These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9329#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 992 fasta sequence [TCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAGCAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT---------GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTTAATGATGATAGATAGCCCCTGTCC] [+] EMBL AK060604 [TCACTCAGCCAGCATGATGATGAGATTGAGGTTGATATAGATAGCTTTGATGTTGAGACATTATGGGAGCTCGATAGGTTTGTTACAAACTACAAAAAAAGTATAAGCAAGAACAAGCGGAAGGCTGAGAATCCCGTGGCAGGGCAGGATGAGATGAATCATGATATAGAGCTAGAGAAGACAGAGCATGCAAGGTTGGATGAAGTAGAGCAGGATCAGATGCCTCCAGTACAAGAGACGTTACATAATCCTGAGCCAGAATCAATTGATATCGAACCACCTAAAGAAAACACAGCAGATGATAATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGTGCATATGCAGATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAGCATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTT TAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGAGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCT ] [+] EMBL CB000494 [ TAATGAGAGGTATGTAGGCTCATCATCACCTCTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCAC ] [+] EMBL CA999052 [ ATGAGAGGTATGTAGGCTCATCATCACCTGTTCATTTGGAAGATCAGAAGGGGGAGAATGCGGGTAGATCAAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATG ] [-] EMBL CB637460 [ AAGTAGTTCTGGAAGTTCTAGTAGCGATTCAGGCTCTTCGTCTAGT GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTTAATGATGATAGATAGCCCCTGTCC] [-] EMBL CB640214 [ CAGGCTCTTCGTCTAGT GATACAGACACAGATAGTTCATCAGCAGATGGCTCTGATGCTGCACAGTCACCCAGAACGTAACATCTATAGGCCAGATCTTGATGTCAAGCTGGAAAGTTCACCGACAATTCTGGCATGATATCGTCAGCGAGATTCAATGCTGTCTTGTAAATTTTGGCTATGTAGGAAGTCTAACCAAACCAATGCTTTTGTGTCCATCTCGCTGTCTGTTTTAGACTCATAGTGGGTGCCATAAAATGCACATGCATTTCATGCGTCTGTACCATTGTTTGCAGTTATGTACTTATTGTAGAGTGCTGCGTTTACCCTAATCATTGAGCTGGAAATTATCTAACATTGGATAGAAGAAACCTGCACATTGGGGGAAGCAAGACAACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTATTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTCAGCTGTGTTGGATTACCACGGATAAAATGATCTTGCTCTGCTTGTTGTAAGATTTCTGCACAGTCACGTTTGCTCTGGAACTTTGTCTT ] [-] EMBL AF521985 [ ACCGGTGAAGACCAGACCAGGAACCTGGAGGCCCCACCCTGTTGTAATATTGTAAAATTGCTATAGTAGTTGGGTAATTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||