These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9345#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 761 fasta sequence [GTCTCTTTTAGGCCTTCACAGTAAAGCTTGGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT-C-AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA-TGGC--AGG-AATGCCTGGAAC-TG-CTAC-TTCCAGAACTCA-GCT-CTCGT-CGTGCAGTCT-GACCCAAGTTAT-GGTTCCTGCACGTACTAC-TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGATTTGTCAAAAAAAAAAAAAAAA] [+] EMBL AK102517 [GTCTCTTTTAGGCCTTCACAGTAAAGCTTGGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT C AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC AGG AATGCCTGGAAC TG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTT ] [+] EMBL OS1321624 [ GGTACTGGTGCTGGTGCCTGCTCCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAA NGTNC AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC AGGAAATGCCTGGAAC TG CTACTTTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTATGGGTTCCTGCACGTACTACTTGATTTTAAAACTGAGGTCGAGNTCGAGGCAGGGCCTACGNAGCTGAG ] [+] EMBL AK059681 [ CCAGAGCAAGATGGCAAGAGGGGCTCAGCCATCTGCATCCCTCCTGCTCTTCTCCCTGGGGCTTGTGCTCCTCTACTTCTCCTCAGGAAGCACCATTCGACTTGCTGAGGGACAGAAAACTTGGTGCGTGGCGAAGCCGT C AGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC AGG AATGCCTGGAAC TG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGA ] [+] EMBL AU029844 [ CAGAAAACTTGGTGCGTGGCGAA CGT CNAGCAGATGACAAGGTTCTTACGGCGAATCTCAACTACGCCTGCTCTCAGGTGAACTGTGGAGTGATTCAGCAAGGTGGCCCGTGCTTCAACCCCAACAACCTGGTGTCGCACGCCGCAGTCGCCATGAACCTCTACTATGCTGCCCA TGGC AGG AATGCCTGGAACTTG CTAC TTCCAGAACTCA GCT CTCGT CGTGCAGTCTGGACCCAAGTTAT GGTTCCTGCACGTACNAC TGATTTTAAAACTGAGGTCGAGGTCGANGCAGGGCCTACGCA CTGAGTTTGTATTAGa ] [+] EMBL AU077690 [ TGAACCTCTACTATGCTGCCCA TGGC AGG AATGCCTGGAAC TG CTACTTTCCNGAACTCA GCT CTCGT CGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGAGGCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCNGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAATATATGATTTGTCAAAAAAAAAAAAAAAA] [+] EMBL AU161777 [ tctacCTACT NGCTGCCCATTGGCCAAGG AATGCCTGGAAC TGCCTAC TTCCAGAACTCAGGCTNCTCGTCCGTGCAGTCT GACCCAAGTTAT GGTTCCTGCACGTACTAC TGATTTTAAAACTGAGGTCGAGGTCGA GCAGGGCCTACGCAGCTGAGTTTGTATTAGGATGTCTTTTACTCCCATGTTAGCAGTGCCGAGATTTCGTGGCGATGCCCTAGATCCTCTGATGCTTAGTTTATTGATAAGATGAACATTGATTTGCTCGGATCTTGGATGCTGTTTGTGGCGTCCATTCCCATCAACCTTCATTGGATGTTTGGAAATTCAGACTTGTTGATCCACATGCTTCATTGCTTCCTGTTTCCTAGCATCTCTTGTTTTCAGTTTGATGGAAACCGGGGATTCGTTGAATGAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||