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Oryza sativa
cluster # 9365 cluster # 9365       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9365#0 length = 2626 sequences # 5  
consensus_9365#1 length = 306 sequences # 1  

consensusID : consensus_9365#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2626
fasta sequence
                              [CGTCTTCTCGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAGAGAGGAGAACACCTGAAACCCTAACCCTAGCGAGGCAAGAGGGGAGGGGATGGCGAAGAAGCTCGGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAACGGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCTGACAGTGAGGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGACCCTGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATATAAAGCACATT-GATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCT-ATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCTTCAGGCAG-AGAAGANCGGTGCAAAAATTTCA-CAGTTTTACAAAATTGTACCAAAAAAACTAAGG-TAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTAT-CGGAAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAG-CCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGAAAGGATTTTGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTAGCATTTCACTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATTTGAAGGGACTGGCTGTAATCCCTACTAAAACACAAATTTTCATGTAAAAAAAAA]

[+] EMBL AK070504             [CGTCTTCTCGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAGAGAGGAGAACACCTGAAACCCTAACCCTAGCGAGGCAAGAGGGGAGGGGATGGCGAAGAAGCTCGGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAACGGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCTGACAGTGAGGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGACCCTGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATATAAAGCACATT GATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCT ATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCTTCAGGCAG AGAAGAGCGGTGCAAAAATTTCA CAGTTTTACAAAATTGTACCAAAAAAACTAAGG TAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTAT CGGAAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAG CCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGAAAGGATTTTGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTAGCATTTCACTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATTTGAAGGGACTGGCTGT                                      ]
[-] EMBL AK101255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATATAAAGCACATT GATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCT ATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU030971             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTNGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATATAAAGCACATTGGATTTTTTAATGGACTGTCTAGTGGAGCTCTATTCTCTNGATGTTCAGAAATCATGTGAGAGGGCCACTACCTCTATAGGACAACTGAATTCTAANTCTCAGGCAGGCTTGTAAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU055700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAGAGACGGGGNCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCTTCAGGCAGAAGAAGANCGGGGCCAAAATTTCACCAGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU055701             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gCCTATTTAACGACT NTTGNCCAGGTAGNCG GGAC AGGACATTGTAG AAGGAAGAGAG CCGGGTCTCATTTTCCCCCTATGATACAACATCAGTTGAGAGCTCCGTTCAGGACCTTCAGGCAG AGAAGANCGGTGCAAAAATTTCA CAGTTTTACAAAA TGTACCAAAAAAACTAAGGNTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTATCCGGAAGAAGGATGCTGGGAGC TGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGAAAGGATTTTGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTAGCATTTCACTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATTTGAAGGGACTGGCTGTAATCCCTACTAAAACACAAATTTTCATGTAAAAAAAAA]


>consensus_9365#0 CGTCTTCTCGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAGAGAGGAGAACAC CTGAAACCCTAACCCTAGCGAGGCAAGAGGGGAGGGGATGGCGAAGAAGCTCGGGAAGAA GGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCG CTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGG CGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAACGGTGATGC TGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCT GTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCTGACAGTGA GGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAA GATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGACCC TGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGA GGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAA TCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGC AAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCG ATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCA GATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTC GGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTAT TGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGA CAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGC ATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGA TCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGA ATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGT GAATGAAGGAAATATAAAGCACATTGATTTTTTAATGGACTGTCTAGTGGAGCTCTATTC TCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCTAT TCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCA ATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAA TATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCC AGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAG TTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGA TACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGT GCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGA TGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCAC CATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCG TCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAG AGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCT TCAGGCAGAGAAGANCGGTGCAAAAATTTCACAGTTTTACAAAATTGTACCAAAAAAACT AAGGTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTATCGG AAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGG GAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAG TTGTTGAAACCGGTGAAGTGAATGAGCCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTT ACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATG TTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGAAAGGATTT TGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTAGCATTTCA CTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATTTGAAGGGA CTGGCTGTAATCCCTACTAAAACACAAATTTTCATGTAAAAAAAAA



