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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9310#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 979 fasta sequence
[CTATCCACCCACACCAGCAAGCCGCTCAGGCGCGCTCTCCGCTCCACCGCCATGGCGTCCATCACCCTCCTCTCCCTCGCTCCCGCGGCCACATTGCTCCACCTCCCGGCCTCCACTTCGCTCTCCACCTCCTTCGTCGCCGCTCCAGGCCCCATCTCCGGCCGCCGGTCCGTCGTCCTCCGCGCCCGCCCGCGCCGCTGCGTCACGGTCGTGTGCAGCGCCGCGGCGGCCGAGGCCGCGGAGGCGGAGCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGGCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGCAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT-CTCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTACCTTGTTCCAAAAGTTCCACGTTCAACGAATTTTGAATCCGTGCGATATGCAAGCATTTTTTTTAAAAAAAAAGGA]
[+] EMBL AK066527 [CTATCCACCCACACCAGCAAGCCGCTCAGGCGCGCTCTCCGCTCCACCGCCATGGCGTCCATCACCCTCCTCTCCCTCGCTCCCGCGGCCACATTGCTCCACCTCCCGGCCTCCACTTCGCTCTCCACCTCCTTCGTCGCCGCTCCAGGCCCCATCTCCGGCCGCCGGTCCGTCGTCCTCCGCGCCCGCCCGCGCCGCTGCGTCACGGTCGTGTGCAGCGCCGCGGCGGCCGAGGCCGCGGAGGCGGAGCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGCCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGTAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT CTCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTACCTTGTTCCAAAAGTTCCACGTTCAACGAATTTTGAATCCGTGCG ]
[+] EMBL CB629883 [ TGCTCCACCTCCCGGCCTCCACTTCGCTCTCCACCTCCTTCGTCGCCGCTCCAGGCCCCATCTCCGGCCGCCGGTCCGTCGTCCTCCGCGCCCGCCCGCGCCGCTGCGTCACGGTCGTGTGCAGCGCCGCGGCGGCCGAGGCCGCGGAGGCGGAGCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGGCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGCAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT CTCCTTTACCCTTTTCTTTAAC ]
[+] EMBL CB633308 [ CCCGCGCCGCTGCGTCACGCTCGTGTGCAGCGCCGCGGCGGCCGAGGCCGCGGAGGCGGAGCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGGCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGCAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT CTCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTACCTTGTTCCAAAAGTTCCACGTTCAACGAATTTTGAATCCGTGCGATATGCAAG ]
[-] EMBL CB629884 [ GCCGCGGCGGCCGAGGCCGCGGAGGCGGAGCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGGCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGCAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT CTCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTCCCTTGTTCCAAAAGTTCGACGTTCAACGAATTTTGAATCCGTGCGATATG ]
[-] EMBL CB633309 [ GCCCGCGGAGAAGTTCCGGCTCGACAACCTGGGCCCGCAGAAGGGGTCGCGGCGGCGGCCGAAGCGGAAGGGGCGCGGTATCGCGGCGGGGCAGGGCGCGAGCTGCGGGTTCGGCATGCGTGGACAGAAGTCGCGCTCGGGGCCAGGCGTCCGGCGCGGGTTCGAGGGAGGGCAGATGCCGCTCTACCGCCGCATCCCCAAGCTGCGCGGCATTGCTGGAGGAATGCATATTGGCTTGCCGAAGTATGTGCCGTTCAATTTGAGAGACTTGGCGCGTGGCGGGTTCAAGGATGGTGACGAGATATCATTGGAATCCTTGAAATCGAGGGGTTTGATTAATCCGTCTGGCAGGGAGAGAAAGCTTCCTCTGAAGATTTTAGGAGATGGTGATGTATCAGTCAAGTTGAATATCAAGGCTGGGGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTTGCGCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTACCTTGTTCCAAAAGTTCCACGTTCAACGAATTTGGAATCCGTGCGATATGCAAGCATTTTTTTTAAAAAAAAAGGA]
[+] EMBL CB680536 [ GGCATTCTCTGCTTCAGCCAAGGAGAAGCTCGAGGCAGCTGGTTGTACTTTAAGTCTGGTACCAAAGCGGAAGAAATGGCTACCACAATCTTATCTGAAGAACCAAGCTCGTGCAGAAGAATACTTTAGCAAGAAAAATGGTGGTGCTGGTGAATCTGATGAAGCATCTGCATAGAATTCATATACACTGTACTT CTCCTTTACCCTTTTCTTTAACATATACTTATTTCTCTTACCTTGTTCCAAAAGTTCCACGTTCAACGAATTTTGAATCCGTGCGATATGCAAG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||