cluster # 9221

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Oryza sativa
cluster # 9221 cluster # 9221 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9221#0 length = 1606 sequences # 6
consensusID : consensus_9221#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1606
fasta sequence
                              [GAGTGGTGAGGGTTTCATCTGCGGAGGAGGAGGGAGGAGGAGGGAGGAGGGTAGATCTGGGAGGGGGATGGGGAACAGGATAGGGGGGAGGAGGAAGGCGGGGGTGGAGGAGAGGTACACGAGGCCGCAGGGGCTGTACGAGCACAGGGACATCGACCAGAAGAAGCTCCGGAAGCTGATCCTCGAGGCCAAGCTCGCGCCGTGCTACATGGGCGCCGACGACGCCGCCGCCGCCGCCGACCTCGAGGAGTGCCCCATCTGCTTCCTGTACTACCCAAGTCTTAACCGATCAAAGTGTTGCTCAAAAGGGATATGCACCGAGTGCTTTCTCCAAATGAAACCAACTCACACTGCTCAGCCTACACAATGTCCATTCTGCAAAACTCCCAGTTATGCTGTGGAGTATCGTGGTGTAAAGACAAAGGAGGAAAGGAGCATAGAACAATTTGAAGAGCAGAAAGTCATAGAAGCACAAATGAGGATGCGCCAGCAAGCACTTCAAGATGAAGAAGATAAGATGAAAAGAAAACAGAACAGGTGCTCTTCTAGCAGAACAATCACACCGACCAAAGAAGTGGAGTATAGAGATATTTGCAGCACATCCTTTTCAGTGCCGTCATACCGATGTGCTGAGCAAGGAACTGAATGCTGTTCATCGGAACCTTCATGCTCTGCCCAGACTAGCATGCGCCCTTTCCATTCTAGGCATAACCGTGATGATAACATTGACATGAATATAGAGGATATGATGGTTATGGAAGCGATTTGGCGTTCCATT------CAGGGAAGTATAGGGAATCCTGTCTGTGGCAACTTTATGCCTGTAACTGAGCCATCTCCGCGTGAACGCCAGCCATTCGTTCCAGCTGCTTCTCTAGAAATACCTCATGGTGGTGGATTTTCCTGTGCGGTTGCGGCAATGGCTGAGCACC-AGCCACCCAGTATGGAC-TTCTCTTACATGGCTGGCAGCAGCGCATTCCCAGTTTTCGACATGTTCCGGCGACCATGCAACATTGCTGGTGGAAGCATGTGTAATCTGGAGAGCTCACCGGAGAGCTGGAGCGGGATAG-CACCAAGCTGCAGCAGGGAAGTGGTAAGAGAAGAAGGAGAGTGCTCGGCTGACCACTGGTCGGAGGGTGCAGAGGCCGGAACAAGCTACGCGGGCTCAGACATCGTGGCAGATGCCGGGACCATGCCGCAGCTGCCTTTCGCCGAGAACTTCGCCATGGCGCCAAGCCACTTCCGCCCGGAGAGCATCGAAGAACAGATGATGTTTTCCATGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCAAGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTTGCTGCCCTCTCCCTTGCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCAGCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATAGATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAAATAGAAAAAAGGAAAATGGGTCAACAGTTCTTTTGGCAGTAAAAAA]

[+] EMBL AK065504             [GAGTGGTGAGGGTTTCATCTGCGGAGGAGGAGGGAGGAGGAGGGAGGAGGGTAGATCTGGGAGGGGGATGGGGAACAGGATAGGGGGGAGGAGGAAGGCGGGGGTGGAGGAGAGGTACACGAGGCCGCAGGGGCTGTACGAGCACAGGGACATCGACCAGAAGAAGCTCCGGAAGCTGATCCTCGAGGCCAAGCTCGCGCCGTGCTACATGGGCGCCGACGACGCCGCCGCCGCCGCCGACCTCGAGGAGTGCCCCATCTGCTTCCTGTACTACCCAAGTCTTAACCGATCAAAGTGTTGCTCAAAAGGGATATGCACCGAGTGCTTTCTCCAAATGAAACCAACTCACACTGCTCAGCCTACACAATGTCCATTCTGCAAAACTCCCAGTTATGCTGTGGAGTATCGTGGTGTAAAGACAAAGGAGGAAAGGAGCATAGAACAATTTGAAGAGCAGAAAGTCATAGAAGCACAAATGAGGATGCGCCAGCAAGCACTTCAAGATGAAGAAGATAAGATGAAAAGAAAACAGAACAGGTGCTCTTCTAGCAGAACAATCACACCGACCAAAGAAGTGGAGTATAGAGATATTTGCAGCACATCCTTTTCAGTGCCGTCATACCGATGTGCTGAGCAAGGAACTGAATGCTGTTCATCGGAACCTTCATGCTCTGCCCAGACTAGCATGCGCCCTTTCCATTCTAGGCATAACCGTGATGATAACATTGACATGAATATAGAGGATATGATGGTTATGGAAGCGATTTGGCGTTCCATT      