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Oryza sativa
cluster # 9266 cluster # 9266       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9266#0 length = 1896 sequences # 5  
consensus_9266#1 length = 914 sequences # 1  

consensusID : consensus_9266#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1896
fasta sequence
                              [GCTAACCAAAAAAGTGGAACACGAAGAAGAAGCAGCAGAAGAGGAGGAGCATCTCGCAACCACCGGATCGATTCATCCACCAATCCATCGCCGCCGCCGCCGCCGACGACGACGACGAGGGCTTCGGGCTTCACCGCCATGGGATGCAGCGGCCTCCGCCTCCCCACCTGGGCGGCGGCCGCGCCGCCGTCGCCGTCGGACTGGGACGGGCGGGTCACCCCGGGTCGGGACCGCGGAGCACGACTGGCTGTGGGATTGCCGCGGCATCGGCGGGG-G-CGGGAGGGACTACG-CTAGGGAGATGGAGGTCGCGGTGCGCGTCGTGCAGGCCGCCTGCACCCTCTGCCAGCGCGTGCAGAGCTCGCTCCTCCTCCCCGCCTCCGCCTCCGCCTCCGGCAGCGTCCACTCCAAGATCGACCGC-TCCCCCGTCACCGTCGCAGATTGGGGCGTCCAAGCGATAGTAAGCTGGCTACTCTCGGATTGCTTTCAAGATGAAAACATATCTATAGTAGCCGAAGAAGATGATGAGACGCTATCTAGTAGCGATGGTGCAGCTTTGCTTGAATCTGTCGTTGCTGCTGTCAATGGTTGCTTGATTGAAGCTCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGAAGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTGGCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGGATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCAACCATTAGTTCATGACTTTGGCAAGCTTGATTGGCGTAATTCAAGAGAGGTCCGAGTATCAACTGTTAGTGATCCAATCTCAGCAACATTCTGTGAACCCGTTGAGAAAGCTAATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACGAGGGGATGTAGAAATATTCATGAAATTCGCTAGAGCTGGAT-A-CAAGGAGAAGATA-TGGGATCA-TGCCGCTGGGGTGGTTATCATTCGAGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTGTTTTCTTAGAGGGCTTGGATAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACAGAATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACA-CTGTAATGCAAATAGTACGGATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGCAAAGGTGAGTTTTACA-AAGAATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAGTATGTGTTCATTTCAGTTCGATTTACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCAAGTTGTGAGA-CGAGA-TTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTTCTCGCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAAGTTACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTTGATTAACTGATTGAATGATGATTACATGATGTATTCTCTGCCACGCAAAAAAAA]

