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Oryza sativa
cluster # 9414 cluster # 9414       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9414#0 length = 1132 sequences # 1  
consensus_9414#1 length = 836 sequences # 1  
consensus_9414#2 length = 748 sequences # 2  
consensus_9414#3 length = 712 sequences # 1  
consensus_9414#4 length = 689 sequences # 1  

consensusID : consensus_9414#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1132
fasta sequence
                              [CTGAACAATCAGAAGTTGGCAAGTCTGGAGATGCAATATACATCATTTGTAAAGAGAATGAAATTGTGAATTCCGAGGGACTAGAATGGCCTAATTCATCCAGTGGCCTTTCGAATTCATAAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGAAGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTTAAAGTGGTATTTATTTATCATGGTCAATAAAGCAGAGGAGAGCTGCATCCTGATCCACGATTTCGTGTCATCAACGCTGTATCGCTGGCTGTTGAGGATGATGCTGACAACACTACTGAAATCATGTGCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATCTTATTAATGAAATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGGGATCTTTAGGATTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCAAATCAGATGAAACATCCACCTATGAACCCAGTGGAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATTGGAGTCTTACTCATGCTAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCGTGCAGAAATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGAGGAAGGTACCATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGACGAGGAAGATACCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATATTAAATATACTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGCTATTTGAGATTTCCTTTGTATTTCCAGTTGAAAACTTTTATCAATTTTGCATCTTCTCCTTAACAATCTCCTAGCCACGATTTATCACACAGAAATGCAGTTGG]

[+] EMBL AK108416             [CTGAACAATCAGAAGTTGGCAAGTCTGGAGATGCAATATACATCATTTGTAAAGAGAATGAAATTGTGAATTCCGAGGGACTAGAATGGCCTAATTCATCCAGTGGCCTTTCGAATTCATAAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGAAGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTTAAAGTGGTATTTATTTATCATGGTCAATAAAGCAGAGGAGAGCTGCATCCTGATCCACGATTTCGTGTCATCAACGCTGTATCGCTGGCTGTTGAGGATGATGCTGACAACACTACTGAAATCATGTGCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATCTTATTAATGAAATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGGGATCTTTAGGATTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCAAATCAGATGAAACATCCACCTATGAACCCAGTGGAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATTGGAGTCTTACTCATGCTAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCGTGCAGAAATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGAGGAAGGTACCATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGACGAGGAAGATACCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATATTAAATATACTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGCTATTTGAGATTTCCTTTGTATTTCCAGTTGAAAACTTTTATCAATTTTGCATCTTCTCCTTAACAATCTCCTAGCCACGATTTATCACACAGAAATGCAGTTGG]


>consensus_9414#0 CTGAACAATCAGAAGTTGGCAAGTCTGGAGATGCAATATACATCATTTGTAAAGAGAATG AAATTGTGAATTCCGAGGGACTAGAATGGCCTAATTCATCCAGTGGCCTTTCGAATTCAT AAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGA AGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTA AGTTAAAGTGGTATTTATTTATCATGGTCAATAAAGCAGAGGAGAGCTGCATCCTGATCC ACGATTTCGTGTCATCAACGCTGTATCGCTGGCTGTTGAGGATGATGCTGACAACACTAC TGAAATCATGTGCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGA TAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATC TTATTAATGAAATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGG GATCTTTAGGATTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGA CACCACCAAATCAGATGAAACATCCACCTATGAACCCAGTGGAGGAATCTTGTCAGGAGT TTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATTGGAGTC TTACTCATGCTAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCA TGCGTGCAGAAATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGA GGAAGGTACCATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGAC GAGGAAGATACCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATAT TAAATATACTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAA GATATTGCTATTTGAGATTTCCTTTGTATTTCCAGTTGAAAACTTTTATCAATTTTGCAT CTTCTCCTTAACAATCTCCTAGCCACGATTTATCACACAGAAATGCAGTTGG



