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Oryza sativa
cluster # 9410 cluster # 9410       Sequences # 6       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9410#0 length = 1729 sequences # 5  
 consensus_9410#1 length = 1261 sequences # 1  
consensusID : consensus_9410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1729
fasta sequence 
                              [GACGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCGCCAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGGAGGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAGCAGCAGCAGCAGCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTGGGCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTGCTGTCTCGCTCCCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGGCTTCTCGAGCTGCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGCGAGTTCGGCGCCGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATGCGTTGCAGCGTGCGCAGCGCGAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGACACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGC-GTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCAC-TGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAAAAATCTTTTGTGCTTCTCATTTATATTCAATAAATTC]

[+] EMBL AU162689             [GACGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK071110             [       CCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCGCCAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGGAGGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAGCAGCAGCAGCAGCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTGGGCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTGCTGTCTCGCTCCCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGGCTTCTCGAGCTGCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGCGAGTTCGGCGCCGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATGCGTTGCAGCGTGCGCAGCGCGAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGACACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGC GTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCAC TGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATTC]
[+] EMBL CA305627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGATCACCCGGACACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGCNGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGANAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCACTTGTAT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU056485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGANAGAGAGGCTGCNGAGGCTGAGCGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTNACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCAC TGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAAAAAaaa                               ]
[+] EMBL BM420994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCAGTTCCACTACCATCACTTCAC TGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCC AACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAA TTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAAAAA                                  ]




>consensus_9410#0
GACGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCG
CCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCC
AAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGAC
CGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTG
CACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCGC
CAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGGA
GGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAGCAGCAGCAGCA
GCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTGG
GCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTGCTGTCTCGCTC
CCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGGCTTCTCGAGCT
GCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGCGAGTTCGGCGC
CGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATGCGTTGCAGCGTGCGCAGCG
CGAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGACACCCCTGCCTT
CTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGC
GTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATC
GAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCG
GCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGA
AGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCA
ACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAG
GGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAG
AAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGA
AGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAA
AGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAG
ATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTGCTT
GAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAA
ACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGAT
AGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCC
TTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGT
CTTCGATGCAAAAAATCTTTTGTGCTTCTCATTTATATTCAATAAATTC

consensusID : consensus_9410#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1261
fasta sequence 
                              [CGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCCGGACACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATTC]

[+] EMBL AK061230             [CGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCCGGACACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATGTCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATTC]




>consensus_9410#1
CGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCC
CCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCCAA
ATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCG
TCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCA
CCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCCGGA
CACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGA
GAACTTCGTTGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAG
CCTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAAT
TGTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCA
AGGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAG
GCTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGC
TGATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGC
AGAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGC
AGCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGC
AGAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCG
CAAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTC
TTTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATA
CGGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTT
GTTTATTGAGATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGG
TATAGGTGCTCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTAT
ACTGAGAAATGTCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATT
C

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9410#0      GACGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCG 60
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      CCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGCC 120
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      AAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGAC 180
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      CGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTG 240
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      CACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCGC 300
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      CAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGGA 360
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      GGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAGCAGCAGCAGCA 420
consensus_9410#1      ------------------------------------------------------------
                                                                                  

consensus_9410#0      GCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTGG 480
consensus_9410#1      ---------------------------------------CGTCACCACTACTG--ACTCG 19
                                                             ***   * *   **    * *

consensus_9410#0      GCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTGCTGTCTCGCTC 540
consensus_9410#1      TCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCCGCCCCTTCTCGCC-TCTTCCTT 78
                       **     **   *** **   * *   *  *   **  *        **  ***  ** 

consensus_9410#0      CCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGGCTTCTCGAGCT 600
consensus_9410#1      CGTGCTAACTACTACCGCCGC-CGCCGCCGCCGCCGACGCCAAATCCCCAAACCCTAGCT 137
                      * *    *       *  *** *   ** *  ** ** *      **     * * ****

consensus_9410#0      GCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGCGAGTTCGGCGC 660
consensus_9410#1      -CCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGACCGTCGACGA---CAAGGT 193
                       ** ** *****  *   * ** * * *  * ********  **    ***   *   * 

consensus_9410#0      CGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATG--CGTTGCAGCGTGCGCAG 718
consensus_9410#1      CAGCT---ACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCTGCACCGAGATCCT 250
                      * **     *  ***    *** ***    ** **   * *  *  **** ** *  *  

consensus_9410#0      CGC-GAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGACACCCCTGC 777
consensus_9410#1      CGCCGCCCACAACTGGGACCTCCAGC-TCGCCGTCTCCTCCATCACCCGGACACCCCTGC 309
                      *** *   ****      * **  *   *  *    **   *******************

consensus_9410#0      CTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGT 837
consensus_9410#1      CTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGT 369
                      ************************************************************

consensus_9410#0      TGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGC 897
consensus_9410#1      TGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGC 429
                      ************************************************************

consensus_9410#0      ATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTT 957
consensus_9410#1      ATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTT 489
                      ************************************************************

consensus_9410#0      GCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGT 1017
consensus_9410#1      GCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGT 549
                      ************************************************************

consensus_9410#0      TGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAA 1077
consensus_9410#1      TGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAA 609
                      ************************************************************

consensus_9410#0      TCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGC 1137
consensus_9410#1      TCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGC 669
                      ************************************************************

consensus_9410#0      CAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGA 1197
consensus_9410#1      CAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGA 729
                      ************************************************************

consensus_9410#0      GAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAA 1257
consensus_9410#1      GAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAA 789
                      ************************************************************

consensus_9410#0      AGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGA 1317
consensus_9410#1      AGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGA 849
                      ************************************************************

consensus_9410#0      GAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAG 1377
consensus_9410#1      GAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAG 909
                      ************************************************************

consensus_9410#0      GAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTG 1437
consensus_9410#1      GAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTG 969
                      ************************************************************

consensus_9410#0      CTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGA 1497
consensus_9410#1      CTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGA 1029
                      ************************************************************

consensus_9410#0      AAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGA 1557
consensus_9410#1      AAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGA 1089
                      ************************************************************

consensus_9410#0      GATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGC 1617
consensus_9410#1      GATAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGC 1149
                      ************************************************************

consensus_9410#0      TCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAA 1677
consensus_9410#1      TCCTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAA 1209
                      ************************************************************

consensus_9410#0      TGTCTTCGATGCAAAAAATCTTTTGTGCTTCTCATTTATATTCAATAAATTC 1729
consensus_9410#1      TGTCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATTC 1261
                      ***************   **********************************


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)