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Oryza sativa
cluster # 9226 cluster # 9226       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9226#0 length = 1795 sequences # 2  
consensus_9226#1 length = 1625 sequences # 4  

consensusID : consensus_9226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1795
fasta sequence
                              [CCGTAAAACCCTAGCATTCCACGGAGTGTNCGGCCTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCA-NCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCTCCCCTTCCATTTCGTCGTCCCCTCCCCGCCTCCAGCCTCCTCTGGCCGCGGCTCCTCTCCACGTCCGGCCGCGACGACGACCCCAACAAGCCATGGGCGTTCACG-CGGAATCCGG-GATCCGGATCCCTTCGCCGCCGGTGAGGGCGTCGAAGCTCCCGCCGGCGAGGATCCACTAGGATTGAGCGCCGCCGG-GAGGACCCGTGGGCGAA-GATTTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGAGATCTTCAAGGAAGAAGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGGCAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGGCCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCGATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGCAAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCTCTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTCCTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACATCAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGACAAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTGTTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACTTCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGGGGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTATCCGGCTAGGGATCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCAAAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGGCAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAGTGGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCAC]

[+] EMBL AU108714             [CCGTAAAACCCTAGCATTCCACGGAGTGTNCGGCCTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCA NCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCTCCCCTTCCATTTCGTCGTCCCCTCCCCGCCTCCAGCCTCCTCTGGCCGCGGCTCCTCTCCACGTCCGGCCGCGACGACGACCCCAACAAGCCATGGGCGTTCACG CGGAATCCGG GATCCGGATCCCTTCGCCGCCGGTGAGGGCGTCGAAGCTCCCGCCGGCGAGGATCCACTAGGATTGAGCGCCGCCGG GAGGACCCGTGGGCGAA GATTTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGAGATCTTCAAGGAAGAAGCTGCCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK100166             [                                  CTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCAGCCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCTCCCCTTCCATTTCGTCGTCCCCTCCCCGCCTCCAGCCTCCTCTGGCCGCGGCTCCTCTCCACGTCCGGCCGCGACGACGACCCCAACAAGCCATGGGCGTTCACGCCGGAATCCGGCGATCCGGATCCCTTCGCCGCCGGTGAGGGCGTCGAAGCTCCCGCCGGCGAGGATCCACTAGGATTGAGCGCCGCCGGCGAGGACCCGTGGGCGAAGGATTTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGAGATCTTCAAGGAAGAGGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGGCAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGGCCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCGATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGCAAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCTCTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTCCTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACATCAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGACAAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTGTTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACTTCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGGGGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTATCCGGCTAGGGATCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCAAAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGGCAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAGTGGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCAC]


>consensus_9226#0 CCGTAAAACCCTAGCATTCCACGGAGTGTNCGGCCTCCCTCCTCCGGCCGCCACCATGCT GCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCC GGCGAGCGCANCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCTCCCCTTCCATTT CGTCGTCCCCTCCCCGCCTCCAGCCTCCTCTGGCCGCGGCTCCTCTCCACGTCCGGCCGC GACGACGACCCCAACAAGCCATGGGCGTTCACGCGGAATCCGGGATCCGGATCCCTTCGC CGCCGGTGAGGGCGTCGAAGCTCCCGCCGGCGAGGATCCACTAGGATTGAGCGCCGCCGG GAGGACCCGTGGGCGAAGATTTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGG AGATCTTCAAGGAAGAAGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGG CAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGG CCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCG ATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGC AAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCT CTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTC CTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACAT CAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGAC AAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTG TTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACT TCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGG GGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTA TCCGGCTAGGGATCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCA AAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGG CAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTT TTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAG CTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCT GGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATT TGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCT ACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGG CTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTC TCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAGT GGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCAC



consensusID : consensus_9226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1625
fasta sequence
                              [CTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCAGCCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGGGATCTTCAAGGAAGAGGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGGCAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGGCCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCGATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGCAAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCTCTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTCCTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACATCAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGACAAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTGTTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACTTCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGGGGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTT-GGAGC-TATCCGGCTAGGGAT-CAGCAGGGCCTTGCAGAATTGGGAA-CCA-GGACTACGCCCAAATCTC-AAAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGGCAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAATGGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCACCTTGTTCATGAAAGCTATGGGCGAGACTGTAAGTTATCAATATTACAAACCCTCGAGCTTCTCGATAGTCGATGCCTTGATG]