consensusID : consensus_9414#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 836
fasta sequence
                              [GGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTAATANCAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCTGTATCGCTGGCCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATGGAGTTTCCGGTTGTGACGTAAATGTATTTCCTGGAGAGAGGGAACTTTTGAACCATCTTATTAATGCAATATGTTCAATTGATCCAGATATTATAGTTGGATGGGAGATTCAGTTAGGATCTTTAGGATTCCTTGCTGAAAGAGCTGCTCATCTGGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCGCATCAGATGAAACATCCACCTATGAACCCAGTGGACGAATCTAGTCAGGAGCTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCCAGTGAAAACAATTGGAGTCATGCTCATGCTAGTGGTATACATGTTGATGGACGAATCATACTGAACTTATGGCGTCTCATGCGTGCAGAAGTTAAACTTAATAATTACTCCCTCGAGGCTGTAGCTAATGAAGTCTTGAGGAGGAAGGTACCATTAGTACCAACTAAGATATTGAATCGATGGTTTGCAACAGGTTCTGGACGAGGAAGATATCGATGCATAGAATATGTTAATAAGAGATCTTCTCTCAACCTTGAAATATTAAATCAACTTGACCTGGTAAACCGGACATCTGAACTTGCCCGTGTATTTGGTATTGAAATCGTCTC]

[-] EMBL CB669697             [GGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTAATANCAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCTGTATCGCTGGCCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATGGAGTTTCCGGTTGTGACGTAAATGTATTTCCTGGAGAGAGGGAACTTTTGAACCATCTTATTAATGCAATATGTTCAATTGATCCAGATATTATAGTTGGATGGGAGATTCAGTTAGGATCTTTAGGATTCCTTGCTGAAAGAGCTGCTCATCTGGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCGCATCAGATGAAACATCCACCTATGAACCCAGTGGACGAATCTAGTCAGGAGCTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCCAGTGAAAACAATTGGAGTCATGCTCATGCTAGTGGTATACATGTTGATGGACGAATCATACTGAACTTATGGCGTCTCATGCGTGCAGAAGTTAAACTTAATAATTACTCCCTCGAGGCTGTAGCTAATGAAGTCTTGAGGAGGAAGGTACCATTAGTACCAACTAAGATATTGAATCGATGGTTTGCAACAGGTTCTGGACGAGGAAGATATCGATGCATAGAATATGTTAATAAGAGATCTTCTCTCAACCTTGAAATATTAAATCAACTTGACCTGGTAAACCGGACATCTGAACTTGCCCGTGTATTTGGTATTGAAATCGTCTC]


>consensus_9414#1 GGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAG GTAATANCAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCT GTATCGCTGGCCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGT GGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATGGAGTTTCCGGTTGTGACGTA AATGTATTTCCTGGAGAGAGGGAACTTTTGAACCATCTTATTAATGCAATATGTTCAATT GATCCAGATATTATAGTTGGATGGGAGATTCAGTTAGGATCTTTAGGATTCCTTGCTGAA AGAGCTGCTCATCTGGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCGCATCAG ATGAAACATCCACCTATGAACCCAGTGGACGAATCTAGTCAGGAGCTTCCTGGAGCATCT TCAGCTGATGATGTTATTGATGATGCCAGTGAAAACAATTGGAGTCATGCTCATGCTAGT GGTATACATGTTGATGGACGAATCATACTGAACTTATGGCGTCTCATGCGTGCAGAAGTT AAACTTAATAATTACTCCCTCGAGGCTGTAGCTAATGAAGTCTTGAGGAGGAAGGTACCA TTAGTACCAACTAAGATATTGAATCGATGGTTTGCAACAGGTTCTGGACGAGGAAGATAT CGATGCATAGAATATGTTAATAAGAGATCTTCTCTCAACCTTGAAATATTAAATCAACTT GACCTGGTAAACCGGACATCTGAACTTGCCCGTGTATTTGGTATTGAAATCGTCTC



