These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9415#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 805 fasta sequence [CATCCAATCCACCGCAAGCCGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC-TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC-TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG-ACGGGCGCACTGCCCTACC-TCAAAGTGAACA-GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT-TGTAATTTT-GTGTATC-TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA-CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTAAAAAAAAAGTCTCCCATTATACCTGTGACTAATAGCATCTGATTTAATTTGCAA] [+] EMBL AU057515 [CATCCAATCCACCGCAAGCCGAAGCGTGA CAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCG NNTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGNGGCGGCGGCGTCG NGATCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAA CGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACCTTTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGCTTATCCAAGATGATCCAAGTTAACAAGAGCGA TANAACAACGTGAACGGGCGCANTGCCCTACCTTCAAAGTGAACAGGGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAA GTCCCAAGTCATACCAAGCAAGCACAAACCAATTATTCATGCCAAAATGTTCAAAA ] [+] EMBL AK066837 [ GCAAGCCGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACT ] [-] EMBL CB679884 [ CGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGC ] [+] EMBL AU057516 [ nTGACGGGGAGGGGGAAGATCGTNCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTAAAAAAAAA ] [+] EMBL CF197333 [ AAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATATCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTATGCAAGGCGTCTCCCATTATACCTGTGACTAATAGCATCTGATTTAATTTGCAA] [+] EMBL CB680981 [ C TCAAAGCGTAAA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAATCTGTAATTTTCCTGTATCGTTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||