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Oryza sativa
cluster # 9323 cluster # 9323       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9323#0 length = 2105 sequences # 4  
 consensus_9323#1 length = 779 sequences # 1  
consensus_9323#2 length = 224 sequences # 1  
consensusID : consensus_9323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2105
fasta sequence 
                              [GTAAAGTTCAAAAAAAAAAAAAGAGTAGGTAGGAGTAGGAGCGATTCGACGGCAATCCCGATTCCGATTCCGATTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGGCGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGTCCACGGAATCAAGCCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGGATCCACGCGGCTTCCAAGGTCCCCGAGGCGTACACCATCAAGGCCATGGAGGAGTTCTACAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTCTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCCTGGGAACATGTGCCCCAATCTGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTGTGAAAACCCACAGGTCACCTCAACTCACTAGTATTTCACGCTGCACTTCTTTTCATTCTAAATTTGCTTAATTGTATTATTCTTTTTTTTTGCTGCAATGCGAATTATGCAATGCAATGCAGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGACGGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGTACTCCAACCGAAGAAACTCGACAAAGATTTTCTAGGGAAAACCATGCAGATAACACTTCAGGGCCATCAATTGTCCACGACAGATCACCCGTTTTGCAAAACCAGAATCTACCATCTCTTGCCCTGACCAATCCACCCTATTTGAAGAACCAGACCATGCCATCCTTTGTCCAGAACAATCTACCCAATTTGCAAAATCACAATCTGTCCTATTTGCCGCACCAGAATCTGTCGGCTGATGTCTCGAACAGGAGGGTATCGCTTTTGCAAAACCAGAGTCCATCGTCTCTTCTCCAAAGTGGTCAGTCCTATTTGCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTAGGTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGGAGGAGAGCAATCAGCTCCGAAAAGATGGCCTGAGTAAATATCTGTGAAATTACAGGAACTTCCTGCCCTTTTCGGAGGTTCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATGTGATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCCAGCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAATGAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGCATACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATTATAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGGAGAAGAGCCCAAAGAAATGGCAGCAAAACCCTCTTCTTTTTTTTTTCCGGAGGAGATACATTGATACTACTCCACTTCGATAGTAGTAGTCGTCGTCGTCTAGTAGATGCATAGAACTACTACTAGTATAGGAGTGTAGTGGCAGTGCTGGTGCAGTGTGAGGGAAGTCGTAATAGGACGGCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCTCGCGGATGGAATGTACTATGTTGGGATTGTCAATGGATGAGTACCACTTAGTAAAAAAAAGGATACACACTGCACCGCACACATATCGCTGCACACAAGTATATAGTACAGTATATATTTGTTGGCAAGGAATGGATGGAACCGA]