consensusID : consensus_9414#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 748
fasta sequence
                              [TAGTTCGCTGAGCAATAATATTCCTCAGCTTGATGGGTCATCTGATGAAAACCAGGAAGTTCCACAAGAAGATGGTAAGTATAAAATCAACAGGAAAAGTGCAGGATTGCCTAGTTACTCATCTCCTCAAAGTAGTTGAACTTCTCTGGTGCTCTTTGCCACCTCCCATTAAAAAGAGGTCAGATGTAAATGTTGATGGTCATGTTAAAACCTCTCCAGACGGTGCGATGCCAACTGAGAAGGAACCAAGTGTTTCTTTCATGAGTAGAACTGGAAAGAACTCCCATGCTACCACAGATAAGACTGGCAGGGAATCTTTTAGTCGATCAGGTGAACATGACCCATTGTGTGATTCTGTGAGGGTCTGAGAGACTTGATGGATGGAGGGAGGAGGATATCTTTTCAGTCTGAACAATCAGAAGTTGGGCAAGTCTGGGAGATGGCATATACATCATTTGTAAAGAGAATGAAATTGTGAATTCCGAGGGACTAGAATGGCCTGATTCATCCAGTGGCCTTTCGAATTCATAAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGAAGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTTAAAGTGGTATTTATTTATCATGGTCAATGTAAGTTCCACAAGTGATCTTTATTTTATCATGGTGAATGCAATTCATTTGATGTAAAAAAAAAAAA]

[+] EMBL AU057401             [TAGTTCGCTGAGCAATAATATTCCTCAGCTTGATGGGTCATCTGATGAAAACCAGGAAGTTCCACAAGAAGATGGTAAGTATAAAATCAACAGGAAAAGTGCAGGATTGCCTAGTTACTCATCTCCTCAAAGTAGTTGAACTTCTCTGGTGCTCTTTGCCACCTCCCATTAAAAAGAGGTCAGATGTAAATGTTGATGGTCATGTTAAAACCTCTCCAGACGGTGCGATGCCAACTGAGAAGGAACCAAGTGTTTCTTTCATGAGTAGAACTGGAAAGAACTCCCATGCTACCACAGATAAGACTGGCAGGGAATCTTTTAGTCGATCAGGTGAACATGACCCATTGTGTGATTCTGTGAGGGTCTGAGAGACTTGATGGATGGAGGGAGGAGGATATCTTTTCAGTCTGAACAATCAGAAGTTGGGCAAGTCTGGGAGATGGCA                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU057402             [                                                                                                                                                                                                                                                                                                         ATAAGANTGGCAGGGAATCTTTTAGNCGANCAGGTGAACATGACCCATTGTGTGATTCTGTGAGGGTCTGAGAGACTTGAT GAT GA GGAGGAGGATATCTTTTCAGTCTGAACAATCAGAAGTT GGCAAGTCT GGAGATGCAATATACATCATTTGTAAAGAGAATGAAATTGTGAATTCCGAGGGACTAGAATGGCCTGATTCATCCAGTGGCCTTTCGAATTCATAAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGAAGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTTAAAGTGGTATTTATTTATCATGGTCAATGTAAGTTCCACAAGTGATCTTTATTTTATCATGGTGAATGCAATTCATTTGATGTAAAAAAAAAAAA]


