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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9258#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3804 fasta sequence
[CGTCAGATCTGCCATTACCGAAGCCGAGCAGGCGAGGCGAGGCGAGGCGAGC-GGACGCCATGGAGCCCGGCGTGAGCATCGAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTGCCGGTGGGCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGGCACGCGCGCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCCTTCGCGCACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGCGTGCCCTCGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCGTCGTCGGCATCTGCCACCTCCCGTCCTTCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGTCGACGCCGCGCGCTCCTACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAGCTGGTGCAGAAAAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTGGAACTTCATATGCTCACGATGATCCAAGACCTTTCTGCTTCGCTGTTGATGGAGTTTGAGAAATGGGTCTTACGTGCAGAATCAACGGGAACTATTCTAAAGACTCCTTTGGATTCACAATCCAGTCTTGGCTCAGAGGAGGTGATTAAGGCTAAAAAAAGAAGGCTGGGTCGTGCGCAAAAGATAATTGGAGATTATTGCTTGTTGGCTGGATCACCTGCTGATGCGAATGCACATTATGCCACTGCAATAGAGCTTGCAAGATTAACAGGAGATGTTTTCTGGCATGCTGGAGCCCTTGAGGGTAGTGTCTGTGCATTAGTGGTTGATAGGATGGCCGAAAGTGACCCTGTTTTGGAGGACGAAGTGAAGTTTCGTTATTACACCATTATCCAGCTATACAGAAGAGCAACTTTACAAGACAATGCTCAAAGAGTTTCACCAGTCAGCTTTGAGCTTGAAGCTGCATTGAAGCTGGCAAGATATTTGTGCAGGCGGCAATGTGCCAAGGAGGTGTCAGATTTACTAATGGGCGCTGCCGATGGTGCCAAGGCTCTGATTGATGCCAGTGATCGCTTGATACTCTATATTGAAATCGCGAGACTTTTTGGTACACTTGGTTATAAACGCAAGGCGGCCTTTTTTTCAAGACAAGTTGCGCAATTGTATCTCCAGCAGGATAATGCATATGCTGCTATGAGTGCTATGCAGGTCCTAACCACAACTACAACTGCATACCATGTTCAAAGCAGGAAGACCAGCAAAATGGATCATGGTTTGCTCAAGTCTGTAGTATCACTATTTGAGTCACAATGGAGTACCCTTCAAATGGTTGTTCTAAGAGAGATACTGATGTCTTCAATCCGGGCTGCGGATCCCTTATCGTCGTGGAGTGCTGCAGCCCGGCTTCTTCGGTCATTTTACCCACTCATCACCCCAGCTGGTCAGAGTGGCTTGGCAAGCTCTCTTTCAAACTCAGCTGATAAGCTTCCATCGGGCACACGTTGTGCCGATCCATGTCTTCCTTTTATCAGGTTGCATTCTTTCCCACTGCACCCTTCACAAAGAGAGATAGTGAAGCGCAATCCAAATAAAAAAGAGTGGTGGACTGGTGGTGGTCCTTCTGGACCTTTTATTTACACACCTTTCACCAAGGGGGGAACATCTGGAACTAGCAAACAAGAGGTAAATTGGATTGTGGGAGAGCCAGTTCAAGTTATGGTAGAGTTAGCAAATCCCTGCAGCTTTGACCTAATTGTTGAGAGCATTTATCTCTCTGTTCATTCTGGAAATTTTGATGCCTTTCCGGTTAGTGTTAATCTTCCACCAAACACTTCCAAATTGGTTCTGTTATCTGGAATTCCAACACAAGTTGGACAAGTATCAATTCCTGGGTGCATTGTTCATTGCTTCGGTGTTATCACAGAACACCTATTCAAAGAGGTCGATTGTCTACTCCTTGGAGCTGCACAAGGGCTTGTTCTTTCTGATCCTTTCAGATGCTGTGGCTCTAGCAAGTTTAAGAGCGTTAACTTTCCAAGCATTTCTGTTGTTCCTCCTCTGCCATTATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGTGAAATCCGTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCAAATGTTGCATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGGAAATCTGCACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCCTGGCATCTTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGGAGGATAGCAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGGAACTCTGAGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAATATTTGTGTTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCTGCCCGGTTTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGCAGTGATGCGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGGGACCTCCGTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGATGTCTCAGTTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACGGCCAGTTCGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATACCTCTTGAGCACTTCAAATTACCTGTTCTTGACACTTCCTTCTTTGTGAAGGAAAATGGAAGTGATGAACCTCTTGGATCAGAGCTGCCACGTTAGCAGAAAAGAATGCCAAGGCGGAACTAAATGCTTCAATCAACAACTTGATTTCAAAGATAAAAGTGAAGTGGCATTCTGGGAGAAATAGCTCCGGTGAGCTGAATATTAAAGATGCTATTCAGACAGCATTACAGGCATCTATTATGGACATACTGTTGCCTGATCCGCTGACATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATATCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTCCTGGTCCCCGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTTCTTCGTGCTCGGGCAAAGGCAGAGTCGCCCGACGAACCTATACTATGCCGTGGATCTCCATTCCATATCCATGTAGTTGGTACAGCTTAGCCGGACTTTCTTGGATTTAGTCTAGAGCGTGCCCTGTATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATCATGTAGAATTTTTATGCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGTACAGTGTAAAAGCATAGTGAAGGTTGTTTCAC]
[+] EMBL AK066572 [CGTCAGATCTGCCATTACCGAAGCCGAGCAGGCGAGGCGAGGCGAGGCGAGC GGACGCCATGGAGCCCGGCGTGAGCATCGAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTGCCGGTGGGCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGGCACGCGCGCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCCTTCGCGCACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGCGTGCCCTCGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCGTCGTCGGCATCTGCCACCTCCCGTCCTTCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGTCGACGCCGCGCGCTCCTACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAGCTGGTGCAGAAAAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTGGAACTTCATATGCTCACGATGATCCAAGACCTTTCTGCTTCGCTGTTGATGGAGTTTGAGAAATGGGTCTTACGTGCAGAATCAACGGGAACTATTCTAAAGACTCCTTTGGATTCACAATCCAGTCTTGGCTCAGAGGAGGTGATTAAGGCTAAAAAAAGAAGGCTGGGTCGTGCGCAAAAGATAATTGGAGATTATTGCTTGTTGGCTGGATCACCTGCTGATGCGAATGCACATTATGCCACTGCAATAGAGCTTGCAAGATTAACAGGAGATGTTTTCTGGCATGCTGGAGCCCTTGAGGGTAGTGTCTGTGCATTAGTGGTTGATAGGATGGCCGAAAGTGACCCTGTTTTGGAGGACGAAGTGAAGTTTCGTTATTACACCATTATCCAGCTATACAGAAGAGCAACTTTACAAGACAATGCTCAAAGAGTTTCACCAGTCAGCTTTGAGCTTGAAGCTGCATTGAAGCTGGCAAGATATTTGTGCAGGCGGCAATGTGCCAAGGAGGTGTCAGATTTACTAATGGGCGCTGCCGATGGTGCCAAGGCTCTGATTGATGCCAGTGATCGCTTGATACTCTATATTGAAATCGCGAGACTTTTTGGTACACTTGGTTATAAACGCAAGGCGGCCTTTTTTTCAAGACAAGTTGCGCAATTGTATCTCCAGCAGGATAATGCATATGCTGCTATGAGTGCTATGCAGGTCCTAACCACAACTACAACTGCATACCATGTTCAAAGCAGGAAGACCAGCAAAATGGATCATGGTTTGCTCAAGTCTGTAGTATCACTATTTGAGTCACAATGGAGTACCCTTCAAATGGTTGTTCTAAGAGAGATACTGATGTCTTCAATCCGGGCTGCGGATCCCTTATCGTCGTGGAGTGCTGCAGCCCGGCTTCTTCGGTCATTTTACCCACTCATCACCCCAGCTGGTCAGAGTGGCTTGGCAAGCTCTCTTTCAAACTCAGCTGATAAGCTTCCATCGGGCACACGTTGTGCCGATCCATGTCTTCCTTTTATCAGGTTGCATTCTTTCCCACTGCACCCTTCACAAAGAGAGATAGTGAAGCGCAATCCAAATAAAAAAGAGTGGTGGACTGGTGGTGGTCCTTCTGGACCTTTTATTTACACACCTTTCACCAAGGGGGGAACATCTGGAACTAGCAAACAAGAGGTAAATTGGATTGTGGGAGAGCCAGTTCAAGTTATGGTAGAGTTAGCAAATCCCTGCAGCTTTGACCTAATTGTTGAGAGCATTTATCTCTCTGTTCATTCTGGAAATTTTGATGCCTTTCCGGTTAGTGTTAATCTTCCACCAAACACTTCCAAATTGGTTCTGTTATCTGGAATTCCAACACAAGTTGGACAAGTATCAATTCCTGGGTGCATTGTTCATTGCTTCGGTGTTATCACAGAACACCTATTCAAAGAGGTCGATTGTCTACTCCTTGGAGCTGCACAAGGGCTTGTTCTTTCTGATCCTTTCAGATGCTGTGGCTCTAGCAAGTTTAAGAGCGTTAACTTTCCAAGCATTTCTGTTGTTCCTCCTCTGCCATTATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGTGAAATCCGTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCAAATGTTGCATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGGAAATCTGCACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCCTGGCATCTTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGGAGGATAGCAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGGAACTCTGAGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAATATTTGTGTTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCTGCCCGGTTTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGCAGTGATGCGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGGGACCTCCGTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGATGTCTCAGTTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACGGCCAGTTCGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATACCTCTTGAGCACTTCAAATTACCTGTTCTTGACACTTCCTTCTTTGTGAAGGAAAATGGAAGTGATGAACCTCTTGGATCAGAGCTGCCACGTTAGCAGAAAAGAATGCCAAGGCGGAACTAAATGCTTCAATCAACAACTTGATTTCAAAGATAAAAGTGAAGTGGCATTCTGGGAGAAATAGCTCCGGTGAGCTGAATATTAAAGATGCTATTCAGACAGCATTACAGGCATCTATTATGGACATACTGTTGCCTGATCCGCTGACATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATATCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTCCTGGTCCCCGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTTCTTCGTGCTCGGGCAAAGGCAGAGTCGCCCGACGAACCTATACTATGCCGTGGATCTCCATTCCATATCCATGTAGTTGGTACAGCTTAGCCGGACTTTCTTGGATTTAGTCTAGAGCGTGCCCTGTATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATCATGTAGAATTTTTATGCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGTACAGTGTAAAAGCATAGTGA ]
[+] EMBL CB655380 [ AGGCGCCCTTGACGCCATGGAGCCCGGCGTGAGCATCCAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTGCCGGTGGGCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGGCACGCGCGCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCCTTCGCGCACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGCGTGCCCTCGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCCTCGTCGGCATCTGCCACCTCCCGTCCTCCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGACGACGCCGCGCGCTCCTACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAGCTGGTGCAGACCAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTGGAACTTCATATGCTCACCATGATCCAACACCTTTCTGCTTCGCTGTTGATGGACTTTGAGAAATGGGTCTTACGTGCAGAATCAACCGGACCTATTCTAAACACTCCTTT ]
[+] EMBL CB666694 [ TATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGTGAAATCCGTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCAAATGTTGCATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGGAAATCTGCACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCCTGGCATCTTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGGAGGATAGCAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGGAACTCTGAGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAATATTTGTGTTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCTGCCCGGTTTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGCAGTGATGCGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGGGACCTCCGTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGATGTCTCAGTTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACGGCCAGTTCGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATACCTCTTGAGCACTTCGAATTACCTGTTCTTGACACTT ]
[-] EMBL CB684658 [ ATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAAAACTGACTCTTTGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGAGAATTGCTTTGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTTTTAGTGACATATATCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTCCTGGTCCCCGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTTTTTCGTGCTCGGGCAAAGGCAGAGTCGCCCGACGAACCTATACTATGCCGTGGATCTCCATTCCATATCCATGTAGTTGGTACAGCTTAGCCGGACTTTCTTGGATTTAGTTTAGAGCGTGCCCTGTATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATCATGTAGAATTTTTATGCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGTACAGTGTAAAAGCATAGTGAAGGTTGTTTCAC]
[+] EMBL AW070125 [ GCCGGACTTTCTTGGATTTAGTCTAGAGCGTGCCCTGTATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATCATGTAGAATTTTTATGCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGTACctcggc ]