[+] EMBL AK066505             [GTAAAGTTCAAAAAAAAAAAAAGAGTAGGTAGGAGTAGGAGCGATTCGACGGCAATCCCGATTCCGATTCCGATTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGGCGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGTCCACGGAATCAAGCCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGGATCCACGCGGCTTCCAAGGTCCCCGAGGCGTACACCATCAAGGCCATGGAGGAGTTCTACAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTCTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCCTGGGAACATGTGCCCCAATCTGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTGTGAAAACCCACAGGTCACCTCAACTCACTAGTATTTCACGCTGCACTTCTTTTCATTCTAAATTTGCTTAATTGTATTATTCTTTTTTTTTGCTGCAATGCGAATTATGCAATGCAATGCAGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGACGGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGTACTCCAACCGAAGAAACTCGACAAAGATTTTCTAGGGAAAACCATGCAGATAACACTTCAGGGCCATCAATTGTCCACGACAGATCACCCGTTTTGCAAAACCAGAATCTACCATCTCTTGCCCTGACCAATCCACCCTATTTGAAGAACCAGACCATGCCATCCTTTGTCCAGAACAATCTACCCAATTTGCAAAATCACAATCTGTCCTATTTGCCGCACCAGAATCTGTCGGCTGATGTCTCGAACAGGAGGGTATCGCTTTTGCAAAACCAGAGTCCATCGTCTCTTCTCCAAAGTGGTCAGTCCTATTTGCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTAGGTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGG GGAGAGCAATCAGCTCCGAAAAGATGGCCTGAGTAAATATCTGTGAAATTACAGGAACTTCCTGCCCTTTTCGGAGGTTCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATGTGATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCCAGCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAATGAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGCATACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATTATAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGG                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB663518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTCACCTGTTCAAGGTCCACTGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGTACTCCAACCGAAGAAACTCGACAAAGATTTTCTAGGGAAAACCATGCAGATAACACTTCAGGGCCATCAATTGTCCACGACAGATCACCCGTTTTGCAAAACCAGAATCTACCATCTCTTGCCCTGACCAATCCACCCTATTTGAAGAACCAGACCATGCCATCCTTTGTCCAGAACAATCTACCCAATTTGCAAAATCACAATCTGTCCTATTTGCCGCACCAGAATCTGTCGGCTGATGTCTCGAACAGGAGGGTATCGCTTTTGCAAAACCAGAGTCCATCGTCTCTTCTCCAAAGTGGTCAGTCCTATTTGCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTAGGTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGGAGGAGAGCAATCAGCTCCGAAAAGATGGCCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB677470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTCCTATTTGCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTAGGTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGGAGGAGAGCAATCAGCTCCGAAAAGATGGCCTGAGTAAATATCTGTGAAATTACAGGAACTTCCTGCCCTTTTCGGAGGTTCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATGTGATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCCAGCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAATGAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGCATACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATTATAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGGAGAAGAGCCCAAAGAAATGGCAGCAAAACCCTCTTCTTTTTTTTTTCCGGAGGAGATACATTGATACTACTCCACTTCGATAGTAGTAGTCGTCGTCGTCTAGTAGATGCATAGAACTACTACTAGTATAGGAGTGTAGTGGCAGTGCTGGTGCAGTGTGAGGGAAGTCGTAATAGGACGGCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCTCGCGGATGGAATGTACTATGTTGGGATTGTCAATGGATGAGTACCACTTAGTAAAAAAAAGGA                                                                                  ]
[-] EMBL CB663519             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAACTTCCTGCCCTTTTCGGAGGTTCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATGTGATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCCAGCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAATGAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGCATACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATTATAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGGAGAAGAGCCCAAAGAAATGGCAGCAAAACCCTCTTCTTTTTTTTTTCCGGAGGAGATACATTGATACTACTCCACTTCGATAGTAGTAGTCGTCGTCGTCTAGTAGATGCATAGAACTACTACTAGTATAGGAGTGTAGTGGCAGTGCTGGTGCAGTGTGAGGGAAGTCGTAATAGGACGGCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCTCGCGGATGGAATGTACTATGTTGGGATTGTCAATGGATGAGTACCACTTAGTAACGCTCATGCTACACACTGCACCGCACACATATCGCTGCACACAAGTATATAGTACAGTATATATTTGTTGGCAAGGAATGGATGGAACCGA]




