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Oryza sativa
cluster # 9267 cluster # 9267       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9267#0 length = 906 sequences # 1  
consensus_9267#1 length = 875 sequences # 1  
consensus_9267#2 length = 875 sequences # 3  
consensus_9267#3 length = 463 sequences # 1  

consensusID : consensus_9267#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 906
fasta sequence
                              [ACCCCCGACGACGTCGACATCCACCCCGAACCGACTAACCCCGACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAAGACCGTCAAGTCGCAGCGTGCCATCCGTGGTGCTTCGCTCGATGTGATTAAAGAGCGCAGGACGATGCGGCCTGAGGGCCCGCAGCGCCGCAGGGCTTGTTGCATCAAGGAGAGCAAGGCCAAGAAGGCTGAGGCTGAAAAGGCCAGAAGGCCCAGAAGGCGCAGGGTGCTGGCGGAANGGCCAAAACCGGCGTCTGACGAGCAGCNGGGCCGCCAGGTGNCANCCNAAAGGTGCNGCANCACTCGTTAGAAAACCAGTTTGCANCAGATCACAAATACCCTATCGGACGAACTNNTNTACGGTCNTCTTTTTGATGATCCTGGAAACACAGGTTCGAAGGGGANCATACTTGGTAAAAGTTCGCGCATGCGACAACTTTTTGGGCCTTGCCNGAACGGGTATATTTATCCGGGGGGTGAAACTTTTTATTGCGGGGNGAACGCCGGCTGAGTGTAAAGAACTTTTTTTTTTCACAGGGTTCGGCGGTTTTTCTACCATCTGGCGCGCGCGGGTTTTAACGGAGAAAAAAAAAAAAAAAAGAGGGGGGCGCCCTCTTGTTTTTATCTCCCCCCCCCTCTTTTATGGAGGGGACCCTCATTTATGGAATTTCTCTCACTCT]

[+] EMBL AW155258             [ACCCCCGACGACGTCGACATCCACCCCGAACCGACTAACCCCGACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAAGACCGTCAAGTCGCAGCGTGCCATCCGTGGTGCTTCGCTCGATGTGATTAAAGAGCGCAGGACGATGCGGCCTGAGGGCCCGCAGCGCCGCAGGGCTTGTTGCATCAAGGAGAGCAAGGCCAAGAAGGCTGAGGCTGAAAAGGCCAGAAGGCCCAGAAGGCGCAGGGTGCTGGCGGAANGGCCAAAACCGGCGTCTGACGAGCAGCNGGGCCGCCAGGTGNCANCCNAAAGGTGCNGCANCACTCGTTAGAAAACCAGTTTGCANCAGATCACAAATACCCTATCGGACGAACTNNTNTACGGTCNTCTTTTTGATGATCCTGGAAACACAGGTTCGAAGGGGANCATACTTGGTAAAAGTTCGCGCATGCGACAACTTTTTGGGCCTTGCCNGAACGGGTATATTTATCCGGGGGGTGAAACTTTTTATTGCGGGGNGAACGCCGGCTGAGTGTAAAGAACTTTTTTTTTTCACAGGGTTCGGCGGTTTTTCTACCATCTGGCGCGCGCGGGTTTTAACGGAGAAAAAAAAAAAAAAAAGAGGGGGGCGCCCTCTTGTTTTTATCTCCCCCCCCCTCTTTTATGGAGGGGACCCTCATTTATGGAATTTCTCTCACTCT]