[+] EMBL AK065057             [GCTAACCAAAAAAGTGGAACACGAAGAAGAAGCAGCAGAAGAGGAGGAGCATCTCGCAACCACCGGATCGATTCATCCACCAATCCATCGCCGCCGCCGCCGCCGACGACGACGACGAGGGCTTCGGGCTTCACCGCCATGGGATGCAGCGGCCTCCGCCTCCCCACCTGGGCGGCGGCCGCGCCGCCGTCGCCGTCGGACTGGGACGGGCGGGTCACCCCGGGTCGGGACCGCGGAGCACGACTGGCTGTGGGATTGCCGCGGCATCGGCGGGG G CGGGAGGGACTACG CTAGGGAGATGGAGGTCGCGGTGCGCGTCGTGCAGGCCGCCTGCACCCTCTGCCAGCGCGTGCAGAGCTCGCTCCTCCTCCCCGCCTCCGCCTCCGCCTCCGGCAGCGTCCACTCCAAGATCGACCGC TCCCCCGTCACCGTCGCAGATTGGGGCGTCCAAGCGATAGTAAGCTGGCTACTCTCGGATTGCTTTCAAGATGAAAACATATCTATAGTAGCCGAAGAAGATGATGAGACGCTATCTAGTAGCGATGGTGCAGCTTTGCTTGAATCTGTCGTTGCTGCTGTCAATGGTTGCTTGATTGAAGCTCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGAAGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTGGCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGGATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCAACCATTAGTTCATGACTTTGGCAAGCTTGATTGGCGTAATTCAAGAGAGGTCCGAGTATCAACTGTTAGTGATCCAATCTCAGCAACATTCTGTGAACCCGTTGAGAAAGCTAATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACGAGGGGATGTAGAAATATTCATGAAATTCGCTAGAGCTGGAT A CAAGGAGAAGATA TGGGATCA TGCCGCTGGGGTGGTTATCATTCGAGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTGTTTTCTTAGAGGGCTTGGATAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACAGAATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACA CTGTAATGCAAATAGTACGGATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGCAAAGGTGAGTTTTACA AAGAATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAGTATGTGTTCATTTCAGTTCGATTTACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCAAGTTGTGAGA CGAGA TTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTTCTCGCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAAGTTACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTTGATTAACTGATTGAATGATGATTACATGATGT                      ]
[+] EMBL CB673636             [                                                                                                                                                                                                                                                                            aGCGGGGTGCCGTGAGGGACTACGTCTAGGGAGATGGAGGTCGCGGTGCGCGTCATGCAGGCCGCCTGCACCCTCTGCCAGCGCGTGCAGAGCTCGCTCCTCCTCCCCGCCTCCGCCTCCGCCTCCGGCAGCGTCCACTCCAAGATCGACCGCATCCCCCGTCACCGTCGCAGATTGGGGCGTCCAAGCGATAGTAAGCTGGCTACTCTCGGATTGCTTTCAAGATGAAAACATATCTATAGTAGCCGAAGAAGATGATGAGACGCTATCTAGTAGCGATGGTGCAGCTTTGCTTGAATCTGTCGTTGCTGCTGTCAATGGTTGCTTGATTGAAGCTCCGAAGGATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGGTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGATGCTCTCACGCTAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB673637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTGTAGGCTAAAGGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACGAGGGGATGTAGAAATATTCATGAAATTCGCTAGAGCTGGAT A CAAGGAGAAGATA TGGGATCA TGCCGCTGGGGTGGTTATCATTCGAGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTGTTTTCTTAGAGGGCTTGGATAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACAGAATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACA CTGTAATGCAAATAGTACGGATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGCAAAGGTGAGTTTTACA AAGAATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAGTATGTGTTCATTTCAGTTCGATTTACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCAAGTTGTGAGA CGAGA TTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTTCTCGCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAAGTTACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTGGATTAACTGATTGAATGATGATTACATGATGT                      ]
[+] EMBL BM418787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGGATGACCAAGGAGAAGATACTGGGATCAGTGCCGCTGGGGTGGTTATCATTCGAGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTGTTTTCTTAGAGGGCTTGGACAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACAGAATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACACCTGTAATGCAAATAGTACGGATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGC AAGGTGAGTTTTACACAAGAATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAATATGTGTTCATTTCAGTTCGATTTACGAAC CGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCACNTTGTGAGACCGAGATTTGGCATATTAaaa                                                                                                                                                                                           ]
[+] EMBL BI811808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccCAG ATTGT GGTGCTGTCGATGCAA CTGGAACTCATCCACA CTGTAA  CCAATAGTACGGATGATTACA TTGGTTGGACCAAT TCGGTCATAGAATGCAAAGGTGAGTTTTACA AAGAATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAATATGTGTTCATTTCAGTTCGATTTACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCAAGTTGTGAGA CGAGA TTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTTCTCGCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAAGTTACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTTGATTAACTGATTGAATGATGATTACATGATGTATTCTCTGCCACGCAAAAAAAA]