[+] EMBL AK100864             [CTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCAGCCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGGGATCTTCAAGGAAGAGGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGGCAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGGCCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCGATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGCAAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCTCTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTCCTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACATCAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGACAAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTGTTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACTTCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGGGGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTT GGAGC TATCCGGCTAGGGAT CAGCAGGGCCTTGCAGAATTGGGAA CCA GGACTACGCCCAAATCTC AAAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGGCAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAATGGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCACCTTGTTCATGAAAGCTATGGGCGAGACTGTAAGTTATCAATATTACAAACCCTCGAGCTTCTCGATAGTCGATGCCTTGATG]
[+] EMBL C96952               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACAAGTTGGGAGCTTANCCGGCTAGGGATCCAGCAGGGCCTTGCAGAATTGGGAACCCAGGGNCTACGCCCAAATCTCAAAAGCAGCTGNATATTTGACANGAGACTCCCGGGTTGTTNAAAGGAAAAANCCTGGAAAGGCAAAAGCAAGAAAGAGCTTCCAATGGGTCAACCGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAATGGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCaaaaa                                                                                                ]
[+] EMBL CF332354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gagtagaaATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF332353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_9226#1 CTCCCTCCTCCGGCCGCCACCATGCTGCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTC GGCCACCGCCTCCAAACCCTAACTCCGGCGAGCGCAGCCACCGCCGCCGCTGCCTCGTCC TCTCCCGTCTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGGGGATCTTCAAGG AAGAGGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGGCAGGCGCCGACG AGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGGCCGTGCTCGGGG GTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCGATGCGGGGGAAG ACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGCAAGAACTAATGG AGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCTCTGGGATTACAG AGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTCCTGGATTACCTC CCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACATCAAGCAGAGCTG ATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGACAAGTCGATGAGA AAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTGTTTGGATTCAGC CTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACTTCCCAATTCTGG ATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGGGGCGTTGGGATG TTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTATCCGGCTAGGGA TCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCAAAGCAGCTGGAT ATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGGCAAAAGCAAGAA AGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTTTTCTGGTCATGG CGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAGCTCTATACTCAT ATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCTGGTTTTCTTTAA TGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATTTGACCTAATTAA GATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCTACCGATGGAATT CGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGGCTGTATGCCTGT ATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTCTCTGACTATGGT AAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAATGGAATATTTTCC AAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCACCTTGTTCATGAAAGCTA TGGGCGAGACTGTAAGTTATCAATATTACAAACCCTCGAGCTTCTCGATAGTCGATGCCT TGATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9226#0      CCGTAAAACCCTAGCATTCCACGGAGTGTNCGGCCTCCCTCCTCCGGCCGCCACCATGCT 60
consensus_9226#1      ------------------------------------------------------------
                                                                                  

consensus_9226#0      GCTCCGCCGCCTCCTCCACTCCTCCCGCCGCCTCGGCCACCGCCTCCAAACCCTAACTCC 120
consensus_9226#1      ------------------------------------------------------------
                                                                                  

consensus_9226#0      GGCGAGCGCANCACCGCCGCCGCTGCCTCGTCCTCTCCCGTCTCCGCTCCCCTTCCATTT 180
consensus_9226#1      ------------------------------------------------------------
                                                                                  

consensus_9226#0      CGTCGTCCCCTCCCCGCCTCCAGCCTCCTCTGGCCGCGGCTCCTCTCCACGTCCGGCCGC 240
consensus_9226#1      -------------------------------------------CTCCCTCCTCCGGCCGC 17
                                                                    ** * *********

consensus_9226#0      GACGACGACCCCAACAAGCCATGGGCGTTCACGCGGAATCCGGGATCCGGATCCCTTCGC 300
consensus_9226#1      CACCATGCTGCT------CCGCCGCCTCCTCCAC----TCC----TCCCGCCGCCTCGGC 63
                       ** * *   *       **   * *     * *    ***    *** *   ***  **

consensus_9226#0      CGCCGGTGAGGGCGTCGAAGCTCCCGCCGGCGAGGATCCACTAGGATTGAGCGCCGCCGG 360
consensus_9226#1      CACCGCCTCCAA-ACCCTAACTCCGGCGAGCGCAG--CCAC----------CGCCGCCGC 110
                      * ***          *  * **** **  ***  *  ****          ******** 

consensus_9226#0      GAGGACCCGTGGGCGAAGATTTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGG 420
consensus_9226#1      --TGCCTCGTCCTCTCCCGTCTCCGCGCGGAGGGCAGCGAGAAGGGGGACGTGTTCGAGG 168
                         * * ***   *     * ***************************************

consensus_9226#0      AGATCTTCAAGGAAGAAGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGG 480
consensus_9226#1      GGATCTTCAAGGAAGAGGCTGCCACCGCCGCCGTCGCTTCTGGAGAGAAGGCTCCGGGGG 228
                       *************** *******************************************

consensus_9226#0      CAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGG 540
consensus_9226#1      CAGGCGCCGACGAGCTGTGGACGCTGAGTGGGGAGGATGAGAAGGATCCTTTCGCGGAGG 288
                      ************************************************************

consensus_9226#0      CCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCG 600
consensus_9226#1      CCGTGCTCGGGGGTGGGCTTGAGGGGATCGGAGGTGATGGCGCTGCGATTGATGAGGCCG 348
                      ************************************************************