>consensus_9414#2 TAGTTCGCTGAGCAATAATATTCCTCAGCTTGATGGGTCATCTGATGAAAACCAGGAAGT TCCACAAGAAGATGGTAAGTATAAAATCAACAGGAAAAGTGCAGGATTGCCTAGTTACTC ATCTCCTCAAAGTAGTTGAACTTCTCTGGTGCTCTTTGCCACCTCCCATTAAAAAGAGGT CAGATGTAAATGTTGATGGTCATGTTAAAACCTCTCCAGACGGTGCGATGCCAACTGAGA AGGAACCAAGTGTTTCTTTCATGAGTAGAACTGGAAAGAACTCCCATGCTACCACAGATA AGACTGGCAGGGAATCTTTTAGTCGATCAGGTGAACATGACCCATTGTGTGATTCTGTGA GGGTCTGAGAGACTTGATGGATGGAGGGAGGAGGATATCTTTTCAGTCTGAACAATCAGA AGTTGGGCAAGTCTGGGAGATGGCATATACATCATTTGTAAAGAGAATGAAATTGTGAAT TCCGAGGGACTAGAATGGCCTGATTCATCCAGTGGCCTTTCGAATTCATAAATGTGTTTT TCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGAAGAATGAAGTA TTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTTAAAGTGG TATTTATTTATCATGGTCAATGTAAGTTCCACAAGTGATCTTTATTTTATCATGGTGAAT GCAATTCATTTGATGTAAAAAAAAAAAA



consensusID : consensus_9414#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 712
fasta sequence
                              [GAGACAAGGGGGAACCGATCTTTCNACCAAGAAATTAAAAATCTGGCTGATTGGCATGACTTTTCCCAGATCTCTGGTGGAGATGAGAAGGATAAACTTACACCTCTCAGTCAAATTGGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTTGTACCACATTCTTTTTTCTTTTGTTCCCGACGTATATGTTTCTTTTTGTTCACTCTTCATACAATGTAGGTGCTAATTTACTTTTCTTTTTTAGAAATATCTATGTCTGCAACCAGTAGGAGTTTTTTTTTTTTTTTTGGTTATTAATCATGCCAGTTTGACTTGCTCTATCCAGTGAAAAGAAATATGCAAAGTTGGATTACCACATAACATTTCTTTCATAGCTACAGGTAATAACAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCTGTATCGCTGGCCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGGTTGTGCGAAATCACTCGATCTTGGAATTGNTTGGTGGTTTACTTTTCCATTTCATCTTGGTTTGGCACTAATCAGNCCCTTCNTAATTTTTGGTTTTGGCAATCAACACCACTATCTCTTAATAAGTCTACAGGAATCTCAAGAAATTGAAC]

[+] EMBL CA766503             [GAGACAAGGGGGAACCGATCTTTCNACCAAGAAATTAAAAATCTGGCTGATTGGCATGACTTTTCCCAGATCTCTGGTGGAGATGAGAAGGATAAACTTACACCTCTCAGTCAAATTGGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTTGTACCACATTCTTTTTTCTTTTGTTCCCGACGTATATGTTTCTTTTTGTTCACTCTTCATACAATGTAGGTGCTAATTTACTTTTCTTTTTTAGAAATATCTATGTCTGCAACCAGTAGGAGTTTTTTTTTTTTTTTTGGTTATTAATCATGCCAGTTTGACTTGCTCTATCCAGTGAAAAGAAATATGCAAAGTTGGATTACCACATAACATTTCTTTCATAGCTACAGGTAATAACAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCTGTATCGCTGGCCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGGTTGTGCGAAATCACTCGATCTTGGAATTGNTTGGTGGTTTACTTTTCCATTTCATCTTGGTTTGGCACTAATCAGNCCCTTCNTAATTTTTGGTTTTGGCAATCAACACCACTATCTCTTAATAAGTCTACAGGAATCTCAAGAAATTGAAC]