consensusID : consensus_9258#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 653 fasta sequence
[ATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATATCTGGAGGTTCAACCCCTGCAGGAGGTAGTACATCCTTTTTCTATATACCTCCCACGGCGAGGGCACGCAGCCGCCGAGCACGAACTTGAGGCGGAGGCAGCCGCCGCCCCTCGGCTGGTGCGCGAAGGGGCTCTTTTGGTGCTCCGAGTAGTAGGGCCGCAGCGAGGCGAGGTCGACGCGCGCGTGCCGCGCCACCAGCGCCGCGTAGTCGCGGAGGCGCGCCGGCGAGATCGGCCCGCCCACCGGCAGCACCGCCACGCGGATCGCCGACCCGGACTCGATGCTCACGCCGGGCTCCATGGCGTCCGCTCGCCTCGCCTCGCCTCGCCTGCTCGGCTTCGGTAATGGCAGATCTGACGAAGAGGGGAGTCAG]
[-] EMBL CB684657 [ATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAAAACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCTGAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAATAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGAGAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATATCTGGAGGTTCAACCCCTGCAGGAGGTAGTACATCCTTTTTCTATATACCTCCCACGGCGAGGGCACGCAGCCGCCGAGCACGAACTTGAGGCGGAGGCAGCCGCCGCCCCTCGGCTGGTGCGCGAAGGGGCTCTTTTGGTGCTCCGAGTAGTAGGGCCGCAGCGAGGCGAGGTCGACGCGCGCGTGCCGCGCCACCAGCGCCGCGTAGTCGCGGAGGCGCGCCGGCGAGATCGGCCCGCCCACCGGCAGCACCGCCACGCGGATCGCCGACCCGGACTCGATGCTCACGCCGGGCTCCATGGCGTCCGCTCGCCTCGCCTCGCCTCGCCTGCTCGGCTTCGGTAATGGCAGATCTGACGAAGAGGGGAGTCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9258#0 CGTCAGATCTGCCATTACCGAAGCCGAGCAGGCGAGGCGAGGCGAGGCGAGCGGACGCCA 60
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TGGAGCCCGGCGTGAGCATCGAGTCCGGGTCGGCGATCCGCGTGGCGGTGCTGCCGGTGG 120
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GCGGGCCGATCTCGCCGGCGCGCCTCCGCGACTACGCGGCGCTGGTGGCGCGGCACGCGC 180
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GCGTCGACCTCGCCTCGCTGCGGCCCTACTACTCGGAGCACCAGAAGAGCCCCTTCGCGC 240
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ACCAGCCGTGGGGCGGCGGCTGCCTCCGCCTCAAGTTCGTGCTCGGCGGCTGCGTGCCCT 300
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CGCCGTGGGAGGACTTCCAGTCCTCCCGCAAGGTGCTCGCCGTCGTCGGCATCTGCCACC 360
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TCCCGTCCTTCCCCGATCTCGGCCGCGTCGCCGCCGACTTCGTCGACGCCGCGCGCTCCT 420
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ACCCCTCCGCGCTCGCCAGCCGCTGCTTCGCCTTCTGCCCCACCGACGCGCAGCTGGTGC 480
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 AGAAAAAGAGGGATAATATTATTATGTTCCCTCCTTCTGATCAACAATCGTTGGAACTTC 540
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ATATGCTCACGATGATCCAAGACCTTTCTGCTTCGCTGTTGATGGAGTTTGAGAAATGGG 600
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TCTTACGTGCAGAATCAACGGGAACTATTCTAAAGACTCCTTTGGATTCACAATCCAGTC 660
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTGGCTCAGAGGAGGTGATTAAGGCTAAAAAAAGAAGGCTGGGTCGTGCGCAAAAGATAA 720
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTGGAGATTATTGCTTGTTGGCTGGATCACCTGCTGATGCGAATGCACATTATGCCACTG 780
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAATAGAGCTTGCAAGATTAACAGGAGATGTTTTCTGGCATGCTGGAGCCCTTGAGGGTA 840
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GTGTCTGTGCATTAGTGGTTGATAGGATGGCCGAAAGTGACCCTGTTTTGGAGGACGAAG 900
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TGAAGTTTCGTTATTACACCATTATCCAGCTATACAGAAGAGCAACTTTACAAGACAATG 960
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CTCAAAGAGTTTCACCAGTCAGCTTTGAGCTTGAAGCTGCATTGAAGCTGGCAAGATATT 1020