>consensus_9323#0
GTAAAGTTCAAAAAAAAAAAAAGAGTAGGTAGGAGTAGGAGCGATTCGACGGCAATCCCG
ATTCCGATTCCGATTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGG
CGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGT
CCACGGAATCAAGCCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGG
ATCCACGCGGCTTCCAAGGTCCCCGAGGCGTACACCATCAAGGCCATGGAGGAGTTCTAC
AGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTC
TCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCC
TGGGAACATGTGCCCCAATCTGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTGT
GAAAACCCACAGGTCACCTCAACTCACTAGTATTTCACGCTGCACTTCTTTTCATTCTAA
ATTTGCTTAATTGTATTATTCTTTTTTTTTGCTGCAATGCGAATTATGCAATGCAATGCA
GAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGACG
GATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATTT
CCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTC
CTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCG
AGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGTACTCCAACCGAAGA
AACTCGACAAAGATTTTCTAGGGAAAACCATGCAGATAACACTTCAGGGCCATCAATTGT
CCACGACAGATCACCCGTTTTGCAAAACCAGAATCTACCATCTCTTGCCCTGACCAATCC
ACCCTATTTGAAGAACCAGACCATGCCATCCTTTGTCCAGAACAATCTACCCAATTTGCA
AAATCACAATCTGTCCTATTTGCCGCACCAGAATCTGTCGGCTGATGTCTCGAACAGGAG
GGTATCGCTTTTGCAAAACCAGAGTCCATCGTCTCTTCTCCAAAGTGGTCAGTCCTATTT
GCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTAG
GTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGGAGGAGAGCAATCAGCTCCG
AAAAGATGGCCTGAGTAAATATCTGTGAAATTACAGGAACTTCCTGCCCTTTTCGGAGGT
TCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATGT
GATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCCA
GCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAAT
GAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGCA
TACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATTA
TAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGGAGAAGAGCCCAA
AGAAATGGCAGCAAAACCCTCTTCTTTTTTTTTTCCGGAGGAGATACATTGATACTACTC
CACTTCGATAGTAGTAGTCGTCGTCGTCTAGTAGATGCATAGAACTACTACTAGTATAGG
AGTGTAGTGGCAGTGCTGGTGCAGTGTGAGGGAAGTCGTAATAGGACGGCTCCAAGAAAG
CAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCTCGCGGATGGAATGTACTATG
TTGGGATTGTCAATGGATGAGTACCACTTAGTAAAAAAAAGGATACACACTGCACCGCAC
ACATATCGCTGCACACAAGTATATAGTACAGTATATATTTGTTGGCAAGGAATGGATGGA
ACCGA

consensusID : consensus_9323#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 779
fasta sequence 
                              [TTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGGCGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGTCCACGGAATCAAGCGCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGGATCCACGCGGCTTCCAAGGTCCCCGAGGCGGACACCATCAAGGCCATGGAGGAGTTCTACAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTCTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCCTGGGAACATGTGCCCCAATCTGTATCTACTCAACCCTACTCTATTACTACTACCTGCACCTTCCCAATTCCAATCATCTTCTTCACTACCTGCAGGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTGTGAAAACCCACAGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGACGGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGT]

[+] EMBL CB677469             [TTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGGCGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGTCCACGGAATCAAGCGCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGGATCCACGCGGCTTCCAAGGTCCCCGAGGCGGACACCATCAAGGCCATGGAGGAGTTCTACAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTCTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCCTGGGAACATGTGCCCCAATCTGTATCTACTCAACCCTACTCTATTACTACTACCTGCACCTTCCCAATTCCAATCATCTTCTTCACTACCTGCAGGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTGTGAAAACCCACAGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGACGGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGT]




>consensus_9323#1
TTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGGCGGGGGAAGGCTC
CGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGTCCACGGAATCAAG
CGCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTGGATCCACGCGGCT
TCCAAGGTCCCCGAGGCGGACACCATCAAGGCCATGGAGGAGTTCTACAGGGAGATTTAC
GCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGTCTCCCGCCTCCTC
GGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTCCTGGGAACATGTG
CCCCAATCTGTATCTACTCAACCCTACTCTATTACTACTACCTGCACCTTCCCAATTCCA
ATCATCTTCTTCACTACCTGCAGGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTT
GTGAAAACCCACAGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACA
ATTTAGAGAGACGGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCAC
TGCCTGTCAATTTCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTC
TTCAACTTCACTCCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCA
TAGCCGGAGCTCGAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGT

consensusID : consensus_9323#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence 
                              [TTTTCCGNNNNNNANNNATTGATACNANTCNNCTTCGATAGTAGTAGTCGTCGTCGNTTAGTAGNNNCATAGAACTANNNNNAGNATAGGAGNNNAGTNNNAGTGCTGGNNNAGTGTGAGGGANNNNNTAATAGGNNGNCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCNCGCGGATGGAATGNNNNATGTTGGGATTGTCAAA]

[-] EMBL CF196454             [TTTTCCGNNNNNNANNNATTGATACNANTCNNCTTCGATAGTAGTAGTCGTCGTCGNTTAGTAGNNNCATAGAACTANNNNNAGNATAGGAGNNNAGTNNNAGTGCTGGNNNAGTGTGAGGGANNNNNTAATAGGNNGNCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCNCGCGGATGGAATGNNNNATGTTGGGATTGTCAAA]