>consensus_9414#3 GAGACAAGGGGGAACCGATCTTTCNACCAAGAAATTAAAAATCTGGCTGATTGGCATGAC TTTTCCCAGATCTCTGGTGGAGATGAGAAGGATAAACTTACACCTCTCAGTCAAATTGGA TTCTGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTT GTACCACATTCTTTTTTCTTTTGTTCCCGACGTATATGTTTCTTTTTGTTCACTCTTCAT ACAATGTAGGTGCTAATTTACTTTTCTTTTTTAGAAATATCTATGTCTGCAACCAGTAGG AGTTTTTTTTTTTTTTTTGGTTATTAATCATGCCAGTTTGACTTGCTCTATCCAGTGAAA AGAAATATGCAAAGTTGGATTACCACATAACATTTCTTTCATAGCTACAGGTAATAACAG AAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGCCATCAATGCTGTATCGCTGG CCGTTGAGGATGATGCTGACAATACTATTGAAGTTCATGTGCTTATACGTGGAAACAATG ACAGTTCACACAGGAGGAGGTTGTGCGAAATCACTCGATCTTGGAATTGNTTGGTGGTTT ACTTTTCCATTTCATCTTGGTTTGGCACTAATCAGNCCCTTCNTAATTTTTGGTTTTGGC AATCAACACCACTATCTCTTAATAAGTCTACAGGAATCTCAAGAAATTGAAC



consensusID : consensus_9414#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [GCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATCTTATTAATGAAATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGGGATCTTTAGGATTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCAAATCAGATGAAACATCCACNCTATGAACCCAGTGGAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATNGGAGTCATACTCATGCTAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCGTGCAGAAATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGAGGAAGGTACCATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGACGAGGAAGATACCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATATTAAATATACTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGCTATTTGAGATTTCCTTAAAAAAAAAAAAAAA]

[-] EMBL CA763524             [GCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATCTTATTAATGAAATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGGGATCTTTAGGATTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCAAATCAGATGAAACATCCACNCTATGAACCCAGTGGAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATNGGAGTCATACTCATGCTAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCGTGCAGAAATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGAGGAAGGTACCATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGACGAGGAAGATACCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATATTAAATATACTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGCTATTTGAGATTTCCTTAAAAAAAAAAAAAAA]


>consensus_9414#4 GCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAACCTGGATAGAGTTGCCG GTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCATCTTATTAATGAA ATATGTTCAATCGATCCAGATATTATAGTTGGATGGGAGATTCAGTTGGGATCTTTAGGA TTTTTTGCTGAAGGAGCTGGTATAGGCTTACTGAAAAGAATTTCAAGGACACCACCAAAT CAGATGAAACATCCACNCTATGAACCCAGTGGAGGAATCTTGTCAGGAGTTTCCTGGAGC ATCTTCAGCTGATGATGTTATTGATGATGCTAGTGAGAGCAATNGGAGTCATACTCATGC TAGTGGTATACATGTTGATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCGTGCAGA AATTAAGCTTAATAATTACTCCCTTGAGGCTGTAGCTGATGAAGTCTTGAGGAAGGTACC ATTAGTACCAACCAAGATATTGAATCGATGGTTTGCAACAGGTCCTGGACGAGGAAGATA CCGGTGCATAGAATATGTTAACAATTGATCTTCTCTCAACCTTGAAATATTAAATATACT TGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGCTA TTTGAGATTTCCTTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9414#0      CTGAACAATCAGAAGTTGGCAAGTCTGGAGATGCAATATACATCATTTGTAAAGAGAATG 60
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      ------------------------------------------------------------
consensus_9414#2      ------------------------------------------------------------
consensus_9414#3      ------------------------------------------------------------
                                                                                  

consensus_9414#0      AAATTGTGAATTCCGAGGGACTAGAATGGCCTAATTCATCCAGTGGCCTTTCGAATTCAT 120
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      ------------------------------------------------------------
consensus_9414#2      ------------------------------------------------------------
consensus_9414#3      ------------------------------------------------------------
                                                                                  

consensus_9414#0      AAATGTGTTTTTCTGGCAGTGAATATTAGCAGATGACCTTTGCACAGAAGCCTCCAATGA 180
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      ------------------------------------------------------------
consensus_9414#2      ------------------------------------------------------------
consensus_9414#3      ------------------------------------------------------------
                                                                                  

