These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2785 fasta sequence [ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTCCATCGAACTTCTGTTGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTTTCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTTTACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACCACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTCTTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGACATGGTAAATAGTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACATCGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTACCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAAGAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTGTTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCATGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCTAATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCAC] [+] EMBL AK064997 [ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTCCATCGAACTTCTGTTGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTTTCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTTTACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACCACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTCTTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGACATGGTAAATAGTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACATCGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTACCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAAGAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTGTTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCATGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCTAATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCAC] consensusID : consensus_9390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1606 fasta sequence [TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCATAGACCTTCCAA-GAAACATGAAATTTTGCTA] [+] EMBL AK102773 [TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCATAGACCTTCCAA GAAACATGAAATTTTGCT ] [+] EMBL OSS12715A [ AAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTNCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGNTTCAGTATGCTGGGCTNTGGGCGACATCCTTGAGGCCTTTNATAGCTA ] [+] EMBL AU032640 [ GTTTCCCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATCCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTCCCTTAANTAAGAGAAAAAATGGTGTTCA ACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTNCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATNCCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCAaaaaaaa ] [-] EMBL CB678420 [ AGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACGGAGAGTATGTCATCCTCTGTTGGTAGTTGTAGTCCAACCAGTAGTCCTTGTAGTTCACGACAATTTTTCTCAGCATACCAAAATGGTGATATCTGTAGTAGAAATGATGGTGATGAAGCTGCCGTATATGAAAGAGAAACATCTCATCATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTATCTGGGAGCAGGAGGCTTTGTTGTCTAATCTAAGGCTTGCACTGAACATATCATCTGATGAACATATAGCTGAGTCGAGGAGTATGGTTTCCTCGGTTATTACTTTTAGATAGCAGTTGTAGTTACTTGCTGGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCTTTAAGTATGAGGTATTGGAGTAGTGGATGTTCTGTATTACCTGTTAAAAGAGTTACTTAGTCAGATCATTTTTGTGCCATAGACTTTCCAATGAAACATGAAATTTTGCTA] consensusID : consensus_9390#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence [GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC] [+] EMBL CF196597 [GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9390#1 -TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAG 59 consensus_9390#2 --------------------GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAG 40 consensus_9390#0 ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAG 60 ********** ***************************** consensus_9390#1 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGC 119 consensus_9390#2 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGC 100 consensus_9390#0 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGC 120 ******************************************************* **** consensus_9390#1 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 179 consensus_9390#2 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 160 consensus_9390#0 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 180 ************************************************************ consensus_9390#1 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 239 consensus_9390#2 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 220 consensus_9390#0 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 240 ************************************************************ consensus_9390#1 GAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 299 consensus_9390#2 GAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 280 consensus_9390#0 GAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 300 ************** ********************************************* consensus_9390#1 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCT 359 consensus_9390#2 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCT 340 consensus_9390#0 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCT 360 ***************************************** ****************** consensus_9390#1 GTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGC 419 consensus_9390#2 GTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGC 400 consensus_9390#0 GTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGC 420 ****** ****** ********************** *********** consensus_9390#1 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATG 479 consensus_9390#2 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC------- 453 consensus_9390#0 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATG 480 **************************************** ** consensus_9390#1 GTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTG 539 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTG 540 consensus_9390#1 AGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTT 599 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 AGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTT 600 consensus_9390#1 CTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGA 659 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGA 660 consensus_9390#1 AATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTT 719 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 AATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTT 720 consensus_9390#1 CTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCA 779 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCA 780 consensus_9390#1 TCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAG 839 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAG 840 consensus_9390#1 ACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCT 899 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCT 900 consensus_9390#1 GAAAAGG--------TAGATGCTGTTGAT---TCCCCATGC---TTAATGCTGGGTGAAA 945 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGG 960 consensus_9390#1 AATACAT-GCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCT 1004 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 AGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTC---CATCGAACTTCTGT 1017 consensus_9390#1 GGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGAC 1064 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTT 1077 consensus_9390#1 ACCGAGAGTATCTCATCC--TCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTT 1122 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTT 1137 consensus_9390#1 CACGACACTTTTACTCAGCCTAC-CAAAC-----TGGTG---ATATCTGTAG----TAGA 1169 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACC 1197 consensus_9390#1 ACTGATGGTGCTGAAGCTGCCGTATCTGAA-AGAGAAACATCTCAACATGAT-------- 1220 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTC 1257 consensus_9390#1 ---AAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACA 1277 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGAC-ATGGTA-AATA 1315 consensus_9390#1 ATGTTGGCA-TTG-------TATGTTTGTGGGTCAATTAGCTGGGAGCAGG---AGGCTT 1326 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACAT 1375 consensus_9390#1 TGTTGACTAATCTAAGGCTTACACTGAACATATCAACTG-ATGAACATCTAGCTGAGTTG 1385 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTA 1435 consensus_9390#1 --AGGAGTATGGTTTCCTC--GGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTG 1441 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAA 1495 consensus_9390#1 GTGAC----TTTTATGACATCTTTGTTGTCT-TGAAATCATTGTAAGTTGGGAAATCCCA 1496 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTG 1555 consensus_9390#1 TTAAGTA-TGAGGTATTTGAGTAGTTGAT---GTTCTGT--------ATTACCTGTTAAA 1544 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCA 1615 consensus_9390#1 AGAGTTACC-TAGTCAGATCATTT--TTGTACCATAGACCTTCCAAGA-----AACATGA 1596 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCT 1675 consensus_9390#1 AATTTTGCTA-------------------------------------------------- 1606 consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 AATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTG 1735 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGAT 1795 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAA 1855 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTG 1915 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGC 1975 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACC 2035 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACT 2095 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATT 2155 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGT 2215 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTG 2275 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 TTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACAC 2335 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGC 2395 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTA 2455 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCT 2515 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTAT 2575 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 ATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAA 2635 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 GCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATG 2695 consensus_9390#1 ------------------------------------------------------------ consensus_9390#2 ------------------------------------------------------------ consensus_9390#0 CATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATAC 2755 consensus_9390#1 ------------------------------ consensus_9390#2 ------------------------------ consensus_9390#0 AGACAAATGTCTGTTCAAATAAAGAGTCAC 2785 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||