CAGGGAAGTATAGGGAATCCTGTCTGTGGCAACTTTATGCCTGTAACTGAGCCATCTCCGCGTGAACGCCAGCCATTCGTTCCAGCTGCTTCTCTAGAAATACCTCATGGTGGTGGATTTTCCTGTGCGGTTGCGGCAATGGCTGAGCACC AGCCACCCAGTATGGAC TTCTCTTACATGGCTGGCAGCAGCGCATTCCCAGTTTTCGACATGTTCCGGCGACCATGCAACATTGCTGGTGGAAGCATGTGTAATCTGGAGAGCTCACCGGAGAGCTGGAGCGGGATAG CACCAAGCTGCAGCAGGGAAGTGGTAAGAGAAGAAGGAGAGTGCTCGGCTGACCACTGGTCGGAGGGTGCAGAGGCCGGAACAAGCTACGCGGGCTCAGACATCGTGGCAGATGCCGGGACCATGCCGCAGCTGCCTTTCGCCGAGAACTTCGCCATGGCGCCAAGCCACTTCCGCCCGGAGAGCATCGAAGAACAGATGATGTTTTCCATGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCAAGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTCGCTGCCCTCTCCCTTGCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCAGCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATAGATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAAATAGAAAAAAGGAAAATGGGTCAACAGTTCTTT             ]
[+] EMBL AU077407             [GAGTGGTGAGGGTTTCATCTGCGGAGGAGGAGGGAGGAGGAGGGAGGAGGGTAGATCTGGGAGGGGGATGGGGAACAGGATAGGGGGGAGGAGGAAGGCGGGGGTGGAGGAGAGGTACACGAGGCCGCA GGGCTGTACGAGCACAGGGACATCGACCAGAAGAAGCTCCGGAAGCTGATCCTCGAGGCCAAGCTCGCGCCGTGCTACATGGGCGCCGACGACGCCGCCGCCGCCGCCGACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA750169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCGTTCCATTCAGGAGCAGGGAAGTATAGGGAATCCTGTCTGTGGCAACTTTATGCCTGTAACTGAGCCATCTCCGCGTGAACGCCAGCCATTCGTTCCAGCTGCTTCTCTAGAAATACCTCATGGTGGTGGATTTTNCTGTGCGGTT NGGCAATGGCTGAGCACC AGCCACCCAGTATGGAC TTCTCTTACATGGCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C96767               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCCGGCAATGGCTGACCACCAACCCACCCATTATGGACTTTCTCTTNCATGGCTGGCAGCAGCGCATTCCCAGTTTTCGACATGTTCCGGCGACCATGCAACATTGCTGGTGGAAGCATGTGTAATCTGGAGAGCTCACCGGAGAGCTGGAGCGGGATAGCCACCAAGCTGCAGCAGGGAAGTGGTAAGAGAAGAAGGAGAGTGCTCGGCTGACCACTGGTCGGAGGGTGCAGAGGCCGGANCAAG TACGCGGGCTCAGACATCGTGGCAGATGCCGGGACCATGCCGCAGCTGCCTTTCGCCGAGAACTTCGCCATGGCGCCAAGCCACTTCCGCCCGGAGAGCATCGAAGAACAGATGATGTTTTCCATGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCAAGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTTGCTGCCCTCTCCCTTGCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCAGCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATAGATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAAATAGAAAAAAGGAAAATGGGTCAACAGTTCTTTTGGCA  AAAAA ]
