These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2837 fasta sequence [CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGA-TTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAGTTTTGTTGT] [+] EMBL AK102059 [CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGA TTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAG ] [+] EMBL AK103100 [ CTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGATTTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAAT ] [+] EMBL AK105655 [ AACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATGCCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAGTTTTGTTGT] consensusID : consensus_9343#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence [CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGGCGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCCAGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGCGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGCTAAAAGCCGGACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATGATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGGAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAGAAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGGGTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTGATTCTGTTTAGTGCAAAGTTCAGTAAATTTTTCAGACATGGATGTGATGGCAAAGTTCAAGTGGTTTTGTTTAGTGCAAAGTTTAGTAAATATTTCAGCAAATATCATCTCCCAAAAAATGTTCAA] [+] EMBL AK107487 [CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGGCGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCCAGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGCGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGCTAAAAGCCGGACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATGATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGGAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAGAAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGGGTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTGATTCTGTTTAGTGCAAAGTTCAGTAAATTTTTCAGACATGGATGTGATGGCAAAGTTCAAGTGGTTTTGTTTAGTGCAAAGTTTAGTAAATATTTCAGCAAATATCATCTCCCAAAAAATGTTCAA] consensusID : consensus_9343#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence [ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGCATCTTCTTTGGA] [-] EMBL CB630594 [ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGCATCTTCTTT ] [+] EMBL CB630593 [ ATGTCCCTTAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCCGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAAGATTATTTTTATGTTTTGACTTTGTTACGTTAGCAAGTGTTGACAGCATCTTCTTTGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9343#0 CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGA 60 consensus_9343#2 -----------------------ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGG 37 consensus_9343#1 ----------CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGG 50 **************** *********** ***** * consensus_9343#0 CGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCC 120 consensus_9343#2 CAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCC 97 consensus_9343#1 CGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCC 110 * ******************** ******************************** **** consensus_9343#0 GGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGG 180 consensus_9343#2 AGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGG 157 consensus_9343#1 AGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGG 170 *** ******* ******** * ********************* ************** consensus_9343#0 TGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGC 240 consensus_9343#2 CGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGC 217 consensus_9343#1 CGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGC 230 ************* *** *** ** ***************** **** * * * *** consensus_9343#0 TAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGT 300 consensus_9343#2 TAAAAGCCAG----ACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGT 273 consensus_9343#1 TAAAAGCCGG----ACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGT 286 ******** * *** ********************* ******************* consensus_9343#0 CCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACG 360 consensus_9343#2 CCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACG 333 consensus_9343#1 CCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACG 346 ******** ** *********************** ************************ consensus_9343#0 CACCC-GCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGG 419 consensus_9343#2 CACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAG------------------------ 369 consensus_9343#1 CACCC-GCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATG 405 ***** ********* ************ *** ** consensus_9343#0 ATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCG 479 consensus_9343#2 ---CGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCG 426 consensus_9343#1 ATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCG 465 ******** *** *************************** *************** consensus_9343#0 TCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGT-ATGTGTTTTGCCGCTGATT 538 consensus_9343#2 TTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGT-ATGTGTTTTGCCGCTGATT 485 consensus_9343#1 TCGAGATCCAAAAAAGCAAGG-GAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAG 524 * ******************* ** * *** ** ** **** **** consensus_9343#0 TGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTT----AATGTATTA 594 consensus_9343#2 TGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTT----AATGTATTA 541 consensus_9343#1 AAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGG 584 * * ** ** * * * ** ** * * * ***** **** * consensus_9343#0 ATGCT-CCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGATTTTTTTT- 652 consensus_9343#2 ATATT-CCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTG 600 consensus_9343#1 GTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTG 644 * * *** * ** * * ** ** ** * * *** * *** * consensus_9343#0 -TTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACA 711 consensus_9343#2 -TTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCA 659 consensus_9343#1 ATTCTGTTTA------GTGCAAAGTTCAGTAAATTTTTCAGACATGGA--TGTGATGGCA 696 ** * ** * * ** * * **** * ******* ** consensus_9343#0 GTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGC 771 consensus_9343#2 GTTCTGTTTT-AGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGC 718 consensus_9343#1 A---AGTTCAAGTGGTTTTGTTTA-GTGCAAAGTTTAGTAAATATTTCAGCA--AATATC 750 *** * ** * ** * * * *** ** * * * * consensus_9343#0 ATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCA 831 consensus_9343#2 ATCTTCTTTGGA------------------------------------------------ 730 consensus_9343#1 ATCTCCCAAAAAATGTTCAA---------------------------------------- 770 **** * * consensus_9343#0 TTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCA 891 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 CCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAAC 951 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCA 1011 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 CTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAA 1071 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACT 1131 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 CTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTT 1191 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCC 1251 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAAC 1311 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGC 1371 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 ATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGT 1431 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTA 1491 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGA 1551 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGAT 1611 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCA 1671 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCT 1731 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 ATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGT 1791 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCAT 1851 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGT 1911 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAAC 1971 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTT 2031 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAG 2091 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCA 2151 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATC 2211 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGT 2271 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGC 2331 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACA 2391 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAA 2451 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAA 2511 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAA 2571 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAG 2631 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 AAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCT 2691 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 GTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTC 2751 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 ACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCA 2811 consensus_9343#2 ------------------------------------------------------------ consensus_9343#1 ------------------------------------------------------------ consensus_9343#0 TACCAAGCAAATGCAAGTTTTGTTGT 2837 consensus_9343#2 -------------------------- consensus_9343#1 -------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||