consensus_9414#0      AGAATGAAGTATTATGTTGTTTGGAGGGCTCTTCAGCAGGTAGTGA-GCTGCCTCAGTTT 239
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      -----------------------GGATTCTGTGATCCTGCTAGTATTGGTGGCGGACAGC 37
consensus_9414#2      ------------------------------------------------------------
consensus_9414#3      ------------------------------------------------------------
                                                                                  

consensus_9414#0      AAGTTAAAGTGGTATTTATTTATCATGGTCAATAAAGCAGAGGAGAGCTGCATCCTGATC 299
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      AACTGACTATAATTAGCATAGAGGTAATANCAGAAAGCAGAGGAGAGCTGCGTCCTGATC 97
consensus_9414#2      ------------------------------------------------------------
consensus_9414#3      ------------------------------------------------------------
                                                                                  

consensus_9414#0      CACGATTTCGTGTCATCAACGCTGTATCGCTGGCTGTTGAGGATGATGCTGACAACACTA 359
consensus_9414#4      ------------------------------------------------------------
consensus_9414#1      CACGATTTGATGCCATCAATGCTGTATCGCTGGCCGTTGAGGATGATGCTGACAATACTA 157
consensus_9414#2      ----------------TAGTTCGCTGAGCAATAATATTCCTCAGCTTGATGGGTCATCTG 44
consensus_9414#3      ------------------------------------------------------GAGACA 6
                                                                                  

consensus_9414#0      CTGAAATCATGTGCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAAC-CTG 418
consensus_9414#4      ------------GCTTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAAC-CTG 47
consensus_9414#1      TTGAAGTTCATGTGCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGAAAC-CTG 216
consensus_9414#2      ATGAAAACCAGGAAGTTCCACAAGAAGATGGTAAGTATAAAATCAACAGGAAAAGTGCAG 104
consensus_9414#3      AGGGGGAACCGATCTTTCNACCAAGAAAT--TAAAAATCTGGCTGATTGGCATGACTTTT 64
                                     **  **    * *   * *   *          **          

consensus_9414#0      GATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCA 478
consensus_9414#4      GATAGAGTTGCCGGTTGCGACATAAACGTATTTCCTTGAGAGACAGAAACTTTTAAACCA 107
consensus_9414#1      GATGGAGTTTCCGGTTGTGACGTAAATGTATTTCCTGGAGAGA-GGGAACTTTTGAACCA 275
consensus_9414#2      GATTGCCTAGTTACTCATCTCCTCAAAGTAGTT---GAACTTCTCTGGTGCTCTTTGCCA 161
consensus_9414#3      CCCAGA-TCTCTGGTGGAGATGAGAAGGATAAACTTACACCTCTCAGTCAAATTGGATTC 123
                          *  *      *         ** *          *              *      

consensus_9414#0      TCTTATTAATGAAATATGTTCAATCGAT-CCAGATATT-ATAGTTGGATGGGAGATTCAG 536
consensus_9414#4      TCTTATTAATGAAATATGTTCAATCGAT-CCAGATATT-ATAGTTGGATGGGAGATTCAG 165
consensus_9414#1      TCTTATTAATGCAATATGTTCAATTGAT-CCAGATATT-ATAGTTGGATGGGAGATTCAG 333
consensus_9414#2      CCTC-CCATTAAAAAGAGGTCA---GAT-GTAAATGTTGATGGTCATGTTAAAACCTCT- 215
consensus_9414#3      TGTGATCCTGCTAGTATTGGTGGCGGACAGCAACTGACTATAATTAGCATAGAGGTTGTA 183
                        *         *            **    *  *    **  *        *   *   

