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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2785 fasta sequence
[ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTCCATCGAACTTCTGTTGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTTTCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTTTACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACCACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTCTTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGACATGGTAAATAGTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACATCGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTACCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAAGAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTGTTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCATGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCTAATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCAC]
[+] EMBL AK064997 [ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGGAGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTCCATCGAACTTCTGTTGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTTTCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTTTACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACCACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTCTTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGACATGGTAAATAGTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACATCGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTACCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAAGAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTGTTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCATGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCTAATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTGCTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGATGCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAAGTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTGTCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGCTAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACCTTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACTCGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATTCAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGTGTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTGTTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACACGCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGCATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTAATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCTACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTATATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAAGCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATGCATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATACAGACAAATGTCTGTTCAAATAAAGAGTCAC]
consensusID : consensus_9390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1606 fasta sequence
[TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCATAGACCTTCCAA-GAAACATGAAATTTTGCTA]
[+] EMBL AK102773 [TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATGGTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTGAGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTTCTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGAAATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTTCTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCATCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAGACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATTCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTGCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCATAGACCTTCCAA GAAACATGAAATTTTGCT ]
[+] EMBL OSS12715A [ AAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCTGTCGAGAGGGTNCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGNTTCAGTATGCTGGGCTNTGGGCGACATCCTTGAGGCCTTTNATAGCTA ]
[+] EMBL AU032640 [ GTTTCCCCTCGTTTGGCTGAAAAGGTAGATGCTGTTGATCCCCCATGCTTAATGCTGGGTGAAAAATACATGCATGCTCCCTTAANTAAGAGAAAAAATGGTGTTCA ACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACCGAGAGTATCTCATCCTCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTTCACGACACTTTTACTCAGCCTACCAAACTGGTGATATCTGTAGTAGAACTGATGGTGCTGAAGCTNCCGTATCTGAAAGAGAAACATCTCAACATGATAAGATTATNCCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTAGCTGGGAGCAGGAGGCTTTGTTGACTAATCTAAGGCTTACACTGAACATATCAACTGATGAACATCTAGCTGAGTTGAGGAGTATGGTTTCCTCGGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCATTAAGTATGAGGTATTTGAGTAGTTGATGTTCTGTATTACCTGTTAAAAGAGTTACCTAGTCAGATCATTTTTGTACCAaaaaaaa ]
[-] EMBL CB678420 [ AGAGAAAAAATGGTGTTCATACAACTAACTTGGCTGGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGACACGGAGAGTATGTCATCCTCTGTTGGTAGTTGTAGTCCAACCAGTAGTCCTTGTAGTTCACGACAATTTTTCTCAGCATACCAAAATGGTGATATCTGTAGTAGAAATGATGGTGATGAAGCTGCCGTATATGAAAGAGAAACATCTCATCATGATAAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACAATGTTGGCATTGTATGTTTGTGGGTCAATTATCTGGGAGCAGGAGGCTTTGTTGTCTAATCTAAGGCTTGCACTGAACATATCATCTGATGAACATATAGCTGAGTCGAGGAGTATGGTTTCCTCGGTTATTACTTTTAGATAGCAGTTGTAGTTACTTGCTGGGTGACTTTTATGACATCTTTGTTGTCTTGAAATCATTGTAAGTTGGGAAATCCCTTTAAGTATGAGGTATTGGAGTAGTGGATGTTCTGTATTACCTGTTAAAAGAGTTACTTAGTCAGATCATTTTTGTGCCATAGACTTTCCAATGAAACATGAAATTTTGCTA]