consensusID : consensus_9365#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 306
fasta sequence
                              [ATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTNTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGNGGTTGAGNCTGTTCTTCCTGACGAAAGGATTTTGTGATCTNNTTTTGNNCAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU165911             [ATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTNTTGCTGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGNGGTTGAGNCTGTTCTTCCTGACGAAAGGATTTTGTGATCTNNTTTTGNNCAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9365#1 ATATCGGTCAACTCATTTTTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTA TGACATCAACAATGGCATTGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTNTTGC TGAGCAAAGTTTTGAGCGTGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTT GCTTAGCAAAGTTTTGAGCGTGAATGTTACTATTTGTTGATGCATTACTGTGGNGGTTGA GNCTGTTCTTCCTGACGAAAGGATTTTGTGATCTNNTTTTGNNCAAAAAAAAAAAAAAAA AAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9365#0      CGTCTTCTCGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAGAGAGGAGAACAC 60
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CTGAAACCCTAACCCTAGCGAGGCAAGAGGGGAGGGGATGGCGAAGAAGCTCGGGAAGAA 120
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGCAAGCAGCG 180
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAGCGCGATGG 240
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAACGGTGATGC 300
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAACAGTGATCT 360
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCTGACAGTGA 420
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAGAATGATAA 480
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGACAAGGACCC 540
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGAAGTAAAGA 600
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGTGATGAAAA 660
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAGTTAGTTGC 720
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      AAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGATGCTTGTCG 780
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      ATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTGTTTCATCA 840
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTAGAAATTTC 900
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGGAAAACTAT 960
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAACTTACTGA 1020
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTTTTTTCTGC 1080
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      ATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCCAGTGGAGA 1140
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTGTTACCAGA 1200
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      ATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCCAAGCTTGT 1260
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GAATGAAGGAAATATAAAGCACATTGATTTTTTAATGGACTGTCTAGTGGAGCTCTATTC 1320
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTGAATTCTAT 1380
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGATAACTGGCA 1440
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      ATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAGGACTACAA 1500
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCACTTATTCCC 1560
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      AGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAGCTTTCTAG 1620
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAATTTAGAGA 1680
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTATTGAAGGT 1740
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      GCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCAGCTATTGA 1800
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAAGTAGCCAC 1860
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCACTTCGTCG 1920
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAAAGGAAGAG 1980
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      AGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTTCAGGACCT 2040
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      TCAGGCAGAGAAGANCGGTGCAAAAATTTCACAGTTTTACAAAATTGTACCAAAAAAACT 2100
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      AAGGTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGGATTATCGG 2160
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      AAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTTTTCTCTGG 2220
consensus_9365#1      ----------------------------------ATATCGGTCAACTCATTTTTCTCTGG 26
                                                        **************************

consensus_9365#0      GAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAG 2280
consensus_9365#1      GAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCATTGCTCGAG 86
                      ************************************************************

consensus_9365#0      TTGTTGAAACCGGTGAAGTGAATGAGCCTCTTGCTGAGCAAAGTTTTGAGCGTGAATGTT 2340
consensus_9365#1      TTGTTGAAACCGGTGAAGTGAATGAGCCTNTTGCTGAGCAAAGTTTTGAGCGTGAATGTT 146
                      ***************************** ******************************

consensus_9365#0      ACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATG 2400
consensus_9365#1      ACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAGCGTGAATG 206
                      ************************************************************

consensus_9365#0      TTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGAAAGGATTT 2460
consensus_9365#1      TTACTATTTGTTGATGCATTACTGTGGNGGTTGAGNCTGTTCTTCCTGACGAAAGGATTT 266
                      *************************** ******* ************************

consensus_9365#0      TGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTAGCATTTCA 2520
consensus_9365#1      TGTGATCTNNTTTTGNNCAAAAAAAAAAAAAAAAAAAAAA-------------------- 306
                      ********  *****  **  *   *  *      * * *                    

consensus_9365#0      CTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATTTGAAGGGA 2580
consensus_9365#1      ------------------------------------------------------------
                                                                                  

consensus_9365#0      CTGGCTGTAATCCCTACTAAAACACAAATTTTCATGTAAAAAAAAA 2626
consensus_9365#1      ----------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)