>consensus_9266#0 GCTAACCAAAAAAGTGGAACACGAAGAAGAAGCAGCAGAAGAGGAGGAGCATCTCGCAAC CACCGGATCGATTCATCCACCAATCCATCGCCGCCGCCGCCGCCGACGACGACGACGAGG GCTTCGGGCTTCACCGCCATGGGATGCAGCGGCCTCCGCCTCCCCACCTGGGCGGCGGCC GCGCCGCCGTCGCCGTCGGACTGGGACGGGCGGGTCACCCCGGGTCGGGACCGCGGAGCA CGACTGGCTGTGGGATTGCCGCGGCATCGGCGGGGGCGGGAGGGACTACGCTAGGGAGAT GGAGGTCGCGGTGCGCGTCGTGCAGGCCGCCTGCACCCTCTGCCAGCGCGTGCAGAGCTC GCTCCTCCTCCCCGCCTCCGCCTCCGCCTCCGGCAGCGTCCACTCCAAGATCGACCGCTC CCCCGTCACCGTCGCAGATTGGGGCGTCCAAGCGATAGTAAGCTGGCTACTCTCGGATTG CTTTCAAGATGAAAACATATCTATAGTAGCCGAAGAAGATGATGAGACGCTATCTAGTAG CGATGGTGCAGCTTTGCTTGAATCTGTCGTTGCTGCTGTCAATGGTTGCTTGATTGAAGC TCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGC TATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGT GGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGA AGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTG GCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGG ATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCA ACCATTAGTTCATGACTTTGGCAAGCTTGATTGGCGTAATTCAAGAGAGGTCCGAGTATC AACTGTTAGTGATCCAATCTCAGCAACATTCTGTGAACCCGTTGAGAAAGCTAATACAAG TCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGGAAGCAACCCCTGCGTGT GTACAGCATGGTGAAATATGCCGCAATAGCACGAGGGGATGTAGAAATATTCATGAAATT CGCTAGAGCTGGATACAAGGAGAAGATATGGGATCATGCCGCTGGGGTGGTTATCATTCG AGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTGT TTTCTTAGAGGGCTTGGATAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACAG AATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACACTGTAATGCAAATAGTACGG ATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGCAAAGGTGAGTTTTACAAAGA ATTGCTGTTGTGCCCTCTGGTTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCTCCT ACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAGTATGTGTTCATTTCAGTTCGATTT ACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAAGCA AGTTGTGAGACGAGATTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTTCTC GCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAAGTT ACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTTGATTAACTGATTGAATGA TGATTACATGATGTATTCTCTGCCACGCAAAAAAAA



consensusID : consensus_9266#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 914
fasta sequence
                              [TCAATGGTTGCTTGATTGAAGCTCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGAAGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTGGCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGGATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCAACCATTAGTTCATGACTTTGGCAAGCTTGATTGCGTAATTCAGGAGAGGTCGAGTATCAACTGTTAGGATCCAATCTCAGCAACCATCTGTGAACCCGTTGAGAAAGCTAATACAAGTCATTCCTTCACTGGCTGACTTGCTCAAGTGTAGGCTTAAGGAAGCACCCCCTTGCTGTGTACAGCATGGGTGAATATGCCGCANTAGCCCGAAGGGATGTGAAAATATCATGAAATTCGTTGAGCCTGGATCCANGGGGAAATATTTGACCATGCCCCCTTGGGTGTATATTCGAAACCTTGGCGGAGATCCAAAGCTGGGGCCGCCACTTAATTTTCCGAGGTTCTTAGGGCTGGATAGAGCAAAACTGTCCGCCATTGTTACCCAAATGAGCTGTTGTGGCGGACTTCACTGTACCTATACGGGAAAATTGGCAATGCCCCTAACAGGGGTCAAAAAGATGCCCTGTAAGTGCGCTTATTATTTCTCTAGAATTAATTTGAGACAACTGAGCTTACGATCCACATAGAGATA]

[+] EMBL AW155232             [TCAATGGTTGCTTGATTGAAGCTCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGAAGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTGGCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGGATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCAACCATTAGTTCATGACTTTGGCAAGCTTGATTGCGTAATTCAGGAGAGGTCGAGTATCAACTGTTAGGATCCAATCTCAGCAACCATCTGTGAACCCGTTGAGAAAGCTAATACAAGTCATTCCTTCACTGGCTGACTTGCTCAAGTGTAGGCTTAAGGAAGCACCCCCTTGCTGTGTACAGCATGGGTGAATATGCCGCANTAGCCCGAAGGGATGTGAAAATATCATGAAATTCGTTGAGCCTGGATCCANGGGGAAATATTTGACCATGCCCCCTTGGGTGTATATTCGAAACCTTGGCGGAGATCCAAAGCTGGGGCCGCCACTTAATTTTCCGAGGTTCTTAGGGCTGGATAGAGCAAAACTGTCCGCCATTGTTACCCAAATGAGCTGTTGTGGCGGACTTCACTGTACCTATACGGGAAAATTGGCAATGCCCCTAACAGGGGTCAAAAAGATGCCCTGTAAGTGCGCTTATTATTTCTCTAGAATTAATTTGAGACAACTGAGCTTACGATCCACATAGAGATA]


