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Oryza sativa
cluster # 9276 cluster # 9276       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9276#0 length = 1702 sequences # 2  
consensus_9276#1 length = 1606 sequences # 3  
consensus_9276#2 length = 182 sequences # 1  

consensusID : consensus_9276#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1702
fasta sequence
                              [CCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAATGGTACGGGTGATGATGAACACTTCGTTTTCTTGCTTATCCACTAAAATGTAAATGACCCCTGTTTGACAATGATATTTTGTGCATACCAATATACCACATAAAGATTGCCAGGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTTCAGAATCAAGGTCTAGATATGACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCT-CATCACTAGAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTA-CCATTTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATG-CCAGAAGTACCGCTAA-CAGTTACTGGGTTGCTGAATT-CACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTG-AAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCT-GAAGGAAATAGGGGTACCAAT-GGGTCCTAGAAAGAAGATTCT-CCAGGCAGTGGCACCTTATTCAAAACGGCGTAGAT-GAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTGGAACATACTGAGTGTTAAAAAA]

[+] EMBL AK060688             [CCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAATGGTACGGGTGATGATGAACACTTCGTTTTCTTGCTTATCCACTAAAATGTAAATGACCCCTGTTTGACAATGATATTTTGTGCATACCAATATACCACATAAAGATTGCCAGGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTTCAGAATCAAGGTCTAGATATGACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCT CATCACTAGAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTA CCATTTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATG CCAGAAGTACCGCTAA CAGTTACTGGGTTGCTGAATT CACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTG AAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCT GAAGGAAATAGGGGTACCAAT GGGTCCTAGAAAGAAGATTCT CCAGGCAGTGGCACCTTATTCAAAACGGCGTAGAT GAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTGGAAC                  ]
[+] EMBL C96721               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gnACTTCAGGTCTCCATCACTAGAGACGCTCCTGATGCATTAAGAACTCANCCTTATGCTGGCAAGTCTACCCATTTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATCCCTACAGCTCCTGTGATGCCCAGAAGTACCGCTAACCAGTTACTGGNTTNCTGAATTCCACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTGAAAGAGGTGGATATGGCTNCATTGAGTCAGATGGGAGACAGTGACCTGGAAGGAAATAGGGGTACCAATGGGGTCCTAGAAAGAAGATTCTCCCAGGCAGTGGCACCTTATTCAAAACGGCGTAGATGGAACAGCATGCTCAGGAACTTGGGGCGTTCNTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTGGAACATACTGAGTGTTAAAAAA]


>consensus_9276#0 CCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCGCCAA TTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCC TCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGC GATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGG TCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGG AAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGA TGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAA TGGTACGGGTGATGATGAACACTTCGTTTTCTTGCTTATCCACTAAAATGTAAATGACCC CTGTTTGACAATGATATTTTGTGCATACCAATATACCACATAAAGATTGCCAGGTCGGTA GGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAAC AGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACGGAGGTATG ATGCAAGAGGACATGTTTCAGAATCAAGGTCTAGATATGACGGAAGAGATAAAATTCCAG AATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCAAGGACATCTGCTCTTC CTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTCTTCAAGAG AAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACTTAAAAGTG CTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCCACCCATTA GATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGACGCTCCTGATGCATTAA GAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACAACTCAGCCAGCAAATG GAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATGCCAGAAGTACCGCTAA CAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTG AAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCTGAAGGAAATAGGGG TACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCTTATTCAAAACGGCGTA GATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTATTGGTGTAA GCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCA TTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATG ATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATG TAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGAT GACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTG GAACATACTGAGTGTTAAAAAA



consensusID : consensus_9276#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1606
fasta sequence
                              [GAGTCCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAATGATTGCCAGGTCGGTA-GGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATGACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATG-GCATGAGAGAGAGGCTCCCTGAGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATGCCAGAAGTACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCTGAAGGAAATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCTTATTCAAAACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTGGAACATACTAGTGTTAAGATTGTGT]

[+] EMBL AK102302             [GAGTCCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAATGATTGCCAGGTCGGTA GGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATGACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATG GCATGAGAGAGAGGCTCCCTGAGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATGCCAGAAGTACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTCTTCCTCTTCCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCTGAAGGAAATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCTTATTCAAAACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGAGTTTACTGGAACATACTAGTGTTAAGATTGTGT]
[+] EMBL C91845               [                                               AATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAATGATTGCCAGGTCGGTAGGGGTTGATTTGAGATTGAAGCTTATGAAGAAAGCTTTGTCTAGCAATGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA750090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        A GGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGGTGCAGAACAGAACGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATAAACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATGACGGAAGAGAT AGATT CAGAATTA  GTC AGATATGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_9276#1 GAGTCCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCG CCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGC CGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGG CGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCA GCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACT TAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGT ATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAG ATAATGATTGCCAGGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGT CTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAAC CTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATG ACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTG AGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGT TGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGT CCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATA TTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTA GAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTG ATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTG TGATGCCAGAAGTACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGT ATGTCTTCCTCTTCCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACA GTGACCTGAAGGAAATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGG CACCTTATTCAAAACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGC AATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAG TGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCAT AATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGC AGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCT TTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAG CGTTGGCAATTGAGTTTACTGGAACATACTAGTGTTAAGATTGTGT



consensusID : consensus_9276#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 182
fasta sequence
                              [TCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGTGCCGCCTCCNGCTCCTCCCTCCNAGCAGNGCCGNCGTCGTCGTCCCTNTCACCNGCGGGTGGCGGAGATGAGNCTTCCTCGGCGTCGTGNATCCAGGNACCAGGGTCA]