>consensus_9267#0 ACCCCCGACGACGTCGACATCCACCCCGAACCGACTAACCCCGACGACAACAGCAGACCT TCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTA AGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCC TTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGC ACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAAGACCGTCAAGTCGC AGCGTGCCATCCGTGGTGCTTCGCTCGATGTGATTAAAGAGCGCAGGACGATGCGGCCTG AGGGCCCGCAGCGCCGCAGGGCTTGTTGCATCAAGGAGAGCAAGGCCAAGAAGGCTGAGG CTGAAAAGGCCAGAAGGCCCAGAAGGCGCAGGGTGCTGGCGGAANGGCCAAAACCGGCGT CTGACGAGCAGCNGGGCCGCCAGGTGNCANCCNAAAGGTGCNGCANCACTCGTTAGAAAA CCAGTTTGCANCAGATCACAAATACCCTATCGGACGAACTNNTNTACGGTCNTCTTTTTG ATGATCCTGGAAACACAGGTTCGAAGGGGANCATACTTGGTAAAAGTTCGCGCATGCGAC AACTTTTTGGGCCTTGCCNGAACGGGTATATTTATCCGGGGGGTGAAACTTTTTATTGCG GGGNGAACGCCGGCTGAGTGTAAAGAACTTTTTTTTTTCACAGGGTTCGGCGGTTTTTCT ACCATCTGGCGCGCGCGGGTTTTAACGGAGAAAAAAAAAAAAAAAAGAGGGGGGCGCCCT CTTGTTTTTATCTCCCCCCCCCTCTTTTATGGAGGGGACCCTCATTTATGGAATTTCTCT CACTCT



consensusID : consensus_9267#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 875
fasta sequence
                              [GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCANGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAAGGCAAGGTTGCTGGCGGCAAGGGCCAAACCGGCGTCTGACGAGCAACAGGGCGCCNAGGGTCNCAGCANAAGGTTGCGCCAACACTCGTTAGAAAAACANGTNTGTCAGCAGATCACAAATACCCTATCGGACGAACTCTTCACCGCGTCTCTTTTTGATGAAATCTGGACGACGGCTCGAAGGCAACATACATGTTAGTTACGTCTATCACAACCTTCTGGCATGGCNGACCGGTTTTTGCTGGGTTGTAACCTTTATACGGGGGGGAGGCGGGTGTAAAGGATTTTTTTTCAAGGTCTCCGGGCTTTTCCAATTGCGGGGGAGTATTAACCAGGTGGTGTTAAAAAGAATCTTTTTAAAAAAAAAAAAATAATTTTTTCTTTTTTCTTTCTTTCTCCCCCGGGGTNNAAAANNNNNNNNNNNNNNNNNAAAAAAAANAATTCCCGCGAACCGCGGGCGCCGGCTGGGGG]

[+] EMBL AW155429             [GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCANGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAAGGCAAGGTTGCTGGCGGCAAGGGCCAAACCGGCGTCTGACGAGCAACAGGGCGCCNAGGGTCNCAGCANAAGGTTGCGCCAACACTCGTTAGAAAAACANGTNTGTCAGCAGATCACAAATACCCTATCGGACGAACTCTTCACCGCGTCTCTTTTTGATGAAATCTGGACGACGGCTCGAAGGCAACATACATGTTAGTTACGTCTATCACAACCTTCTGGCATGGCNGACCGGTTTTTGCTGGGTTGTAACCTTTATACGGGGGGGAGGCGGGTGTAAAGGATTTTTTTTCAAGGTCTCCGGGCTTTTCCAATTGCGGGGGAGTATTAACCAGGTGGTGTTAAAAAGAATCTTTTTAAAAAAAAAAAAATAATTTTTTCTTTTTTCTTTCTTTCTCCCCCGGGGTNNAAAANNNNNNNNNNNNNNNNNAAAAAAAANAATTCCCGCGAACCGCGGGCGCCGGCTGGGGG]


>consensus_9267#1 GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGA TCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGA ACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCG TTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCC GCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGC GCANGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCA AGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAAGGCAAGGTTGCTGGCG GCAAGGGCCAAACCGGCGTCTGACGAGCAACAGGGCGCCNAGGGTCNCAGCANAAGGTTG CGCCAACACTCGTTAGAAAAACANGTNTGTCAGCAGATCACAAATACCCTATCGGACGAA CTCTTCACCGCGTCTCTTTTTGATGAAATCTGGACGACGGCTCGAAGGCAACATACATGT TAGTTACGTCTATCACAACCTTCTGGCATGGCNGACCGGTTTTTGCTGGGTTGTAACCTT TATACGGGGGGGAGGCGGGTGTAAAGGATTTTTTTTCAAGGTCTCCGGGCTTTTCCAATT GCGGGGGAGTATTAACCAGGTGGTGTTAAAAAGAATCTTTTTAAAAAAAAAAAAATAATT TTTTCTTTTTTCTTTCTTTCTCCCCCGGGGTNNAAAANNNNNNNNNNNNNNNNNAAAAAA AANAATTCCCGCGAACCGCGGGCGCCGGCTGGGGG



