These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9353#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1430 fasta sequence [CACAAATTCGATTCACCCCCCAATCGCTGGCGCCTTTGACTCCCGCCGCGGGCGGCGCAGCGCAGCCGATGGGGATCCCCGCCGCCTCAGTCGCGGCCCGGACAGCCGTCGGCGCGGCGCTGGCCGCCGTCATCGCCGCGCGCGCCGTCCGCCGCCGCTCGCTGGACGGCTCCGGCGGGGCAGCCGGGTTCGTCGTCATGGCGATCCACCTCGCCTGCGGGTACAGGTACGGCGCGCTCGTGCTGGCCTTCTTCTTCACCTCGTCCAAGGCGACCAAGATCGGCGCGGACAGGAAGCGCCGCATCGAGGACGACTTCAAGGAGGGCGGCCAGCGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT-GGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGCTTGGCAGTCTGATTGATTCAGTG-TTGGGTGCC-ACACT-CCA-GTT-CAGTGGATACTGCAGTGTT-CGGAAGAAGG-TGGTCAGTAAACGGGG-CCCTACAGT-CACCAAGATTTCTGGAATGACTAT-CCTGGATAATGATGCGGTTAATGC-TGTATCTGT-GCTACT-AACA-ACTGCGGTT-ACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTT-TTT-ACTCAAGTT-TCTT-CCAAACACCCAATTCCATTCA-AAGGTGTCAAGGCATGGCCCCAAGA-CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT-ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT-CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAAAA] [+] EMBL AK099867 [CACAAATTCGATTCACCCCCCAATCGCTGGCGCCTTTGACTCCCGCCGCGGGCGGCGCAGCGCAGCCGATGGGGATCCCCGCCGCCTCAGTCGCGGCCCGGACAGCCGTCGGCGCGGCGCTGGCCGCCGTCATCGCCGCGCGCGCCGTCCGCCGCCGCTCGCTGGACGGCTCCGGCGGGGCAGCCGGGTTCGTCGTCATGGCGATCCACCTCGCCTGCGGGTACAGGTACGGCGCGCTCGTGCTGGCCTTCTTCTTCACCTCGTCCAAGGCGACCAAGATCGGCGCGGACAGGAAGCGCCGCATCGAGGACGACTTCAAGGAGGGCGGCCAGCGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT GGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGCTTGGCAGTCTGATTGATTCAGTG TTGGGTGCC ACACT CCA GTT CAGTGGATACTGCAGTGTT CGGAAGAAGG TGGTCAGTAAACGGGG CCCTACAGT CACCAAGATTTCTGGAATGACTAT CCTGGATAATGATGCGGTTAATGC TGTATCTGT GCTACT AACA ACTGCGGTT ACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTT TTT ACTCAAGTT TCTT CCAAACACCCAATTCCATTCA AAGGTGTCAAGGCATGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCA ] [+] EMBL AU065683 [ CGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT GGAGTGACCTTACAA GCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGAC TTG TTTTGTTGGACTGTTGACTGTGGAGTGCTCA TTGACGTGGCTCTTCGACAGCTTCTAGTAAT ] [+] EMBL CF310334 [ ATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGTNGGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGTTTGGCAGTCTGATTGATTCAGTGTTTGGGTGCC ACACT CCAGGTT CAGTGGATACTGCAGTGTT CGGAAGAAGG TGGTCAGTAAACGGGG CCCTACAGT CACCAAGATTTCTGGAATGA ] [+] EMBL AU030377 [ TGTCANTCTGA TGATCCNGTG TTGGGTCCCNANACTCCCA GTTCCAGTGGATACTGCAGTGTTCCGGAAGAAGGTTGNCCCNTAAACGGGGCCCCTACAGTCCCCCAAGATTTCNGGAATGANTATCCCTGGATAATGATGCGGTTAATGC TGTACCTGT GCTACT AACA ACTGCGGTT ACAGCTTATGCGTGCATTCGCNTCTTTTGAAGATCTT TTT ACTCAAGTT TCTT CCAACCACCCAATTCCATTCA AAGGTGTCAAGGCNTGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAA ] [+] EMBL BI805775 [ CAGT CACCAAGAGTTCTGGAATGACTAT CCT GATAAT ATGCGGTTAATGCGTGTATCTGTGGCTACTGAACATACGGCGGTTGACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTTGTTTGACTCAAGTTGTCTTCCCANACACCCCATTCCATTCACAAGGTGTCAAGGCATGGCCCCCAGACCCATGAAATGATGGATTAGGCNTTTTGGCTGCTTGATGAGNAAGATTC ATTCACTC ACGTTGTTCACTACTCCCAGAAAAACCTTGTTTGGTTGGTTGGTGCTACCNCNAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTTGACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGAT GCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACCAAGCTGTTTGGGACCAAGGAAAGCTGCTGCTGATTTCCCTTNGGAAATGGTCCAATCCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTG ] [-] EMBL CF310335 [ TCAAGGCATGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||