consensusID : consensus_9390#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 453 fasta sequence
[GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC]
[+] EMBL CF196597 [GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAGCAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGCGCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATCGCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTGGAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTAGGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCTGTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGCTGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9390#1 -TCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAG 59
consensus_9390#2 --------------------GAGAAAAAAAAAGAGAGAAGAAATCACACCGCATTAGCAG 40
consensus_9390#0 ATCACAAGAAGAAGAAGAGAGAGAAAAAAAGAGAGAGAAGAAATCACACCGCATTAGCAG 60
********** *****************************
consensus_9390#1 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGC 119
consensus_9390#2 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCGCAGC 100
consensus_9390#0 CAGCAAAAGATTTCCTCGTTTCGCTTCACGAATTTTTGTTGCCCTCGCCCAATCCACAGC 120
******************************************************* ****
consensus_9390#1 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 179
consensus_9390#2 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 160
consensus_9390#0 GCGAGGAGAGGGAGTTCTCGCGGCGATTTCTCGTCGCCCCTCTCGGCCGCTGCCGGGATC 180
************************************************************
consensus_9390#1 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 239
consensus_9390#2 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 220
consensus_9390#0 GCAGCTCGCAAGTTTTGGAAAGGAAACAGGTTGATGAAGTTGGTCAAAGGGAGCAAGGTG 240
************************************************************
consensus_9390#1 GAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 299
consensus_9390#2 GAGGTGTTGCAGGAGGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 280
consensus_9390#0 GAGGTGTTGCAGGAAGCGGAGGTGCCCCTAGGTTCTTGGAGGGGTGCTGAGATTGTATTA 300
************** *********************************************
consensus_9390#1 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCT 359
consensus_9390#2 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCGGTTGACTCTTGCGCCGCT 340
consensus_9390#0 GGCAATGGGCAGAGCTTCTATGTGAGATATGATCCTTCTCCAGTTGACTCTTGCGCCGCT 360
***************************************** ******************
consensus_9390#1 GTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGC 419
consensus_9390#2 GTCGAGNNNGTGCAGNNNNNNNTGATAAGGCCTTGCCCCCCTCGNNNNNATTCAGTATGC 400
consensus_9390#0 GTCGAGAGGGTGCAGAGAAGGTTGATAAGGCCTTGCCCCCCTCGAGACGATTCAGTATGC 420
****** ****** ********************** ***********
consensus_9390#1 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATG 479
consensus_9390#2 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTNNNNNNNNNNNGC------- 453
consensus_9390#0 TGGGCTGTGGGCGACATCCTTGAGGCCTTTGATAGCTACTCATGGAAGATTGCTGAGATG 480
**************************************** **
consensus_9390#1 GTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTG 539
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GTGAGAGTGCTTGGCAAGGATTTCTATCTCGTCAGGCTCCTCGGATCTTCGCTGGAGCTG 540
consensus_9390#1 AGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTT 599
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 AGAACACATGCGTCGGAACTTCGGTTGAGGAAGCATTGGAAAGATGGCAAATGGACTGTT 600
consensus_9390#1 CTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGA 659
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CTTCAGAAGGATTCTACAAAGTGCTTCGGTGGTTCATTCAGAGGTCAACCAAAATCTGGA 660
consensus_9390#1 AATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTT 719
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 AATCTTGGAAGCAATTTTGGCAAGCAAAGGCAGCCATATTGTGCAATGGACAACAATCTT 720
consensus_9390#1 CTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCA 779
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CTACTGAAGAACCAAAAAGCTTTGGAGGGTGATAAGTCTAGAGGCATGAAGAGAAAATCA 780
consensus_9390#1 TCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGGAGAGATTACAG 839
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TCTGCTATTACACACCCAACCCAGTGCAGTGAAGTGACTAGAGGCATGAAGAGATTACAG 840
consensus_9390#1 ACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCT 899
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ACACCCCATAGAGATGGAAGGCACGCAGCGCTGGTTGCTGGAGTTTCTCCTCGTTTGGCT 900
consensus_9390#1 GAAAAGG--------TAGATGCTGTTGAT---TCCCCATGC---TTAATGCTGGGTGAAA 945
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GAAAAGGGCCGAAGTCGGAGGCTTGTAAAGCATCCTTCTGTAGGTCCATGTCGATGGAGG 960
consensus_9390#1 AATACAT-GCATGCTTCCTTAAATAAGAGAAAAAATGGTGTTCATACAACTAACTTGGCT 1004