consensusID : consensus_9267#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 875
fasta sequence
                              [GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTGTGTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCAGGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAGGCAAAGGTTGCTGGCGGCAAGGGCCAAACCGGTCGTCTGACGAGCAAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTGCCGCCAACACTCGTTAAGAAAACCAGGTTTTGTCAAGCAGATACACAAATACCCTTAATC-GAACGAACTTCTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCGAACATAGCATGATA-AAGTTTACGGTCTCATGCAACGAA-CCTTCTGGGGCCATTGGGCAGGACGGGATATGTATGTAC-TGCGGCTGCTGTTAAGCTCTTTATTTACGGCGGCGGCGGAACGGACGGACTGGAGTCGAAACGGAACTTTTTGTCTTTTGCCACAGGGTGCTCTCACCGGGCTTCTTTCTTGCCCAACCCCGCGTGGCCGGTAGCATGGAATCATTTTAAAACCAGGGATTTGCATGGGTTGCAAAAAAAAAAAAAAAAA]

[+] EMBL AW155488             [GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTGTGTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCAGGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAGGCAAAGGTTGCTGGCGGCAAGGGCCAAACCGGTCGTCTGACGAGCAAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTGCCGCCAACACTCGTTAAGAAAACCAGGTTTTGTCAAGCAGATACACAAATACCCTTAATC GAACGAACTTCTTCACGGCGTCTTCTTTTTTGATGAATCCTGNGAACGACGGTCTCCGAAAGGCGAACATAGCATGAAANAAG TTACGGTCTCATGCAACGAACCCTTCTGTGGCC TTGGGCAGGAACGGATATGTATG ACTTGGGGTTGTTG TAAACTCTTTA TTACGGC                                                                                                                                                               ]
[+] EMBL AT003725             [                                                                                                                                                                                                                                                                                                 nATTAAGGAGCGCAGGACGATNCGGCCTGAGGCCCGCAGCACCGCCAGGGCTGCTGCCNTCAAGGAGAGCAAGGCAAGGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAGGCAAAGGTTGCTGGCGGCAAGGGCCAGACCGGTCGTCTGACGAGCAAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTGCCGCCAACACTCGTTAAGAAAACCAGGTTTTGTCAAGCAGATACACAAATACCCTT ATCGGAACGAACTTCTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCGAACATAGCATGATA AAGTTTACGGTCTCATGCAACGAA CCTTCTGGGGCCATTGGGCAGGACGGGATATGTATGTAC TGCGGCTGCTGTTAAGCTCTTTATTTACGGCGGCGGCGGAACGGACGGACTGGAGTCGAAACGGAACTTTTTGTCTTTTGCCACAGGGTGCTCTCACCGGGCTTCTTTCTTGCCCAACCCCGCGTGGCCGGTAGCATGGAATCATTTTAAAACCAGGGATTTGCATGGGTTGCAAAAAAAAAAAAAAAAA]
[+] EMBL AT003710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGGAGCGACGGTCTCCGAAAGGCGGACATAGCATGATA AAGTTTACGGTCTCATGCAACGAA CCTTCTGGGGCCATTGGGCAGGACGGGATATGTATGTAC TGCGGCTGCTGTTAAGCTCTTTATTTACGGCGGCGGCGGAACGGACGGACTGGAGTCGAAACGGAACTTTTTGTCTTTTGCCACAGGGTGCTCTCACCGGGCTTCTTTCTTGCCCAACCCTGCGTGGCCGGTAGCATGGAATCATTTTAAAACCAGGGATTTGCATGGGTTTAAAAAAAAAAAAAAAAAA]


