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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2837 fasta sequence
[CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGA-TTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAGTTTTGTTGT]
[+] EMBL AK102059 [CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGA TTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAG ]
[+] EMBL AK103100 [ CTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGACGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCGGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGTGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGCTAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGGATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGTATGTGTTTTGCCGCTGATTTGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATGCTCCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGATTTTTTTTTTTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACAGTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAAT ]
[+] EMBL AK105655 [ AACTTTGTTAGGTTAGCAATTGTTGACAGCATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCATTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCACCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAACGGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCACTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAAGGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACTCTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTTTGTAGTTTTGTTAGCAACAATGGATGCCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCCAGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAACTAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGCATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGTGGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTAGCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGAGGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGATGGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCATGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCTATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGTGTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCATTTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATCAGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGCAATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACATAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAAAGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAATTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAATCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAGAAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCTGTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTCACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCATACCAAGCAAATGCAAGTTTTGTTGT]
consensusID : consensus_9343#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence
[CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGGCGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCCAGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGCGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGCTAAAAGCCGGACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATGATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGGAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAGAAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGGGTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTGATTCTGTTTAGTGCAAAGTTCAGTAAATTTTTCAGACATGGATGTGATGGCAAAGTTCAAGTGGTTTTGTTTAGTGCAAAGTTTAGTAAATATTTCAGCAAATATCATCTCCCAAAAAATGTTCAA]
[+] EMBL AK107487 [CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGGCGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCCAGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGGCGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGCTAAAAGCCGGACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGTCCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCGCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATGATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCGTCGAGATCCAAAAAAGCAAGGGAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAGAAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGGGTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTGATTCTGTTTAGTGCAAAGTTCAGTAAATTTTTCAGACATGGATGTGATGGCAAAGTTCAAGTGGTTTTGTTTAGTGCAAAGTTTAGTAAATATTTCAGCAAATATCATCTCCCAAAAAATGTTCAA]
consensusID : consensus_9343#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence
[ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGCATCTTCTTTGGA]
[-] EMBL CB630594 [ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGCATCTTCTTT ]