>consensus_9266#1 TCAATGGTTGCTTGATTGAAGCTCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCA AAGCTCATGATATTCTTCAAGCTATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAA GGTTTTGGGTGCTTGATCCTGTGGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACG CTGTTGCTCTCGCGCTAATTGAAGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAA ATTATCCAATGAAGAAGGAGTGGCTCAACTACCACCAACGATATTACAGGTTGATGTCTA AGGTTTCTCCTCCCACATCAGGATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAG GATGTGGCCAAGCTTGGATGCAACCATTAGTTCATGACTTTGGCAAGCTTGATTGCGTAA TTCAGGAGAGGTCGAGTATCAACTGTTAGGATCCAATCTCAGCAACCATCTGTGAACCCG TTGAGAAAGCTAATACAAGTCATTCCTTCACTGGCTGACTTGCTCAAGTGTAGGCTTAAG GAAGCACCCCCTTGCTGTGTACAGCATGGGTGAATATGCCGCANTAGCCCGAAGGGATGT GAAAATATCATGAAATTCGTTGAGCCTGGATCCANGGGGAAATATTTGACCATGCCCCCT TGGGTGTATATTCGAAACCTTGGCGGAGATCCAAAGCTGGGGCCGCCACTTAATTTTCCG AGGTTCTTAGGGCTGGATAGAGCAAAACTGTCCGCCATTGTTACCCAAATGAGCTGTTGT GGCGGACTTCACTGTACCTATACGGGAAAATTGGCAATGCCCCTAACAGGGGTCAAAAAG ATGCCCTGTAAGTGCGCTTATTATTTCTCTAGAATTAATTTGAGACAACTGAGCTTACGA TCCACATAGAGATA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9266#0      GCTAACCAAAAAAGTGGAACACGAAGAAGAAGCAGCAGAAGAGGAGGAGCATCTCGCAAC 60
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CACCGGATCGATTCATCCACCAATCCATCGCCGCCGCCGCCGCCGACGACGACGACGAGG 120
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GCTTCGGGCTTCACCGCCATGGGATGCAGCGGCCTCCGCCTCCCCACCTGGGCGGCGGCC 180
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GCGCCGCCGTCGCCGTCGGACTGGGACGGGCGGGTCACCCCGGGTCGGGACCGCGGAGCA 240
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CGACTGGCTGTGGGATTGCCGCGGCATCGGCGGGGGCGGGAGGGACTACGCTAGGGAGAT 300
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GGAGGTCGCGGTGCGCGTCGTGCAGGCCGCCTGCACCCTCTGCCAGCGCGTGCAGAGCTC 360
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GCTCCTCCTCCCCGCCTCCGCCTCCGCCTCCGGCAGCGTCCACTCCAAGATCGACCGCTC 420
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CCCCGTCACCGTCGCAGATTGGGGCGTCCAAGCGATAGTAAGCTGGCTACTCTCGGATTG 480
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CTTTCAAGATGAAAACATATCTATAGTAGCCGAAGAAGATGATGAGACGCTATCTAGTAG 540
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CGATGGTGCAGCTTTGCTTGAATCTGTCGTTGCTGCTGTCAATGGTTGCTTGATTGAAGC 600
consensus_9266#1      --------------------------------------TCAATGGTTGCTTGATTGAAGC 22
                                                            **********************

consensus_9266#0      TCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGC 660
consensus_9266#1      TCCGAAGTATGGGCTGAGGTCCCCAGAGAAAGAGCTCAAAGCTCATGATATTCTTCAAGC 82
                      ************************************************************

consensus_9266#0      TATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGT 720
consensus_9266#1      TATTAGGAGGTGCAGCTCTATCGGAGGTCCAAAAGGAAGGTTTTGGGTGCTTGATCCTGT 142
                      ************************************************************

consensus_9266#0      GGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGA 780
consensus_9266#1      GGATGGCACGCTTGGGTTTGTACGTGGGGACCAATACGCTGTTGCTCTCGCGCTAATTGA 202
                      ************************************************************

consensus_9266#0      AGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTG 840
consensus_9266#1      AGATGGGGAAGTTGTATTGGGAGTTCTTGGGTGCCCAAATTATCCAATGAAGAAGGAGTG 262
                      ************************************************************

consensus_9266#0      GCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGG 900
consensus_9266#1      GCTCAACTACCACCAACGATATTACAGGTTGATGTCTAAGGTTTCTCCTCCCACATCAGG 322
                      ************************************************************

consensus_9266#0      ATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCA 960
consensus_9266#1      ATCCTGGCATAAGGGTTGTGTGATGTATGCTCACCGAGGATGTGGCCAAGCTTGGATGCA 382
                      ************************************************************

consensus_9266#0      ACCATTAGTTCATGACTTTGGCAAGCTTGATTGGCGTAATTCAAGAGAGGTCCGAGTATC 1020
consensus_9266#1      ACCATTAGTTCATGACTTTGGCAAGCTTGATTG-CGTAATTCAGGAGAGGTC-GAGTATC 440
                      ********************************* ********* ******** *******