>consensus_9323#2
TTTTCCGNNNNNNANNNATTGATACNANTCNNCTTCGATAGTAGTAGTCGTCGTCGNTTA
GTAGNNNCATAGAACTANNNNNAGNATAGGAGNNNAGTNNNAGTGCTGGNNNAGTGTGAG
GGANNNNNTAATAGGNNGNCTCCAAGAAAGCAGCATGTGTGGATGTGGATTCCACGATTG
CAGCATTGCNCGCGGATGGAATGNNNNATGTTGGGATTGTCAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9323#0      GTAAAGTTCAAAAAAAAAAAAAGAGTAGGTAGGAGTAGGAGCGATTCGACGGCAATCCCG 60
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      ATTCCGATTCCGATTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGG 120
consensus_9323#1      -------------TTCCGATTGGATTGGAAGCACGGCGGCGGCGGCATGCGCGGCGGCGG 47
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGT 180
consensus_9323#1      CGGGGGAAGGCTCCGGAACCCTTGCCTGACGATGCACCAGCCGTGGGCGTCGCTGCTCGT 107
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CCACGGAATCAAGC-CGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTG 239
consensus_9323#1      CCACGGAATCAAGCGCGTCGAGGGCCGCTCATGGCCATCGCCCCTCACCGGGCGGCTTTG 167
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GATCCACGCGGCTTCCAAGGTCCCCGAGGCGTACACCATCAAGGCCATGGAGGAGTTCTA 299
consensus_9323#1      GATCCACGCGGCTTCCAAGGTCCCCGAGGCGGACACCATCAAGGCCATGGAGGAGTTCTA 227
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGT 359
consensus_9323#1      CAGGGAGATTTACGCCCTCGACGGAATCACCAACATCACCTTCCCGCACCACTACCCTGT 287
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTC 419
consensus_9323#1      CTCCCGCCTCCTCGGATGCGTCGAGGTGGTAGGCTGTGTCACCTCTCAAGAGCTTGCTTC 347
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CTGGGAACATGTGCCCCAATCTGTCAGGCTCGAAGCATTGACCGACTTCTGCTGGCTTTG 479
consensus_9323#1      CTGGGAACATGTGCCCCAATCTGT------------ATCTACTCAACCCTACTC-TATTA 394
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TGAAAACCCACAGGTCACCTCAACTCACTAGTATTTCACGCTGCACTTCTTTTCATTCTA 539
consensus_9323#1      CTACTACCTGCA--CCTTCCCAATTC-CAATCATCTT---CTTCACTACCTG-CAGGTCA 447
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AATTTGCTTAATTGTATTATTCTTTTTTTTTGCTGCAATGCGAATTATGCAATGCAATGC 599
consensus_9323#1      GGCTCGAAGCATTGACCGAC-------TTCTGCTG------GCTTTGTGAAAACCCA--C 492
consensus_9323#2      ------------------------------------------TTTTCCGNNNNNNAN--N 16
                                                                  **  *           

consensus_9323#0      AGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGAC 659
consensus_9323#1      AGAAACTGGTGGTTCCATTCGACATGCGTGGTTACCAGGGTGTTTACAATTTAGAGAGAC 552
consensus_9323#2      NATTGATACNANTCNNCTTCGATAGTAGTAGTCGTC--GTCGNTTAG----TAGNNNCAT 70
                            *     *    ***** *   ** **   *  *  * ***     ***    * 

consensus_9323#0      GGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATT 719
consensus_9323#1      GGATCTATGAGGGAGCAGTCAGGGGTCTTTCACCTGTTCAAGGTCCACTGCCTGTCAATT 612
consensus_9323#2      AGAACTANNNNN-AGNA--TAGGAGNNNAGTNNNAGTGCT-GGNNNAGTGTGAGGGANNN 126
                       ** ***      ** *   *** *          ** *  **   * **   *  *   