[+] EMBL CF331896             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGGAGAGCATCGAAGAACAGATGATGTTTTCC TGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCAAGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTTGCTGCCCTCTCCCTTGCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCAGCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATAGATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAAATAGAAAAAAGGAAAATGGGTCAACAGTTCTTTTGGCAGTAAAAA ]
[-] EMBL CF331895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAGCATCGAAGAACAGATGATGTTTTCCATGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCAAGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTTGCTGCCCTCTCCCTTGCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCAGCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATAGATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAAATAGAAAAAAGGAAAATGGGTCAACAGTTCTTTTGGCAGTAAAAAA]




>consensus_9221#0
GAGTGGTGAGGGTTTCATCTGCGGAGGAGGAGGGAGGAGGAGGGAGGAGGGTAGATCTGG
GAGGGGGATGGGGAACAGGATAGGGGGGAGGAGGAAGGCGGGGGTGGAGGAGAGGTACAC
GAGGCCGCAGGGGCTGTACGAGCACAGGGACATCGACCAGAAGAAGCTCCGGAAGCTGAT
CCTCGAGGCCAAGCTCGCGCCGTGCTACATGGGCGCCGACGACGCCGCCGCCGCCGCCGA
CCTCGAGGAGTGCCCCATCTGCTTCCTGTACTACCCAAGTCTTAACCGATCAAAGTGTTG
CTCAAAAGGGATATGCACCGAGTGCTTTCTCCAAATGAAACCAACTCACACTGCTCAGCC
TACACAATGTCCATTCTGCAAAACTCCCAGTTATGCTGTGGAGTATCGTGGTGTAAAGAC
AAAGGAGGAAAGGAGCATAGAACAATTTGAAGAGCAGAAAGTCATAGAAGCACAAATGAG
GATGCGCCAGCAAGCACTTCAAGATGAAGAAGATAAGATGAAAAGAAAACAGAACAGGTG
CTCTTCTAGCAGAACAATCACACCGACCAAAGAAGTGGAGTATAGAGATATTTGCAGCAC
ATCCTTTTCAGTGCCGTCATACCGATGTGCTGAGCAAGGAACTGAATGCTGTTCATCGGA
ACCTTCATGCTCTGCCCAGACTAGCATGCGCCCTTTCCATTCTAGGCATAACCGTGATGA
TAACATTGACATGAATATAGAGGATATGATGGTTATGGAAGCGATTTGGCGTTCCATTCA
GGGAAGTATAGGGAATCCTGTCTGTGGCAACTTTATGCCTGTAACTGAGCCATCTCCGCG
TGAACGCCAGCCATTCGTTCCAGCTGCTTCTCTAGAAATACCTCATGGTGGTGGATTTTC
CTGTGCGGTTGCGGCAATGGCTGAGCACCAGCCACCCAGTATGGACTTCTCTTACATGGC
TGGCAGCAGCGCATTCCCAGTTTTCGACATGTTCCGGCGACCATGCAACATTGCTGGTGG
AAGCATGTGTAATCTGGAGAGCTCACCGGAGAGCTGGAGCGGGATAGCACCAAGCTGCAG
CAGGGAAGTGGTAAGAGAAGAAGGAGAGTGCTCGGCTGACCACTGGTCGGAGGGTGCAGA
GGCCGGAACAAGCTACGCGGGCTCAGACATCGTGGCAGATGCCGGGACCATGCCGCAGCT
GCCTTTCGCCGAGAACTTCGCCATGGCGCCAAGCCACTTCCGCCCGGAGAGCATCGAAGA
ACAGATGATGTTTTCCATGGCTCTTTCTTTAGCAGATGGTCATGGAAGAACACACTCGCA
AGGGTTGGCATGGTTGTAGGTAGAGCACTCTAATTTTGACGCCTTGCTGCCCTCTCCCTT
GCGCTGCTGTTGCTGCCCTTCTCTCCCCTGCCTCCTGCTTCTGCCTCCTTTTTGCCACCA
GCTCTTGGCCTTTTTGTTCACCCCTTTTTTGCATGTGTTTTGTCGTCATGGTTTGATATA
GATCCAGCTATAGCTCTCCATTGTTATTGCTTATATGTATGTAAAATGGAATATGAGGAA
ATAGAAAAAAGGAAAATGGGTCAACAGTTCTTTTGGCAGTAAAAAA
clustalw multiple alignements is not computed in this case