[+] EMBL CB630593 [ ATGTCCCTTAGGCGAGGGGGCGAATCCGGCAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCCGCTGCAGCCAGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGGCGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGCTAAAAGCCAGACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGTCCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACGCACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCGTTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGTATGTGTTTTGCCGCTGATTTGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTTAATGTATTAATATTCCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTGTTTTACATGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGGCAGTTCTGTTTTAAGATTATTTTTATGTTTTGACTTTGTTACGTTAGCAAGTGTTGACAGCATCTTCTTTGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9343#0 CAGTGCTACCCACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGCGAATCCGA 60
consensus_9343#2 -----------------------ACACCTCGATGTCGTCGAGGCGAGGGGGCGAATCCGG 37
consensus_9343#1 ----------CACTCTCAGCGCCACACCTCGATGTCGTCAAGGCGAGGGGGAGAATCAGG 50
**************** *********** ***** *
consensus_9343#0 CGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCC 120
consensus_9343#2 CAGCGGCGATTCTCCTCGCCGGTGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGCAGCC 97
consensus_9343#1 CGGCGGCGATTCTCCTCGCCGGCGGGAGGAGGCCAAGAGCACGACTCCTCGGCTGTAGCC 110
* ******************** ******************************** ****
consensus_9343#0 GGGCGCAGCCGGCGGGCGCAGTGTGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGG 180
consensus_9343#2 AGGCTCAGCCGGCGGGCGCAGCGCGGCGCCCTCCGCTGAGATGTCGTCGAGGGGATGGGG 157
consensus_9343#1 AGGCTCAGCCGGTGGGCGCAGTGCGGCGCCCTCCGCTGAGATGTCATCGAGGGGATGGGG 170
*** ******* ******** * ********************* **************
consensus_9343#0 TGAATCTGGCGGCGACGATTCGCTTCGGCTGCAGGGGGATTCCAGCTCGCGCAAAATGGC 240
consensus_9343#2 CGAATCTGGCGGCGGTGATTCGCCTCAGCTGCAGGGGGATTCCAGCTCGTGCAAAAAGGC 217
consensus_9343#1 CGAATCTGGCGGCGGCGATCCGCCTCGGCTGCAGGGGGATTCCATCTCGCGTAGCAAGGC 230
************* *** *** ** ***************** **** * * * ***
consensus_9343#0 TAAAAGCCGGCCGGACAACATCGCTGCAGCCAGGCTCAGCCAGCGAGCATGTTGCGGCGT 300
consensus_9343#2 TAAAAGCCAG----ACACCATCGCTGCAGCCAGGCTCAGCAAGCGAGCATGTTGCGGCGT 273
consensus_9343#1 TAAAAGCCGG----ACAACATCGCTGCAGCCAGGCTCAGTCAGCGAGCATGTTGCGGCGT 286
******** * *** ********************* *******************
consensus_9343#0 CCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCAGCAAGGTTGACGGCGAGGCGCACG 360
consensus_9343#2 CCTCCGCCACCTCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACG 333
consensus_9343#1 CCTCCGCCGCCGCCGTGGAGACAGGCTTGGAGTTCGGCAAGGTTGACGGCGAGGCGCACG 346
******** ** *********************** ************************
consensus_9343#0 CACCC-GCTCCCCTGTGCTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAAGG 419
consensus_9343#2 CACCCCGCTCCCCTGCGCTTGGCAAGGCAACAAAAG------------------------ 369
consensus_9343#1 CACCC-GCTCCCCTGCACTTGGCAAGGCACCAACAGTTGTTCTGTGTTCATCAAGCAATG 405
***** ********* ************ *** **
consensus_9343#0 ATGCGCTGAATCGCATTGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCG 479
consensus_9343#2 ---CGCTGAATAGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATACAAAAAGGTCAGGCG 426
consensus_9343#1 ATGCGCTGAATCGCAGGGCAGTTGCTGGTGGTCTTGATTTGGATCCAAAAAGGTCAGGCG 465
******** *** *************************** ***************
consensus_9343#0 TCGAGATCCAAAAAAGCAAGGTGATCATGTGTTATTTCGT-ATGTGTTTTGCCGCTGATT 538
consensus_9343#2 TTGAGATCCAAAAAAGCAAGGTGAGCATGTGTTCTTTCGT-ATGTGTTTTGCCGCTGATT 485
consensus_9343#1 TCGAGATCCAAAAAAGCAAGG-GAACGGGTGAAATTGAGTTGCCAATTTTTGGACTGAAG 524
* ******************* ** * *** ** ** **** ****
consensus_9343#0 TGCTGATTCAATCTTATTGCTCTTCTTCTTGATCTGTGTATTTGTTT----AATGTATTA 594
consensus_9343#2 TGTTGATTCAATCTTTTTGCCCTTCTTCTTGATCTGTGTATTTGTTT----AATGTATTA 541
consensus_9343#1 AAGTAGTCTCATTTTGTGGACAATTTTTTTACTGAGAGCCCATGTTTGCAGAATGAAGGG 584
* * ** ** * * * ** ** * * * ***** **** *
consensus_9343#0 ATGCT-CCAAAAAAATAGGTTGGGGGATTAGATCTGTTGGTTGGGAATGGATTTTTTTT- 652
consensus_9343#2 ATATT-CCAAAAAAACAGGTTGGGGGGTTAGATCTGTTGGTTGGGAATGGATTTTTTTTG 600
consensus_9343#1 GTCCTACCAGAGCAATGGCTCCTAGGGCGCCTAATGATGTGTTGTGATGCAGGTTTAGTG 644
* * *** * ** * * ** ** ** * * *** * *** *
consensus_9343#0 -TTCTACACGAAGGCTGTCTGGATGTTGGTTGACACTGGGGACAAGATCTTGTGATGACA 711
consensus_9343#2 -TTTTACATGAAGGCTGTCTGGATGTGGGTTGACACTGGGGACAAGATCTTGTGATGGCA 659
consensus_9343#1 ATTCTGTTTA------GTGCAAAGTTCAGTAAATTTTTCAGACATGGA--TGTGATGGCA 696
** * ** * * ** * * **** * ******* **
consensus_9343#0 GTTCTGTTTTTAGGATTATTTTCATGATTTAACTTTGTTAGGTTAGCAATTGTTGACAGC 771