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TGTGCAGGCGGCAATGTGCCAAGGAGGTGTCAGATTTACTAATGGGCGCTGCCGATGGTG 1080
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CCAAGGCTCTGATTGATGCCAGTGATCGCTTGATACTCTATATTGAAATCGCGAGACTTT 1140
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTGGTACACTTGGTTATAAACGCAAGGCGGCCTTTTTTTCAAGACAAGTTGCGCAATTGT 1200
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ATCTCCAGCAGGATAATGCATATGCTGCTATGAGTGCTATGCAGGTCCTAACCACAACTA 1260
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAACTGCATACCATGTTCAAAGCAGGAAGACCAGCAAAATGGATCATGGTTTGCTCAAGT 1320
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CTGTAGTATCACTATTTGAGTCACAATGGAGTACCCTTCAAATGGTTGTTCTAAGAGAGA 1380
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TACTGATGTCTTCAATCCGGGCTGCGGATCCCTTATCGTCGTGGAGTGCTGCAGCCCGGC 1440
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTCTTCGGTCATTTTACCCACTCATCACCCCAGCTGGTCAGAGTGGCTTGGCAAGCTCTC 1500
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTTCAAACTCAGCTGATAAGCTTCCATCGGGCACACGTTGTGCCGATCCATGTCTTCCTT 1560
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTATCAGGTTGCATTCTTTCCCACTGCACCCTTCACAAAGAGAGATAGTGAAGCGCAATC 1620
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAAATAAAAAAGAGTGGTGGACTGGTGGTGGTCCTTCTGGACCTTTTATTTACACACCTT 1680
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TCACCAAGGGGGGAACATCTGGAACTAGCAAACAAGAGGTAAATTGGATTGTGGGAGAGC 1740
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAGTTCAAGTTATGGTAGAGTTAGCAAATCCCTGCAGCTTTGACCTAATTGTTGAGAGCA 1800
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTTATCTCTCTGTTCATTCTGGAAATTTTGATGCCTTTCCGGTTAGTGTTAATCTTCCAC 1860
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAAACACTTCCAAATTGGTTCTGTTATCTGGAATTCCAACACAAGTTGGACAAGTATCAA 1920
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTCCTGGGTGCATTGTTCATTGCTTCGGTGTTATCACAGAACACCTATTCAAAGAGGTCG 1980
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ATTGTCTACTCCTTGGAGCTGCACAAGGGCTTGTTCTTTCTGATCCTTTCAGATGCTGTG 2040
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GCTCTAGCAAGTTTAAGAGCGTTAACTTTCCAAGCATTTCTGTTGTTCCTCCTCTGCCAT 2100
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TATTAGTTGCCAATGTTGTGGGCGGAGATGGTTCTATTCTTCTATATGAAGGTGAAATCC 2160
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GTGATGTTTTGATAACACTGACAAATGCTGGAACTGTACCTGTTGAAGAAGCAAATGTTG 2220
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CATTGTCAGGGAAGAACCAAGATTCTGTTATTTCGATTGCCCATAGCACATGGAAATCTG 2280
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CACTTCCTATTAAACCTGGTGGAGAAGTGACATTCGCAGTGACTCTCAGAGCCTGGCATC 2340
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTAGCCCGACAGATTTGGAAGCAGATGGCAGCAGATCTCCTGCAAACTCAAGGAGGATAG 2400
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CAAGAGAAGGGAGTAATCCTTTCTTGGATATTCACTATGCTGGTCCTTCAGGGAACTCTG 2460
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 AGAGCAATGATGTTTCTCTCCCACCTGGAAGACGTCTGGTTGTTCCGTTGAATATTTGTG 2520
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTGTACAGGGCATGCGACTTGTAAGAGCACGCCTGTTGTCCATGGAATTACCTGCCCGGT 2580
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTACTGATGCTCACTTAAGATCTGTCAGTAGCAAGGACAATCTAAGCAATGGCAGTGATG 2640
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CGATTCGTAATGACATTAGCTTATTGAAGATTGATCCTTATAAAGGAAGCTGGGACCTCC 2700
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 GTCTTCTGGAACTTGAGCTGTTTAATCCTACTGATGTTGTTTTCGATGTTGATGTCTCAG 2760