consensus_9226#0      ATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGC 660
consensus_9226#1      ATGCGGGGGAAGACGAGGAGGAGGAAGAGCGAAAACGGCTAGAGAGAAGGGCGAGGGAGC 408
                      ************************************************************

consensus_9226#0      AAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCT 720
consensus_9226#1      AAGAACTAATGGAGACACTCAAAGGTCCAAATCGTGCATTTGGTGATCTCATTGAGGCCT 468
                      ************************************************************

consensus_9226#0      CTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTC 780
consensus_9226#1      CTGGGATTACAGAGGATATGATTGCTAGTTTGATCCTCTTAAAGGATGTTAGGGGTGTTC 528
                      ************************************************************

consensus_9226#0      CTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACAT 840
consensus_9226#1      CTGGATTACCTCCCCTAAGAGAAATAGAAGATGAAACTATCGAAAAAATGAATGCAACAT 588
                      ************************************************************

consensus_9226#0      CAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGAC 900
consensus_9226#1      CAAGCAGAGCTGATGTAGAACGCCAAAAGCAAGAGGAAATTGCTAAAGCACGTGTAAGAC 648
                      ************************************************************

consensus_9226#0      AAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTG 960
consensus_9226#1      AAGTCGATGAGAAAGGAAGGGCTTATGGAACAGGGAAAAGGAAATGCAGCATTGCCCGTG 708
                      ************************************************************

consensus_9226#0      TTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACT 1020
consensus_9226#1      TTTGGATTCAGCCTGGTGATGGGAAGTTCATTGTCAATGACAAACAATTTGATTCTTACT 768
                      ************************************************************

consensus_9226#0      TCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGG 1080
consensus_9226#1      TCCCAATTCTGGATCATCGGGCTGATCTTCTTCGCCCATTTACCGTGACCAAAACTTTGG 828
                      ************************************************************

consensus_9226#0      GGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTA 1140
consensus_9226#1      GGCGTTGGGATGTTACTTGTACTGTGAAAGGTGGTGGTGTCTCAGGACAAGTTGGAGCTA 888
                      ************************************************************

consensus_9226#0      TCCGGCTAGGGATCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCA 1200
consensus_9226#1      TCCGGCTAGGGATCAGCAGGGCCTTGCAGAATTGGGAACCAGGACTACGCCCAAATCTCA 948
                      ************************************************************

consensus_9226#0      AAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGG 1260
consensus_9226#1      AAGCAGCTGGATATTTGACAAGAGACTCACGGGTTGTTGAAAGGAAAAAGCCTGGAAAGG 1008
                      ************************************************************

consensus_9226#0      CAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTT 1320
consensus_9226#1      CAAAAGCAAGAAAGAGCTTCCAATGGGTCAAACGGTAACAGGTACCTGCTCTTGTTTTTT 1068
                      ************************************************************

consensus_9226#0      TTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAG 1380
consensus_9226#1      TTCTGGTCATGGCGTTCTGTATTTGCAGTTGGACTGATATTTTCGGAAGGTCCTTTTGAG 1128
                      ************************************************************

consensus_9226#0      CTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCT 1440
consensus_9226#1      CTCTATACTCATATATTCCAGCCTTTACCGATAATGGGCATAATGAGACACAAGCATTCT 1188
                      ************************************************************

consensus_9226#0      GGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATT 1500
consensus_9226#1      GGTTTTCTTTAATGTTGACAATTGACACAGCAAACTGATCCCAGGGAAAAAAAAATCATT 1248
                      ************************************************************

consensus_9226#0      TGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCT 1560
consensus_9226#1      TGACCTAATTAAGATGCAGAAGATACATTGTTATAAGCTGTCATTAAAATGGGCTGGGCT 1308
                      ************************************************************

consensus_9226#0      ACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGG 1620
consensus_9226#1      ACCGATGGAATTCGTTGTCTAGCTCCCAGAAGTTATTTCTGTTTTGCTGGGATGGCATGG 1368
                      ************************************************************

consensus_9226#0      CTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTC 1680
consensus_9226#1      CTGTATGCCTGTATATCAGCTGCTGCCACATTTTTCCTCCATGTATGTCTGTGCATGCTC 1428
                      ************************************************************

consensus_9226#0      TCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAGT 1740
consensus_9226#1      TCTGACTATGGTAAATGAGAAGTTATGCGTCCAACTCTGTAAGCAGTAATAAGACCAAAT 1488
                      ********************************************************** *

consensus_9226#0      GGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCAC----- 1795
consensus_9226#1      GGAATATTTTCCAAACGTGAGATGTCATTGTGCTTCTCTCTGAGCAATCCACCACCTTGT 1548
                      *******************************************************     

consensus_9226#0      ------------------------------------------------------------
consensus_9226#1      TCATGAAAGCTATGGGCGAGACTGTAAGTTATCAATATTACAAACCCTCGAGCTTCTCGA 1608
                                                                                  

consensus_9226#0      -----------------
consensus_9226#1      TAGTCGATGCCTTGATG 1625
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)