consensus_9323#0      TCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACT 779
consensus_9323#1      TCCCACTCCCTGACCCCACCAATCCCCTCTCTCTCAACCCTGGATCTCTTCAACTTCACT 672
consensus_9323#2      NNTAATAGGNNGNCTCCAAGAAAGCAGCATGTGTGGATG-TGGAT-TCCACGATTGCAGC 184
                          *      * * ***  **  *    * * *  *   ***** **  * * * **  

consensus_9323#0      CCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTC 839
consensus_9323#1      CCTCAAGGTCCGCCGCACTAGACAAATCTCCCAGTGTCACTGCCGCCATAGCCGGAGCTC 732
consensus_9323#2      ATT----GCNCGC------GGATGGAATGNNNNATGTTGGGATTGTCAAA---------- 224
                        *    *  ***       **   *        ***       * ** *          

consensus_9323#0      GAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGTACTCCAACCGAAG 899
consensus_9323#1      GAGCTGCCGCCACTCAGTATTCACGCAACAATACTGCTATTACTAGT------------- 779
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AAACTCGACAAAGATTTTCTAGGGAAAACCATGCAGATAACACTTCAGGGCCATCAATTG 959
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TCCACGACAGATCACCCGTTTTGCAAAACCAGAATCTACCATCTCTTGCCCTGACCAATC 1019
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CACCCTATTTGAAGAACCAGACCATGCCATCCTTTGTCCAGAACAATCTACCCAATTTGC 1079
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AAAATCACAATCTGTCCTATTTGCCGCACCAGAATCTGTCGGCTGATGTCTCGAACAGGA 1139
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GGGTATCGCTTTTGCAAAACCAGAGTCCATCGTCTCTTCTCCAAAGTGGTCAGTCCTATT 1199
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TGCAAAACCAGAATGCAGAGCCTCGGAGAAGTCCCAGACTACAAAATGAACCTCCCAGTA 1259
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GGTGGCACTGAGGGGATTGAAGCGAATGAATGTTAGTGAGGGAGGAGAGCAATCAGCTCC 1319
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GAAAAGATGGCCTGAGTAAATATCTGTGAAATTACAGGAACTTCCTGCCCTTTTCGGAGG 1379
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TTCCCCTTATAAAAGAAGAAAGATGAGAGTAGCATGTGCTATCACAAGACGAAAGCAATG 1439
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TGATTGTGATTTTTTGTGAAGGAAGCAAGCATGCAAAGGGGAAGTTTCATGTTGGCAGCC 1499
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AGCAAGCATGCATCTCTCTGTGACCCTGGCACGAAATTGCTTTGCTGTGGCGGGCGACAA 1559
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      TGAGGTCCCTTCCAGGAAGCGATTGTCATACTAGTACTACTGCCGCTGCTGTAGTAAAGC 1619
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      ATACTAGTGGCAAAGCCAAGCCCAAGGGATTCACTTTTTGTTACTGTAATGCACGTAATT 1679
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      ATAGTACTAAATCAGAAGATTCTCCGGGGGAGGGGGAGGGGATCAGGGGAGAAGAGCCCA 1739
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AAGAAATGGCAGCAAAACCCTCTTCTTTTTTTTTTCCGGAGGAGATACATTGATACTACT 1799
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CCACTTCGATAGTAGTAGTCGTCGTCGTCTAGTAGATGCATAGAACTACTACTAGTATAG 1859
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GAGTGTAGTGGCAGTGCTGGTGCAGTGTGAGGGAAGTCGTAATAGGACGGCTCCAAGAAA 1919
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GCAGCATGTGTGGATGTGGATTCCACGATTGCAGCATTGCTCGCGGATGGAATGTACTAT 1979
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      GTTGGGATTGTCAATGGATGAGTACCACTTAGTAAAAAAAAGGATACACACTGCACCGCA 2039
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      CACATATCGCTGCACACAAGTATATAGTACAGTATATATTTGTTGGCAAGGAATGGATGG 2099
consensus_9323#1      ------------------------------------------------------------
consensus_9323#2      ------------------------------------------------------------
                                                                                  

consensus_9323#0      AACCGA 2105
consensus_9323#1      ------
consensus_9323#2      ------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)