>consensus_9267#2 GACGACAACAGCAGACCTTCAAGATGCGGACGTACGACGACACTGTGTCCGGCCAGAGGA TCTACCCCGGCAAGGGTAAGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGA ACGGAAAGTCCGAGTCCCTTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCG TTCTGTACCGCCGGGCGCACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCC GCAGGACCGTCAAGTCGCAGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGC GCAGGACGATGCGGCCTGAGGCCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCA AGGCAAAGAAGGCTGAGGCTGAGAAGGCCAAGAAGGCCGAGAAGGCAAAGGTTGCTGGCG GCAAGGGCCAAACCGGTCGTCTGACGAGCAAGCAGGGCGCCAAGGGTGCGCAGCAGAAGG TTGCCGCCAACACTCGTTAAGAAAACCAGGTTTTGTCAAGCAGATACACAAATACCCTTA ATCGAACGAACTTCTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCC GAAAGGCGAACATAGCATGATAAAGTTTACGGTCTCATGCAACGAACCTTCTGGGGCCAT TGGGCAGGACGGGATATGTATGTACTGCGGCTGCTGTTAAGCTCTTTATTTACGGCGGCG GCGGAACGGACGGACTGGAGTCGAAACGGAACTTTTTGTCTTTTGCCACAGGGTGCTCTC ACCGGGCTTCTTTCTTGCCCAACCCCGCGTGGCCGGTAGCATGGAATCATTTTAAAACCA GGGATTTGCATGGGTTGCAAAAAAAAAAAAAAAAA



consensusID : consensus_9267#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence
                              [GCCNCCAAGGGCCCANCCCGGTTCGTTTTAANANCNAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTNCCGCCAACNCCTCNTTAAAAAACCCAGGTTTGTCAAGCAAATACCCCAAAATCCCTTTTCGGAACNAACTTTNTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCNANCATAGCATGATAAAGTTTNCGGTNTCATGCAACGAACCTTCTGGGGCCATTGGGCAGGACGGNATATGTATGTACTGCGGCTGCTGTTAAGCTCTTTATTTACGTCGTCGTCGNAACGGACGGACTGGAGTCGAAACGGANCTTTTTGTCTTTTGCCNCAGGGTGCTCTCACCGGGCTTCTTTCTTGNCCAACCTTGCGTGGCCGGTAGCATGCNATCATTTTAAAACCAGGGATTTGCATGGGTTAANANAAAAAAAAAAAAAA]

[+] EMBL AT003555             [GCCNCCAAGGGCCCANCCCGGTTCGTTTTAANANCNAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTNCCGCCAACNCCTCNTTAAAAAACCCAGGTTTGTCAAGCAAATACCCCAAAATCCCTTTTCGGAACNAACTTTNTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCNANCATAGCATGATAAAGTTTNCGGTNTCATGCAACGAACCTTCTGGGGCCATTGGGCAGGACGGNATATGTATGTACTGCGGCTGCTGTTAAGCTCTTTATTTACGTCGTCGTCGNAACGGACGGACTGGAGTCGAAACGGANCTTTTTGTCTTTTGCCNCAGGGTGCTCTCACCGGGCTTCTTTCTTGNCCAACCTTGCGTGGCCGGTAGCATGCNATCATTTTAAAACCAGGGATTTGCATGGGTTAANANAAAAAAAAAAAAAA]


>consensus_9267#3 GCCNCCAAGGGCCCANCCCGGTTCGTTTTAANANCNAGCAGGGCGCCAAGGGTGCGCAGC AGAAGGTTNCCGCCAACNCCTCNTTAAAAAACCCAGGTTTGTCAAGCAAATACCCCAAAA TCCCTTTTCGGAACNAACTTTNTTCACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGA CGGTCTCCGAAAGGCNANCATAGCATGATAAAGTTTNCGGTNTCATGCAACGAACCTTCT GGGGCCATTGGGCAGGACGGNATATGTATGTACTGCGGCTGCTGTTAAGCTCTTTATTTA CGTCGTCGTCGNAACGGACGGACTGGAGTCGAAACGGANCTTTTTGTCTTTTGCCNCAGG GTGCTCTCACCGGGCTTCTTTCTTGNCCAACCTTGCGTGGCCGGTAGCATGCNATCATTT TAAAACCAGGGATTTGCATGGGTTAANANAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9267#2      -------------------------------------GACGACAACAGCAGACCTTCAAG 23
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      ACCCCCGACGACGTCGACATCCACCCCGAACCGACTAACCCCGACGACAACAGCAGACCT 60
consensus_9267#1      ------------------------------------------GACGACAACAGCAGACCT 18
                                                                                  