[+] EMBL OSC106151            [TCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGTGCCGCCTCCNGCTCCTCCCTCCNAGCAGNGCCGNCGTCGTCGTCCCTNTCACCNGCGGGTGGCGGAGATGAGNCTTCCTCGGCGTCGTGNATCCAGGNACCAGGGTCA]


>consensus_9276#2 TCCAATCGGCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCT CCTCCACGCGCCGTGCCGCCTCCNGCTCCTCCCTCCNAGCAGNGCCGNCGTCGTCGTCCC TNTCACCNGCGGGTGGCGGAGATGAGNCTTCCTCGGCGTCGTGNATCCAGGNACCAGGGT CA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9276#0      ----CCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCG 56
consensus_9276#1      GAGTCCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCGGCCAATCG 60
consensus_9276#2      --------------------------------------------TCCAATCGGCCAATCG 16
                                                                  ****************

consensus_9276#0      CCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGC 116
consensus_9276#1      CCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGCGC 120
consensus_9276#2      CCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACGCGCCGTGC 76
                      ********************************************************* **

consensus_9276#0      CGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGG 176
consensus_9276#1      CGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCGGCGGGTGG 180
consensus_9276#2      CGCCTCCNGCTCCTCCCTCCNAGCAGNGCCGNCGTCGTCGTCCCTNTCACCNGCGGGTGG 136
                      ******* ************ ***** **** ************* ***** ********

consensus_9276#0      CGGCGATG--GCCTCCTCGGCGTCGT-CATCCAGGCACCAGG-TCACCATCACCCTCGGC 232
consensus_9276#1      CGGCGATG--GCCTCCTCGGCGTCGT-CATCCAGGCACCAGG-TCACCATCACCCTCGGC 236
consensus_9276#2      CGGAGATGAGNCTTCCTCGGCGTCGTGNATCCAGGNACCAGGGTCA-------------- 182
                      *** ****   * *************  ******* ****** ***              

consensus_9276#0      CGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTG 292
consensus_9276#1      CGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTG 296
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      CACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAG 352
consensus_9276#1      CACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAG 356
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCAT 412
consensus_9276#1      TCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCAT 416
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      GGAGATAATGGTACGGGTGATGATGAACACTTCGTTTTCTTGCTTATCCACTAAAATGTA 472
consensus_9276#1      GGAGATAATG-------------------------------------------------- 426
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      AATGACCCCTGTTTGACAATGATATTTTGTGCATACCAATATACCACATAAAGATTGCCA 532
consensus_9276#1      -----------------------------------------------------ATTGCCA 433
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      GGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGG 592
consensus_9276#1      GGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGCAATGGTGG 493
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACG 652
consensus_9276#1      TGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAGAATATACG 553
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      GAGGTATGATGCAAGAGGACATGTTTCAGAATCAAGGTCTAGATATGACGGAAGAGATAA 712
consensus_9276#1      GAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATGACGGAAGAGATAA 613
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      AATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCAAGGACATC 772
consensus_9276#1      AATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCAAGGACATC 673
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTC 832
consensus_9276#1      TGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAGTTGGACTC 733
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACT 892
consensus_9276#1      TTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCTGAAAAACT 793
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCC 952
consensus_9276#1      TAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGTTCCATGCC 853
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      ACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGACGCTCCTGA 1012
consensus_9276#1      ACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGACGCTCCTGA 913
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACAACTCAGCC 1072
consensus_9276#1      TGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACAACTCAGCC 973
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      AGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATGCCAGAAGT 1132
consensus_9276#1      AGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATGCCAGAAGT 1033
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      ACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTCTTCCTCTT 1192
consensus_9276#1      ACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTCTTCCTCTT 1093
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      CCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCTGAAGGA 1252
consensus_9276#1      CCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGACCTGAAGGA 1153
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      AATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCTTATTCAAA 1312
consensus_9276#1      AATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCTTATTCAAA 1213
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      ACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTAT 1372
consensus_9276#1      ACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGTTCGTGGGCAATGACAATTTAT 1273
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAAT 1432
consensus_9276#1      TGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAATGGTCTAGTGCTCTAGTCAAT 1333
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      CCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTC 1492
consensus_9276#1      CCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTGGCATGCATAATCTTATCTGTC 1393
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      AGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACA 1552
consensus_9276#1      AGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCTTGTGTAGCAGGATCTGAAACA 1453
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      TGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGA 1612
consensus_9276#1      TGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTTCTTCCTCTTTGGGAATTGGGA 1513
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      ACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGA 1672
consensus_9276#1      ACATCGATGACCTGTAATCGAAATCCCATGCTTTATGACCTTGGGAGCGTTGGCAATTGA 1573
consensus_9276#2      ------------------------------------------------------------
                                                                                  

consensus_9276#0      GTTTACTGGAACATACTGAGTGTTAAAAAA---- 1702
consensus_9276#1      GTTTACTGGAACATACT-AGTGTTAAGATTGTGT 1606
consensus_9276#2      ----------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)