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Oryza sativa
cluster # 9415 cluster # 9415       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9415#0 length = 805 sequences # 6  
consensusID : consensus_9415#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 805
fasta sequence 
                              [CATCCAATCCACCGCAAGCCGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC-TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC-TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG-ACGGGCGCACTGCCCTACC-TCAAAGTGAACA-GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT-TGTAATTTT-GTGTATC-TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA-CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTAAAAAAAAAGTCTCCCATTATACCTGTGACTAATAGCATCTGATTTAATTTGCAA]

[+] EMBL AU057515             [CATCCAATCCACCGCAAGCCGAAGCGTGA CAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCG NNTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGNGGCGGCGGCGTCG NGATCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAA CGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACCTTTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGCTTATCCAAGATGATCCAAGTTAACAAGAGCGA TANAACAACGTGAACGGGCGCANTGCCCTACCTTCAAAGTGAACAGGGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAA GTCCCAAGTCATACCAAGCAAGCACAAACCAATTATTCATGCCAAAATGTTCAAAA                                                                                                                                                                           ]
[+] EMBL AK066837             [             GCAAGCCGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACT                                                                                     ]
[-] EMBL CB679884             [                   CGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCCTCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGAAGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGGCCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGTCCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGGCGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGC                                                                                                                                                                                         ]
[+] EMBL AU057516             [                                                                                                                                                                                                                                                                                                                          nTGACGGGGAGGGGGAAGATCGTNCGGCGGCGCGCCGGGAAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTAAAAAAAAA                                              ]
[+] EMBL CF197333             [                                                                                                                                                                                                                                                                                                                                                                 AAGCAGCACC TTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGC TATCCAAGATGATCCAAGTTAACAAGAGCGACTACAACAACGTG ACGGGCGCACTGCCCTACC TCAAAGTGAACA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAAT TGTAATTTT GTGTATC TTCTTTGTATTTCTTTTCTGAATATCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACTATTAAGGAGTAAGAACATGAGTGGTTGACTATGCAAGGCGTCTCCCATTATACCTGTGACTAATAGCATCTGATTTAATTTGCAA]
[+] EMBL CB680981             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C TCAAAGCGTAAA GGAATGCAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAATCTGTAATTTTCCTGTATCGTTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAAGCACAAA CAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTTATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACT                                                                                     ]




>consensus_9415#0
CATCCAATCCACCGCAAGCCGAAGCGTGAGCAAAGTGCCCTCGAGCCATGGCCATGTCCC
TCTCCCTCGCGCGCGTCGCGCTCCCGCCTCTGCTGCAGCAGCAGGGGGGCGCCCCCAGGA
AGCTCCACCCCGGCGCCCTCGCGTTCCCCGCCAAGTCGTTCTTCGGCGCGCCGCTGGCGG
CCGTCGCGGTCTCCCCCGCGTCGGCGGCGGCGGCGTCGCCGCTCCGTCGCAGGCCGTCGT
CCGCCTCCGCCGTCGTCGCGGCGGGGAAGGGGTACAAGATGAAGACCCACAAGGCGTCGG
CGAAGCGGTTCCGGGTGACGGGGAGGGGGAAGATCGTGCGGCGGCGCGCCGGGAAGCAGC
ACCTTCTCAGCAAGAAGAACACCAAGCGCAGGAAGAGGCTATCCAAGATGATCCAAGTTA
ACAAGAGCGACTACAACAACGTGACGGGCGCACTGCCCTACCTCAAAGTGAACAGGAATG
CAGAATGAGATCTCCTAGGTCTTGCAAACATGCTTCTGTTTCGTTTCATCAAATTGTAAT
TTTGTGTATCTTCTTTGTATTTCTTTTCTGAATACCAAGGTCCCAAGTCATACCAAGCAA
GCACAAACAATTATTCATGCCAACATGTTCAAAAATGAGTTGCACTTGCACGAGCTAGTT
ATTTACAAGTCCTTTTTCCCCTTTTGACAAAGAAAATTCCAACTGATAATGAAAGCAACT
ATTAAGGAGTAAGAACATGAGTGGTTGACTAAAAAAAAAGTCTCCCATTATACCTGTGAC
TAATAGCATCTGATTTAATTTGCAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)