consensus_9343#2 GTTCTGTTTT-AGGATTATTTTTATGTTTTGACTTTGTTAAAAGAGCAAGTGTTGACAGC 718
consensus_9343#1 A---AGTTCAAGTGGTTTTGTTTA-GTGCAAAGTTTAGTAAATATTTCAGCA--AATATC 750
*** * ** * ** * * * *** ** * * * *
consensus_9343#0 ATCTTCTTTGGAGTGTCAGTATTTTCTACGTAGCTCAGTTCTTAATTACGTATAAATGCA 831
consensus_9343#2 ATCTTCTTTGGA------------------------------------------------ 730
consensus_9343#1 ATCTCCCAAAAAATGTTCAA---------------------------------------- 770
**** * *
consensus_9343#0 TTTCAGTATTAATTTCGTTTCTTATTGCAGTCCTCAAAATTTTCAGTGGGTATTTAAGCA 891
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 CCAATACCAGGGGTTTTAGAGCAACAACATTTTTAGATCAGATTGGAGTTACAATTTAAC 951
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GGGAGTTCCATGAATGGAAATAGTTTTGTATGCAAGAATCTAATTAGTAGTAATACTGCA 1011
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 CTGTCTTTTCGGTTACATCTGTATTTAAAATTTTCAAAAAGAACACTTTATGGCTATAAA 1071
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GGAAACTAAAATAAATCCTTATCTACTAAGCATGTTATGTAATAATTGATTTTATCAACT 1131
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 CTTGCTAGGAAAGGATGTTCTGTTTTGCGGTAGTATAGGTTATGCTAATTTAATTTCCTT 1191
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TGTAGTTTTGTTAGCAACAATGGATACCTGCTCCTTGTCTTTCTGATCTTTTTCTTTTCC 1251
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AGGGACTCTTGTCCAAATTTTTTTAACTCTCCTCTTTTGGATTTTGTGGAGCATGAGAAC 1311
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TAGAATTAAGATCCAGATTTTCTTTTCTGCTCAACCTGAATACATTTGTTCCTGATTTGC 1371
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 ATCCTCTTCCCACAACCATTTTGCGGAGGACTTTTTCTTTGTATTGTTCAGGGGGGATGT 1431
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GGGTTACATGCAGGTACAAATTTGTATAAAGAGTTTATTAGTTTAGTTTTATCTTTACTA 1491
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GCTGGAATATATTGAAATGAAATCTGCCTAGTTCTGAATTTGGCCTAGTGTAGTTGTAGA 1551
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GGGTAATTCCGATGAGGAATTGGGTATGCCCCACAAGGAGGTTGGTATTGTCCTGACGAT 1611
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GGCATGTAGCCTTGTGGAGGGCACTGTTGGTTAGGAGGATACCCATTGTTGCTCTCACCA 1671
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TGCATGTCCTTGCTTGCAAAGTAATATATTAATTTTGTCAGCCATTAGTTAGATAAAGCT 1731
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 ATATAGTTTTAACTAAATTTGGTAAAACTACAATATTTCTGTTGGGTGATCTACTAGTGT 1791
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GTTGGGTGATCACTAGTGTGCATTAGTTCTGTTATAGTTAGGTAAAAGGTATGATTGCAT 1851
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TTAACAAACATAGTTTTGTAAGAAAAGAGATTAGTTTTGTTTGCTATTAGAATTTATAGT 1911
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCAGAAATACAAC 1971
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AATTAGAAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAGTCATAAATACTT 2031
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGTTTGCCATTAG 2091
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AATTCCTAGTTTTGTTAGTTCAGTCAGAAATACTTTAACCTCTACTTTCAAGTTCTGTCA 2151
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GAAATACAACAATTAGTAGTTTTGTTAGCCATTAGAATTCCTAGTTTTGCTAGTTCAATC 2211
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AGAAATACTTTAACCTCTACTTTCAAGTTTTGTCAGAAATATTGCAATTAGTAGTTTTGT 2271
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TTGCCATTAGAATTCCTAGTTTTGTTAGTTCAAAATGGGTATTAGTTCTGCTTTGTCAGC 2331
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AATTAGTTTTGCGGAGTTCTTCTGCTTGCTTCTTCTATCTATCTTGTTGGACTACATACA 2391
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TAGTTAGTTAGCTGAAATGACATTTGGTTAGCTTTGTCTTGATCCCTTCTTTGCTAGAAA 2451
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AGACATGTTTCTACAAATCTATAGTGATTTATGTATGCACACTATAGGTCTGTTCTGTAA 2511
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TTTTAATATTCTCACTGATATACTGACAGCTAGAACCTTTCCTTTTTTTCCAGCAAATAA 2571
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TCAATCCGCAATGGGGGGCAGGGTGATCAATGATGTGTTCAGCTTTTTGACTAGTGACAG 2631
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 AAGTACATATATATGTATTCAGATATAGGTCCTACAACATGCTAACAATTTTAGATATCT 2691
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 GTGCACTTAGTTTTGTTAAAAGCTCAGATAGCAGAGGCACAGATCTCACATTCAGATGTC 2751
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 ACTATGTTTAATTACTGCTCTTACTCTAGTCAAGATGCAGGGGCAAGATTAAATGTTTCA 2811
consensus_9343#2 ------------------------------------------------------------
consensus_9343#1 ------------------------------------------------------------
consensus_9343#0 TACCAAGCAAATGCAAGTTTTGTTGT 2837
consensus_9343#2 --------------------------
consensus_9343#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||