consensus_9414#0      TTGGGATCTTTAGGATTTT-TTGCTGAAGGAGCTG---------GTATAGGCTTA-CTGA 585
consensus_9414#4      TTGGGATCTTTAGGATTTT-TTGCTGAAGGAGCTG---------GTATAGGCTTA-CTGA 214
consensus_9414#1      TTAGGATCTTTAGGATTCC-TTGCTGAAAGAGCTGCTCATCTGGGTATAGGCTTA-CTGA 391
consensus_9414#2      CCAGACGGTGCGATGCCAA-CTGAGAAGGAACCAAGTGTTTCTTTCATGAGTAGAACTGG 274
consensus_9414#3      CCACATTCTTTTTTCTTTTGTTCCCGACGTATATGTTTCTTTTTGTTCACTCTTCATACA 243
                              *            *    *   *                             

consensus_9414#0      AAAGAATTTCAAGGACACCAC---CAAATCAGATGAAACATCCACC-TATGAACCCAGTG 641
consensus_9414#4      AAAGAATTTCAAGGACACCAC---CAAATCAGATGAAACATCCACNCTATGAACCCAGTG 271
consensus_9414#1      AAAGAATTTCAAGGACACCAC---CGCATCAGATGAAACATCCACC-TATGAACCCAGTG 447
consensus_9414#2      AAAGAACTCCCATGCTACCACAGATAAGACTGGCAGGGAATCTTTT-AGTCGATCAGGTG 333
consensus_9414#3      ATGTAGGTGCTAATTTACTTT----TCTTTTTTAGAAATATCTATG-TCTGCAACCAGTA 298
                      *   *  * * *    **                     ***       *  * *  ** 

consensus_9414#0      GAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAG---CTGATGATGTTATTGATGAT 698
consensus_9414#4      GAGGAATCTTGTCAGGAGTTTCCTGGAGCATCTTCAG---CTGATGATGTTATTGATGAT 328
consensus_9414#1      GACGAATCTAGTCAGGAGCTTCCTGGAGCATCTTCAG---CTGATGATGTTATTGATGAT 504
consensus_9414#2      AACATGACCCATTGTGTGATTCTGTGAGGGTCTGAGAGACTTGATGGATGGAGGGAGGAG 393
consensus_9414#3      GGAGTTTTTTTTT-----TTTTTTTGGTTATTAATCA----TGCCAGTTTGACTTGCTCT 349
                                 *       **    *    *          **        *        

consensus_9414#0      G--------CTAGTGAGAGCAATTGGAGTCTTACTCATGCTAG----TGGTATACATGTT 746
consensus_9414#4      G--------CTAGTGAGAGCAATNGGAGTCATACTCATGCTAG----TGGTATACATGTT 376
consensus_9414#1      G--------CCAGTGAAAACAATTGGAGTCATGCTCATGCTAG----TGGTATACATGTT 552
consensus_9414#2      GATATCTTTTCAGTCTGAACAATCAGAAGTTGGGCAAGTCTGGGAGATGGCATATACATC 453
consensus_9414#3      A-------TCCAGTGAAAAGAAAT--ATGCAAAGTTGGATTACCACATAACATTTCTTTC 400
                                 ***   *  **    *             *      *   **     * 

consensus_9414#0      ---GATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCG-TG--CAGAAATTAAGCTT 800
consensus_9414#4      ---GATGGAAGAATCATTCTGAACTTATGGCGTCTCATGCG-TG--CAGAAATTAAGCTT 430
consensus_9414#1      ---GATGGACGAATCATACTGAACTTATGGCGTCTCATGCG-TG--CAGAAGTTAAACTT 606
consensus_9414#2      ---ATTTGTAAAG--AGAATGAAATTGTGAATTCCGAGGGACTA--GAATGGCCTGATTC 506
consensus_9414#3      ATAGCTACAGGTAATAACAGAAAGCAGAGGAGAGCTGCGTCCTGATCCACGATTTGATGC 460
                           *         *     **     *         *   *                 