consensus_9267#2      ATGCGGACGTACGACGACACTGTGTCCGGCCAGAGGATCTACCCCGGCAAGGGTAAGCTC 83
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      TCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTA 120
consensus_9267#1      TCAAGATGCGGACGTACGACGACACTTTCTCCGGCCAGAGGATCTACCCCGGCAAGGGTA 78
                                                                                  

consensus_9267#2      TATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCCTTTTC 143
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      AGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCC 180
consensus_9267#1      AGCTCTATGTCCGTGGCGACAGCAAGATCTTCCGCTTCCAGAACGGAAAGTCCGAGTCCC 138
                                                                                  

consensus_9267#2      CTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGCACCGC 203
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      TTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGC 240
consensus_9267#1      TTTTCCTGCAGCGCAAGAACCCTCGCCGCATCGCATGGACCGTTCTGTACCGCCGGGCGC 198
                                                                                  

consensus_9267#2      AAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGCAGCGT 263
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      ACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAAGACCGTCAAGTCGC 300
consensus_9267#1      ACCGCAAGGGTATCTCTGAGGAGGTCGCCAAGAAGCGTACCCGCAGGACCGTCAAGTCGC 258
                                                                                  

consensus_9267#2      GCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCAGGACGATGCGGCCTGAGGCC 323
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      AGCGTGCCATCCGTGGTGCTTCGCTCGATGTGATTAAAGAGCGCAGGACGATGCGGCCTG 360
consensus_9267#1      AGCGTGCCATCGTTGGTGCTTCGCTCGATGTGATTAAGGAGCGCANGACGATGCGGCCTG 318
                                                                                  

consensus_9267#2      CGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAGGCTGAG 383
consensus_9267#3      ------------------------------------------------------------
consensus_9267#0      AGGGCCCGCAGCGCCGCAGGGCTTGTTGC-ATCAAGGAGAGCAAGGCCAAGAAGGCTGAG 419
consensus_9267#1      AGG-CCCGCAGCGCCGCCAGGGCTGCTGCCATCAAGGAGAGCAAGGCAAAGAAGGCTGAG 377
                                                                                  

consensus_9267#2      AAGGCCAAGAAGGCCGAGAAGGCAAAGGTTGCTGGCGGCAAGGGCCAAACC--GGTCGT- 440
consensus_9267#3      ---------------------------------GCCNCCAAGGGCCCANCCCGGTTCGT- 26
consensus_9267#0      GCTGAAAAGGCCA-GAAGGCCCAGAAGGCGCAGGGTGCTGGCGGAANGGCCAAAACCGGC 478
consensus_9267#1      GCTGAGAAGGCCAAGAAGGCCGAGAAAGGCAAGGTTGCTGGCGGCAAGGGCCAAACCGGC 437
                                                       *        **      *     **  

consensus_9267#2      -CTGACGAGCAAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTGCCGCCAACACTCGTTA 499
consensus_9267#3      -TTTAANANCNAGCAGGGCGCCAAGGGTGCGCAGCAGAAGGTTNCCGCCAACNCCTCNTT 85
consensus_9267#0      GTCTGACGAGCAGCNGGGCCGCCAGG-T-GNCANCCNAAAGGTGC-NGCANCAC-TCGTT 534
consensus_9267#1      GTCTGACGAGCAACAGGGCGCCNAGGGT-CNCAGCANAAGGTTGC-GCCAACAC-TCGTT 494
                                 * * ****  * *** *   ** *  ** * * *   ** * *    * 

consensus_9267#2      AGAAAACCAGGTTTTGTCAAGCAGATACACAAATACCCTTAATCG-AACGAACTT-CTTC 557
consensus_9267#3      AAAAAACCCAGGTTTGTCAAGCAAATACCCCAAAATCCCTTTTCGGAACNAACTTTNTTC 145
consensus_9267#0      AGAAAACC-AG-TTTG-CA-NCAGAT---CACAAATACCCTATCG-GACGAACTN--NTN 584
consensus_9267#1      AGAAAAAC-ANGTNTGTCA-GCAGAT---CACAAATACCCTATCG-GACGAACTC--TTC 546
                      * **** *    * ** **  ** **   *  * *  *    ***  ** ****    * 

