These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9291#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2342 fasta sequence [AGCACCCAAACTCGATCGAGAATTCGCTCCTCCTCACTCCGCCGCCCGACGACCTCGCCGGCGGCCGCCCCCACCCCGCCGGCCGCCGCTTCTGCTTCCCGCGGGGGGATCCCTTCCGCTCTTGAGCGGGACTCGTGAGCCCCAAGGCAGTGCCTCCTTCACTCAAAAAATTGTCTCCGATCTAATTAAGCCCTCCGCCGCCGCTGCCTCGCCTTCGCCATGGAGGAAGCCGTGCGGGTGGACCTCGACAAGCTCCCCATCAAGCGCCTCCACGCCATCGACGAGGCCGGCAACGAGCACTACCCGCCCGACACCAGCAGCGAGGAGCAGCGCCTCTCCGCCATCCGCCGCATCGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAGGACACCGCCCAGCAGCAGCAGCAGCAGGCATGGCCGTGGCAGGGCATGATGGAGAGCCTGCAGCAGGCGCAGCAGGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCCAATGATGCAGTGGCAGTCGCTGGGATGCTCAAGCCCAAATCGCTGCCAACCGAAACCTTAGTTGACACCGCAGTCTCTGCAGCCACCAAGCTTCAGCGCGTTCGGCATTTGTCACGCTACTTCAAACAATCTGCCAAAACAATGGAGCAGCAGTTCCAAAAAGAGTCTAGGTTCTATGGCTCATTAATCAGATTGCAGCAGAACTGGAAAGTGAAGCGGCAACGGTTTGGTGGAAGTGGTCCAGGAAGTGAGGGCTTCATGTTTGATCTGATCGACACTTCTCAATTGGACACAGCAGCAATGCCTCGACTGTCATCATTACCATTGATTCCAATTGACCAAGACTCATCAGGCACTTTGTCCGTACAAGTCCCTCAAAAATCTTGCCGTTTCTTGAGTCTTAATTTTCGAGGGGACAGTGCCAATGGTGTGGAAAACTACGGTCATAAACTGAAAGATGGCATCTCAAGCATCACTTCCTCTGAAACAGACAATGATGATGTCAATAAATCCATCAAACATGCACATTCTATTCTTCGCAACATCCACAAGTCAATATTTGAGGAGCAGGTATTTGATATGGTGATCCGTGAGACATTTGTCCAATCTCAAGGCATCAATGTGACTGGAATGCGTGAAGATTTTCTCCAATTAGCTATTGGTCAGGAATGTTCATTGTGCCTCTCGCTTGCTCATTCTGGAGATGGTAGTGACTCAGAAATGGTAGACCATGAAGACCATGCCAATTCAGAGGATGCCTCAAATCTTGTGTTGGTCACTATGAATGGGAAGCTGGACCCTTTAAGAAAAGACGTGACAGGGTTTCCTAATCCCAGAAGTCTGGAAATTTACTTGCTACAATTGTTTCATGAGAACATTCTTAGGAAGGTCAGGGAGAAATCCCTTAACATTGGTCGCTACCAAAGTCCTGCTCAGGTTGCAGGTGATGATTATGGCCTGCTAGGTCATTTCTGCTTGACAGTGGCTCACAGGATATTTTCTAACAAAGTACTCGTGGAGCTTGAGAGTGTGGTCAGCAGGGTTCCATATCTCCATTTGCGTTCTCTTCCTACTTGGCATTCTCGAACTTCCTCCTGGTCTCTATGCTTGAAAGTTCCTCAGCCTATCCTTGCTGCAGATCGGATTGCAAAGCCTTCTGATAACCATGAACTTAAGTACAAATCCAGGTCACAGTTCAATACTAAGGTGATCGTGAAAGATAGCCAAATTAGTCTAATGGGTGAAGGCTCCCCAAGCATTGCTGGATCATTGACTGGGAAGCCCTCCGATGGATATTTGGTAAATAGCTACAATTGTGACTTGGAGGACCTCCCAACAATGCTTCTGCAGCAGGTTGCTAGTCAAGTAATCCACTGGCTTCATGAAGAAGCATTGGTTCTCGGTATGAATGTGACTAGAGATTTCCTGTGCCTTTACTTTGATCTTGAGCAAGGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCAGGAGTTTGAGAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCTACCCTTATGGACCTGATAAATTTGTGTAACGCTGGCGCCCACCACTGACATCTATCTGAATATCCATGTAATATCACTTACTACCTTGTAGATTGGTCCTTTGCTTAGGCGAATGGAATCCTGTTGGCTGTTGCCCGCTATCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK065543 [AGCACCCAAACTCGATCGAGAATTCGCTCCTCCTCACTCCGCCGCCCGACGACCTCGCCGGCGGCCGCCCCCACCCCGCCGGCCGCCGCTTCTGCTTCCCGCGGGGGGATCCCTTCCGCTCTTGAGCGGGACTCGTGAGCCCCAAGGCAGTGCCTCCTTCACTCAAAAAATTGTCTCCGATCTAATTAAGCCCTCCGCCGCCGCTGCCTCGCCTTCGCCATGGAGGAAGCCGTGCGGGTGGACCTCGACAAGCTCCCCATCAAGCGCCTCCACGCCATCGACGAGGCCGGCAACGAGCACTACCCGCCCGACACCAGCAGCGAGGAGCAGCGCCTCTCCGCCATCCGCCGCATCGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAGGACACCGCCCAGCAGCAGCAGCAGCAGGCATGGCCGTGGCAGGGCATGATGGAGAGCCTGCAGCAGGCGCAGCAGGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCCAATGATGCAGTGGCAGTCGCTGGGATGCTCAAGCCCAAATCGCTGCCAACCGAAACCTTAGTTGACACCGCAGTCTCTGCAGCCACCAAGCTTCAGCGCGTTCGGCATTTGTCACGCTACTTCAAACAATCTGCCAAAACAATGGAGCAGCAGTTCCAAAAAGAGTCTAGGTTCTATGGCTCATTAATCAGATTGCAGCAGAACTGGAAAGTGAAGCGGCAACGGTTTGGTGGAAGTGGTCCAGGAAGTGAGGGCTTCATGTTTGATCTGATCGACACTTCTCAATTGGACACAGCAGCAATGCCTCGACTGTCATCATTACCATTGATTCCAATTGACCAAGACTCATCAGGCACTTTGTCCGTACAAGTCCCTCAAAAATCTTGCCGTTTCTTGAGTCTTAATTTTCGAGGGGACAGTGCCAATGGTGTGGAAAACTACGGTCATAAACTGAAAGATGGCATCTCAAGCATCACTTCCTCTGAAACAGACAATGATGATGTCAATAAATCCATCAAACATGCACATTCTATTCTTCGCAACATCCACAAGTCAATATTTGAGGAGCAGGTATTTGATATGGTGATCCGTGAGACATTTGTCCAATCTCAAGGCATCAATGTGACTGGAATGCGTGAAGATTTTCTCCAATTAGCTATTGGTCAGGAATGTTCATTGTGCCTCTCGCTTGCTCATTCTGGAGATGGTAGTGACTCAGAAATGGTAGACCATGAAGACCATGCCAATTCAGAGGATGCCTCAAATCTTGTGTTGGTCACTATGAATGGGAAGCTGGACCCTTTAAGAAAAGACGTGACAGGGTTTCCTAATCCCAGAAGTCTGGAAATTTACTTGCTACAATTGTTTCATGAGAACATTCTTAGGAAGGTCAGGGAGAAATCCCTTAACATTGGTCGCTACCAAAGTCCTGCTCAGGTTGCAGGTGATGATTATGGCCTGCTAGGTCATTTCTGCTTGACAGTGGCTCACAGGATATTTTCTAACAAAGTACTCGTGGAGCTTGAGAGTGTGGTCAGCAGGGTTCCATATCTCCATTTGCGTTCTCTTCCTACTTGGCATTCTCGAACTTCCTCCTGGTCTCTATGCTTGAAAGTTCCTCAGCCTATCCTTGCTGCAGATCGGATTGCAAAGCCTTCTGATAACCATGAACTTAAGTACAAATCCAGGTCACAGTTCAATACTAAGGTGATCGTGAAAGATAGCCAAATTAGTCTAATGGGTGAAGGCTCCCCAAGCATTGCTGGATCATTGACTGGGAAGCCCTCCGATGGATATTTGGTAAATAGCTACAATTGTGACTTGGAGGACCTCCCAACAATGCTTCTGCAGCAGGTTGCTAGTCAAGTAATCCACTGGCTTCATGAAGAAGCATTGGTTCTCGGTATGAATGTGACTAGAGATTTCCTGTGCCTTTACTTTGATCTTGAGCAAGGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCAGGAGTTTGAGAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCTACCCTTATGGACCTGATAAATTTGTGTAACGCTGGCGCCCACCACTGACATCTATCTGAATATCCATGTAATATCACTTACTACCTTGTAGATTGGTCCTTTGCTTAGGCGAATGGAATCCTGTTGGCTGTT ] [+] EMBL CF305939 [ GCTCTTGACCGGGACTCGTGAGCCCCAAGGCAGTGCCTCCTTCACTCAAAAAATTGTCTCCGATCTAATTAAGCCCTCCGCCGCCGCTGCCTCGCCTTCGCCATGGAGGAAGCCGTGCGGGTGGACCTCGACTTGTTTCCCATCAAGCGCCTCCACGCCATCGACGAGGCCGGCAATTTTCTCTACCCGCCCGACACCAGCAGCGAGGAGCAGCGCCTCTCCGCCATCCGCCGCATCGACTTCTCCTGGGTCATCGACAAGGACGCCAAGAAGCCCAAGAAGGACACCGCCCAGCAGCAGCAGCAGCAGGCATGGCCGTGGCAGGGCATGATGGAGAGCCTGCAGCAGGCGCAGCAGGAGCTCTCCGTCGTCATTGACCTCATCTCCACTGTCGAAGCCAATGATGCAGTGGCAGTCGCTGGGATGCTCAAGCCCAAATCGCTGCCAACCGAAACCTTAGTTGACACCGCAGTCTCTGCAGCCACCAAGCTTCAGCGCGTTCGGCATTTGTCACGCTACTTCAAACAATCTGCCAAAACAATGGAGCAGCAGTTCCAAAAAGAGTCTAGGTTCTATGG ] [+] EMBL CF308999 [ AAATCTTGCCGTTTCTTGAGTCTTAATTTTCGAGGGGACAGTGCCAATGGTGTGGAAAACTACGGTCATAAACTGAAAGATGGCATCTCAAGCATCACTTCCTCTGAAACAGACAATGATGATGTCAATAAATCCATCAAACATGCACATTCTATTCTTCGCAACATCCACAAGTCAATATTTGAGGAGCAGGTATTTGATATGGTGATCCGTGAGACATTTGTCCAATCTCAAGGCATCAATGTGACTGGAATGCGTGAAGATTTTCTCCAATTAGCTATTGGTCAGGAATGTTCATTGTGCCTCTCGCTTGCTCATTCTGGAGATGGTAGTGACTCAGAAATGGTAGACCATGAAGACCATGCCAATTCAGAGGATGCCTCAAATCTTGTGTTGGTCACTATGAATGGGAAGCTGGACCCTTTAAGAAAAGACGTGACAGGGTTTCCTAATCCCAGAAGTCTGGAAATTTACTTGCTACAATTGTTTCATGA ] [+] EMBL AA751545 [ cacgagGTGGAGCTTGAGAGTGTGGTCAGCAGGGTTCCATATCTCCATTTGCGTTCTCTTCCTACTTGGCATTCTCGAACTTCCTCCTGGTCTCTATGCTTGAAAGTTCCTCAGCCTATCCTTGCTGCAGATTGGATTGCAAAGCCTTCTGATAACCATGAACTTAAGTACAAATCCAGGTCACAGTTCAATACTAAGGTGATCGTGAAAGATAGCCAAATTAGTCTAATGGGTGAAGGCTCCCCAAGCATTGCTGGATCATTGACTGGGAAGCCCTCCGATGGATATTTGGTAAATAGCTACAATTGTGACTTGGAGGACCTCCCAACAATGCTTCTGCAGCAGGTTGCTAGTCAAGTAATCCACTGGCTTCATGAANAAGCATTGGTTCTCGGTATGAATGTGACTAGAGATTTCCTGTGCCTTTACTTTGATCTTGAGCAANGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCNGGANTTTGANAANCGTA GTTTTTGGGCTA ] [+] EMBL AU162359 [ AGATTTCCTGTGCCTTTACTTTGATCTTGAGCAAGGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCAGGAGTTTGAGAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCTACCCTTATGGACCTGATAAATTTGTGTAACGCTGGCGCCCACCACTGACATCTATCTGAATATCCATGTAATATCACTTACTACCTTGTAGATTGGTCCTTTGCTTAGGCGAATGGAATCCTGTTGGCTGTTGCCCGCTATCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU164845 [ AGATTTCCTGTGCCTTTACTTTGATCTTGAGCAAGGTGAAACGCTTGGCCTGGTGGCGAATGTTGACCCGGACGACACCTGTGGATGCATTTCTTGGTACCTTACTATTGATCACCCAACGGAGGATGGGAAGATGTCAGCAGATAGTCAGGAGTTTGAGAAGCGTAGGTTTTTGGGCTATGTTTCTCTTGAAGTATTGTACTCTACCCTTATGGACCTGATAAATTTGTGTAACGCTGGCGCCCACCACTGACATCTATCTGAATATCCATGTAATATCACTTACTACCTTGTAGATTGGTCCTTTGCTTAGGCGAATGGAATCCTGTTGGCTGTTGCCCGCTATCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||