consensus_9414#0      AATAATTACTCCCTTGA-GGCTGTAGCTGATGAAGTCTTGAGGA---AGGTACCATTAGT 856
consensus_9414#4      AATAATTACTCCCTTGA-GGCTGTAGCTGATGAAGTCTTGAGGA---AGGTACCATTAGT 486
consensus_9414#1      AATAATTACTCCCTCGA-GGCTGTAGCTAATGAAGTCTTGAGGAGGAAGGTACCATTAGT 665
consensus_9414#2      ATCCAGTGGCCTTTCGA-ATTCATA---AATGTGTTTTTCTGGC---AGTGAATATTAGC 559
consensus_9414#3      CATCAATGCTGTATCGCTGGCCGTTGAGGATGA--TGCTGACAATACTATTGAAGTTCAT 518
                          * *      * *       *     ***   *  *                **   

consensus_9414#0      ACCAACCAAGATATTGAATCGATGGT--TTGCAACAGGTCCTGGACGAG-GAAGATACCG 913
consensus_9414#4      ACCAACCAAGATATTGAATCGATGGT--TTGCAACAGGTCCTGGACGAG-GAAGATACCG 543
consensus_9414#1      ACCAACTAAGATATTGAATCGATGGT--TTGCAACAGGTTCTGGACGAG-GAAGATATCG 722
consensus_9414#2      A-----GATGACCTTTGCACAGAAGC--CTCCAATGAA----GAATGAA-GTATTATGTT 607
consensus_9414#3      GT--GCTTATACGTGGAAACAATGACAGTTCACACAGGAGGAGGTTGTGCGAAATCACTC 576
                                *  *     *         *   *        *   *   * *       

consensus_9414#0      GTGCATAGAATATGTTAACAATTGATCTTCT--CTCAACCTTGA---AATATTAAATATA 968
consensus_9414#4      GTGCATAGAATATGTTAACAATTGATCTTCT--CTCAACCTTGA---AATATTAAATATA 598
consensus_9414#1      ATGCATAGAATATGTTAATAAGAGATCTTCT--CTCAACCTTGA---AATATTAAATCAA 777
consensus_9414#2      GTTTGGAGGGCTCTTCAGCAGGTAGTGAGCTGCCTCAGTTTAAGTT-AAAGTGGTATTTA 666
consensus_9414#3      GATCTTGGAATTGNTTGGTGGTTTACTTTTCCATTTCATCTTGGTTTGGCACTAATCAGN 636
                             *      *                   *     *                   

consensus_9414#0      CTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGC 1028
consensus_9414#4      CTTGACCTGGTAAATGGAATCCCCCACATTTATCGTGCTGGTACATCATCAAGATATTGC 658
consensus_9414#1      CTTGACCTGGTAAACCGGACATCTGAACTTGCCCGTGT--ATTTGGTATTGAAATCGTCT 835
consensus_9414#2      TTTATCATGGTCAATGTAAGTTCCACAAGTGATCTTTATTTTATCATGGTGAATGCAATT 726
consensus_9414#3      CCCTTCNTAATTTTTGG---TTTTGGCAATCAACACCACTATCTCTTAATAAGTCTACAG 693
                           * *  *                  *   *       *         *        

consensus_9414#0      TATTTGAGATTTCCTTTGTATTTCCAGTTGAAAACTTTTATCAATTTTGCATCTTCTCCT 1088
consensus_9414#4      TATTTGAGATTTCCTTAAAAA---AAAAAAAAAA-------------------------- 689
consensus_9414#1      C----------------------------------------------------------- 836
consensus_9414#2      CATTTGATGTAAAAAAAAAAAA-------------------------------------- 748
consensus_9414#3      GAATCTCAAGAAATTGAAC----------------------------------------- 712
                                                                                  

consensus_9414#0      TAACAATCTCCTAGCCACGATTTATCACACAGAAATGCAGTTGG 1132
consensus_9414#4      --------------------------------------------
consensus_9414#1      --------------------------------------------
consensus_9414#2      --------------------------------------------
consensus_9414#3      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)