCAGCTAATGAGCAATTTGCCGTGATTAGTGCTTGGCTGAACTACTACGAGTCAGAAGGATCAAGTGGATCAACTGAGCCCCTTGTAAACAAAAGAACAGNNCGGAGAAGGATAGCGAGGAATAGGATAACTTGTACANGGGNAAGGAAGCAAANNGCNCCGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAANANNNAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCATCTCCATACTTGGCGATCGTTCCTTTCGACGCTGNTCATGATAT ]
[-] EMBL CF331298 [ AGGATAGCGAGGAATAGGATAACTTATACACGGTCAAGGAAGCAAAATGCCAGGGGAAATGCTTCCATCAAGTCCCAACCTTCTGAAGATGACTCGTCTCAAGCAAAAGCTGCAGCTCCATGCTTGGAGATTGTTGTTAGCACCCCTTCTGAGCAGGTGGTAAATCAATCCCCCGGATGCCAGTCCCAGTCACCAGCTCCATACTTGGCGATCGTTCCTTTCGACGCTGCTCATGATATGGTTCCACTACAGTCAGCAGATCCACCCGGTTTAACTGATGATCCAACCATTACTTCTGGCATAATTGATATTTCAGATGATGACTGATTTTATTTTCGAATTGGCATTGATCCTGCAACAGGCAATGCTTTCGATGGATGAACAACATACTGGATGCTAACAAACTATTGGTGTTAGGCTCGCATCATTTTGGAAATTGACATTGTTTTTGCATAGTGCCTAATATAGAACAGTAGCTGCTTATGAGCATAGGATTGCAAATTTTGCAACTCATGTTCGAACCACAGTAGCATAAATTCTTATAGTCCCAGCAGGATTTCAGAAGTAGACTCTTATATCTTGGGCACAAACCTCTGAATTATGATATGTAAAATGCAATTTCAATATAGTCTTCTGTGAACACTGTGCTAAAAAAAAAAAAAAAAAACACAAACATGCCGTTACGTAGCGTATCGTTGACA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||