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTCATCTCGATGGCACAAGTGTCGAGCAAAAAATTCTTCCAGAGGATAAAACGGCCAGTT 2820
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CGGCTTGCCACAAAACTCGAATTGATCGTGACTACTCTGCTAGAGTTCTCATACCTCTTG 2880
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 AGCACTTCAAATTACCTGTTCTTGACACTTCCTTCTTTGTGAAGGAAAATGGAAGTGATG 2940
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 AACCTCTTGGATCAGAGCTGCCACGTTAGCAGAAAAGAATGCCAAGGCGGAACTAAATGC 3000
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 TTCAATCAACAACTTGATTTCAAAGATAAAAGTGAAGTGGCATTCTGGGAGAAATAGCTC 3060
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 CGGTGAGCTGAATATTAAAGATGCTATTCAGACAGCATTACAGGCATCTATTATGGACAT 3120
consensus_9258#1 ------------------------------------------------------------
consensus_9258#0 ACTGTTGCCTGATCCGCTGACATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAA 3180
consensus_9258#1 ---------------------ATTCAGCTTTAGACATGCCAAGGATGGAACAACAGCCAA 39
***************************************
consensus_9258#0 AACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCT 3240
consensus_9258#1 AACTGACTCTTCGAAGGAGCCTGGTGACGGTTCCAGTCGTTCTGCTGATGAGAGTGTTCT 99
************************************************************
consensus_9258#0 GAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAA 3300
consensus_9258#1 GAGGTGTAAGGATCCTATATTTGCTAATGAAATGACCCATATGGAAGTTCAAATTCGCAA 159
************************************************************
consensus_9258#0 TAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGA 3360
consensus_9258#1 TAACACTAAGGAAACTATTCGGATGAACCTAAGCATTTCATGCAAAGATGTTGCTGGAGA 219
************************************************************
consensus_9258#0 GAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATA 3420
consensus_9258#1 GAATTGCTTCGACGAAAATAGCGCAACTGTCCTCTGGGCTGGTGTTCTTAGTGACATATA 279
************************************************************
consensus_9258#0 TCTGGAGGTTCAACCACTGCAGGAGGTAGTACATCCTTTTTCTATCTACTTCCTGGTCCC 3480
consensus_9258#1 TCTGGAGGTTCAACCCCTGCAGGAGGTAGTACATCCTTTTTCTATATACCTCCCA--CGG 337
*************** ***************************** *** *** *
consensus_9258#0 CGGAGACTACTCGCTGCAAGCTGCTTCTGTTATAATTGACGCAACCGATGTTCTTCGTGC 3540
consensus_9258#1 CGAGGGCACGCAGCCGCCGAGCACGAAC-TTGAGGCGGAGGCAGCCGCCGCCCCTCG-GC 395
** * * ** ** * ** ** *** *** * * *** **
consensus_9258#0 TCGGGCAAAGGCAGAGTCGCCCGACGAACCTA-TACTATG-CCGTGGATCTCCATTCCAT 3598
consensus_9258#1 TGGTGCGCGAAGGGGCTCTTTTGGTGCTCCGAGTAGTAGGGCCGCAG----CGAGGCGAG 451
* * ** * ** * * ** * ** ** * *** * * * * *
consensus_9258#0 ATCCATGTAGTTGGTACAGCTTAGCCGGACTTTCTTGGATTTAGTCTAGAGCGTGCCCTG 3658
consensus_9258#1 GTCGACGC-GCGCGTGCCGCGCCACCAGCGCCGCGTAGTCGCGG----AGGCGCGCCG-G 505
** * * * ** * ** ** * * * * * *** *** *
consensus_9258#0 TATCGTGCGTGAGTTTCGTGACATGTGCAGCTGCGAAGATC----ATGTAGAATTTTTAT 3714
consensus_9258#1 CGAGATCGGCCCGCCCACCGGCA-GCACCGCCACGCGGATCGCCGACCCGGACTCGATGC 564
* * * * ** * * ** ** **** * ** * *
consensus_9258#0 GCACATCTGATTTATTTGAGCCGCATGAAGGCTTCCCTGTAACACAGTTGTGTTTTGTAC 3774
consensus_9258#1 TCACGCCGGGCTCCATGGCGTC-CGCTCGCCTCGCCTCGCCTCGCCTGCTCGGCTTCGGT 623
*** * * * * * * * * ** * * * * **
consensus_9258#0 AGTGTAAAAGCATAGTGAAGGTTGTTTCAC 3804
consensus_9258#1 AATGGCAGATCTGACGAAGAGGGGAGTCAG 653
* ** * * * * * * * ***
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||