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 AGTCTGCCACATGGTTTGCTGTATGTTAAATGTGGCAACATTC---CATCGAACTTCTGT 1017
consensus_9390#1 GGGGTAAATGTGGATACTGAAAATAAATTCCGTCCTTTAACAAGTGCTTATCCTAGTGAC 1064
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TGGTACCTTGTTTGTTTTTGTTATTCCTTTTGCTTTAGTATTATCTTTTCTGCTGCCTTT 1077
consensus_9390#1 ACCGAGAGTATCTCATCC--TCTGTTGGTAGTTGTAGTCCAAGCAGTAGTCCCTGTAGTT 1122
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TCTTGTGATTGGCCACTAAATTTCTCGAGAACATTATGAAGTGCATAATTTCCATAAGTT 1137
consensus_9390#1 CACGACACTTTTACTCAGCCTAC-CAAAC-----TGGTG---ATATCTGTAG----TAGA 1169
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TACACCACATTCATAGAAAATAAACAAAAGTACATGGTAGGCACATCTGGATCAATTACC 1197
consensus_9390#1 ACTGATGGTGCTGAAGCTGCCGTATCTGAA-AGAGAAACATCTCAACATGAT-------- 1220
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ACTAAAAAAAGGAAGATGAACTTATTTTCATATTGACATATTTTGATATATTTTTTTCTC 1257
consensus_9390#1 ---AAGATTATACCAAAGGAAGATACCCATTTGCTGGAGTTGCATGCTTATCGTGCAACA 1277
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TTTAGAATGTGAGGCAACTGAGAGGAGTACCTGCAGATTTTGCATGAC-ATGGTA-AATA 1315
consensus_9390#1 ATGTTGGCA-TTG-------TATGTTTGTGGGTCAATTAGCTGGGAGCAGG---AGGCTT 1326
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GTGTTTACAATTGGTAAGTTTAAATTTGTAGGTCAGTAATGATAATACAATTATAAACAT 1375
consensus_9390#1 TGTTGACTAATCTAAGGCTTACACTGAACATATCAACTG-ATGAACATCTAGCTGAGTTG 1385
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CGTAGTTCTAACCATGTGATTTTTAACACCTATTTGCAATATGCACATTACCCTTTGTTA 1435
consensus_9390#1 --AGGAGTATGGTTTCCTC--GGCTATTACTTCTAGATAGCAGTTGTAGTTACTTGCTTG 1441
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CCAAAAACAGAAATTACAGAGGGATCTTCAATCTGAATATGACCTGCAAAGGCTTTGTAA 1495
consensus_9390#1 GTGAC----TTTTATGACATCTTTGTTGTCT-TGAAATCATTGTAAGTTGGGAAATCCCA 1496
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GAGGCCTTATTTCAAGGTATATATGGTGACTACTGAATTAATGTATGCACCATGGCATTG 1555
consensus_9390#1 TTAAGTA-TGAGGTATTTGAGTAGTTGAT---GTTCTGT--------ATTACCTGTTAAA 1544
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TTGATCACTGAGGCATCTAGCTGGCTTGTTGAATTCCATCACAAGTCACTCCTTAGTGCA 1615
consensus_9390#1 AGAGTTACC-TAGTCAGATCATTT--TTGTACCATAGACCTTCCAAGA-----AACATGA 1596
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TGACTTATTATAGTTGACTCACATGGTTGCTTAGTGTTGTTTGAATGAGTTTTACCATCT 1675
consensus_9390#1 AATTTTGCTA-------------------------------------------------- 1606
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 AATATTTCTACATATGGATGCACAAATATTGTATTAGACATATGGATGCTTCCCACAGTG 1735
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CTCTATCGTTGTTTCATGATATCCTAGGAAGCTCAATTTCTATGTTCAGAAGAGTGTGAT 1795
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GCTGAATTGTTTTTGCTTAGGAGAGAGTGTGCAGTCAGCTCAACTTTCCTATGCAGATAA 1855
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GTTGTTTGCAGTATGAAAAGCAGGGAAAATTTCCAAAAGATTACTGGTGGTGTCACTTTG 1915
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TCAACAACAACTACTTGTGTTACTGGTGGTCAATACCTTCAAGAACTCACGTGAGTTTGC 1975
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TAAGTTGAGGACCTGCAACTGACTTCCAATTAAACAGAAGTTAAGGTAGGCAGGCGCACC 2035
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TTGCAATTCGCAGCAGCAAGTCAGGTGAGGATGCACCATATTGTTTGCCTCACCTGTACT 2095
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CGTATCTGCAAAATATAATTTACCTCTTTTAATGTTCATCTGGAAAATTACTCTTTAATT 2155
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CAGATGCTTCACAAGGACTCAGGAGGTTCTCACGCAAAACGTGTGTCATGGTGTTTGTGT 2215
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GTCAATCATTATTTGTTTTTAATTGCAAGTATTTCAAGTGGCTTGTTTGGCAGCAAAGTG 2275
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 TTACAATTTATTAGAGTACAATTAATTATGTCCTGAATTAATGATCAAAGTACGAGACAC 2335
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GCACTGAAAAAGGCTAGAGAGTTCTTGGCCGTCTTCTGTTCTGTGATTGTGGCATCTTGC 2395
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ATGCAGCTGGTATACTTTGATGGCTCCTAGCTGCAATTCTTTAAGTTGTAGTACAGTGTA 2455
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ATATGCCATTACTTGTTCCGGATGTACTGAAAGATGTAAAGTTGCTAGATCTGCATTGCT 2515
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ACGAATAATTTGTTCAGGTTGCACGCATTTGACAAGTTCCCTTTTCAGAAGAAGCATTAT 2575
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 ATGGTGCACCTGGTGTTTTCAGATGAGCAAGTGAGAAACCTCCGTTGAAGCCAACTGCAA 2635
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 GCAAAGAATATATGGAACATGTCCTTTGTCTCATTAGTTTGTATTAAACCGATGGTGATG 2695
consensus_9390#1 ------------------------------------------------------------
consensus_9390#2 ------------------------------------------------------------
consensus_9390#0 CATTCCTTTTAATTCCATAAAAATATATGATGTGTTTGTTATTGAACTGTGTAATAATAC 2755
consensus_9390#1 ------------------------------
consensus_9390#2 ------------------------------
consensus_9390#0 AGACAAATGTCTGTTCAAATAAAGAGTCAC 2785
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||