consensus_9266#0      AACTGTTAGTGATCCAATCTCAGCAACATTCTGTGAACCCGTTGAGAAAGCTAATACAAG 1080
consensus_9266#1      AACTGTTAG-GATCCAATCTCAGCAACCATCTGTGAACCCGTTGAGAAAGCTAATACAAG 499
                      ********* *****************  *******************************

consensus_9266#0      TCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGGAAGCAACCCCTGCGTGT 1140
consensus_9266#1      TCATTCCTTCACTGGCTGACTTGCTCA-AGTGTAGGCTTAAGGAAGCACCCCCTTGCTGT 558
                      **************   ********** ******************** *****   ***

consensus_9266#0      GTACAGCATGGTGAAATATGCCGCAATAGCACGAGGGGATGTAGAAATATTCATGAAATT 1200
consensus_9266#1      GTACAGCATGGGTGAATATGCCGCANTAGCCCGAAGGGATGTGAAAATAT-CATGAAATT 617
                      ***********   *********** **** *** *******  ****** *********

consensus_9266#0      CGCTAGAGCTGGATACAAGGAGAAGATATGGGATCATGCCGC-TGGGGTGGTTATCATTC 1259
consensus_9266#1      CGTTGAGCCTGGATCCANGGGGAA-ATATTTGACCATGCCCCCTTGGGTG--TAT-ATTC 673
                      ** *    ****** ** ** *** ****  ** ****** * * *****  *** ****

consensus_9266#0      GAGAAGCTGGCGGAGTGATCACAGATGCTGGGGGCCGCCCACTCGACTTCTCCAGGGGTG 1319
consensus_9266#1      GAAACCTTGGCGGAG--ATC-CAAA-GCTGGGG-CCGCC-ACTTAATTTTCCGAGG---- 723
                      ** *   ********  *** ** * ******* ***** ***  * **  * ***    

consensus_9266#0      TTTTCTTAGAGGGCTTGGATAGAGGCATAATAGCCTGTTCCGGACCATTGCTTCATCACA 1379
consensus_9266#1      --TTCTTAGGG---CTGGATAGAG-CAAAACTGTCCG-------CCATTGTTAC----CC 766
                        ******* *    ********* ** **  * * *       ****** * *    * 

consensus_9266#0      GAATTGTGGGTGCTGTCGATGCAAGCTGGAACTCATCAACACTGTAATGCAAATAGTACG 1439
consensus_9266#1      AAAT-----GAGCTGTTGTGGCGGACTTCACTGTACCTATACGGGAA---AATTGGCAAT 818
                       ***     * ***** *  **   **  *    * * * ** * **   ** * * *  

consensus_9266#0      GATGATTACAGTTGGTTGGACCAATGTCGGTCATAGAATGCAAAGGTGAGTTTTACAAAG 1499
consensus_9266#1      GCCCCTAACAGG-GGTCAAAAAGATGCC--CTGTA-AGTGCGCTTATTATTTCTCTA--G 872
                      *    * ****  ***   *   *** *     ** * ***     * * ** *  *  *

consensus_9266#0      AATTGCTGTTGTGCCCTCTGG--TTGAAATCTGTTCAGCCATCTTATTCTCTGATAGTCT 1557
consensus_9266#1      AATTAAT-TTGAGACAACTGAGCTTACGATCCACATAGAGATA----------------- 914
                      ****  * *** * *  ***   **   ***     **  **                  

consensus_9266#0      CCTACGGGAAAATCAGCTATTTCTAGGTTGCAGAATTAGTATGTGTTCATTTCAGTTCGA 1617
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      TTTACGAACACGAAAGGTAATACTGCAGCACGTAATACGGTATATCCTGTTGTTCAATAA 1677
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GCAAGTTGTGAGACGAGATTGGCATATTATTAGCTGATTCAGTTAGTTCTTGTATCTCTT 1737
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      CTCGCCGTTTCTGCATGTGAAGTTGTCGGCGTAAGCTCCTGAAGGTCACAACTTGATTAA 1797
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      GTTACTCATCTGCAACTTGTTGGCACCTGAAATAACTGAACCTTTGATTAACTGATTGAA 1857
consensus_9266#1      ------------------------------------------------------------
                                                                                  

consensus_9266#0      TGATGATTACATGATGTATTCTCTGCCACGCAAAAAAAA 1896
consensus_9266#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)