consensus_9267#2      ACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCGAACATAGCA 617
consensus_9267#3      ACGGCGTCTTCTTTTTTGATGAATCCTGGGAACGACGGTCTCCGAAAGGCNANCATAGCA 205
consensus_9267#0      TACGGTCNT--CTTTTTGATGATCCTGGA--AACACAGGTTC--GAAGGGGANCATA-CT 637
consensus_9267#1      ACCGCGTCT--CTTTTTGATGAAATCTGG--ACGAC-GGCTC--GAAGGC-AACATA-CA 597
                         *    *   **********     *   *  ** *  **   ****  * **** * 

consensus_9267#2      TGATAAAGTTTACGGTCTCATGCAACGAACCTTCTGGGGCCATTGGGCAGGACGGGATAT 677
consensus_9267#3      TGATAAAGTTTNCGGTNTCATGCAACGAACCTTCTGGGGCCATTGGGCAGGACGGNATAT 265
consensus_9267#0      TGGTAAAAGTTCGCGCA---TGCGAC-AACTTTTTGGG-CCTT--GCCNGAACGGG-TAT 689
consensus_9267#1      TGTTAG----TTACGTC---TATCAC-AACCTTCTGG---CAT--GGCNGACCGGT-T-- 641
                      ** **     *   *     *   ** *** ** ***   * *  * * *  ***  *  

consensus_9267#2      GTATGTACTGCGGCTG---CTGTTAAGCTCTTTATTTACGGCG--GCGGCGGAACGGACG 732
consensus_9267#3      GTATGTACTGCGGCTG---CTGTTAAGCTCTTTATTTACGTCG--TCGTCGNAACGGACG 320
consensus_9267#0      ATTTATCCGGGGGGTGAAACTTTTTATTGCGGGGNGAACGCCGGCTGAGTGTAAAGAACT 749
consensus_9267#1      -TTTGCT---GGGTTGTAACCTTTA--TACGGGGGGGAGGC-----GGGTGTAAAGGATT 690
                       * *       ** **   *  **     *       * *          * ** * *  

consensus_9267#2      GACTGGAGTCGAAACGGAACTTTTTGTCTTTTGCCACAGG-GTGCTCTCACCGGGCTTCT 791
consensus_9267#3      GACTGGAGTCGAAACGGANCTTTTTGTCTTTTGCCNCAGG-GTGCTCTCACCGGGCTTCT 379
consensus_9267#0      TTTTTTTTTCACAGGGTTCGGCGGTTTTTCTACCATCTGGCGCGCGCGGGTTT--TAACG 807
consensus_9267#1      TTTTTT-----CAAGGTCTCCGGGCTTTTCCAATTGCGGGGGAGTATTAACCAGGTGGTG 745
                         *        *  *          * *       * ** * *                

consensus_9267#2      TTCTTGCCCAACCCCGCGTGGCCGGTAGCATGGAATCATTTTAAAACCAGGGATTTGCAT 851
consensus_9267#3      TTCTTGNCCAACCTTGCGTGGCCGGTAGCATGCNATCATTTTAAAACCAGGGATTTGCAT 439
consensus_9267#0      GAGAAAAAAAA------AAAAAAAAGAGGGGGGCGCCCTCTTGTTTTTATCTCCCCCCCC 861
consensus_9267#1      TTAAAAAGAATCTTTTTAAAAAAAAAAAAATAATTTTTTCTTTTTTCTTTCTTTCTCCCC 805
                               *                *           * **               *  

consensus_9267#2      -GGGTTGCAAAAAAAAAAAAAAAAA----------------------------------- 875
consensus_9267#3      -GGGTTAANANAAAAAAAAAAAAAA----------------------------------- 463
consensus_9267#0      CTCTTTTATGGAGGGGACCCTCATTTATGGAATTTCTCTCACTCT--------------- 906
consensus_9267#1      CGGGGTNNAAAANNNNNNNNNNNNNNNNNAAAAAAAANAATTCCCGCGAACCGCGGGCGC 865
                           *     *                                                

consensus_9267#2      ----------
consensus_9267#3      ----------
consensus_9267#0      ----------
consensus_9267#1      CGGCTGGGGG 875
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)