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Oryza sativa
cluster # 9420 cluster # 9420       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9420#0 length = 2620 sequences # 6  

consensusID : consensus_9420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2620
fasta sequence
                              [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA-NGGCACCGCGGCACGGGAGGGCAGGGCGCA-NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA-NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAACAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA-TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA]

[+] EMBL C27478               [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU062962             [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK073510             [                                               CAAGGCCCATCTCTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTCTGAGGCGGAGCGGCACCGCGGCACGGGAGGGCAGGGCGCAGCGGCGACGGCGAGGAAGCCAACCGGGCGCGGCAGCAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTGGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAGAATCAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTAC                                  ]
[+] EMBL AU166895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU181743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU058066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tntnTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAATTTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA]


>consensus_9420#0 GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTN TCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTG AGGCGGANGGCACCGCGGCACGGGAGGGCAGGGCGCANGGCGACGGCGAGGAAGCCAACC GGGCGCGGCANAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGG GACTNGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCT CCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCT CGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTC GACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCC ACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGC AGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGAC GATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTC TCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGG ATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTG GAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAG GTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATAC GCAAAAACAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCA GAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATT GTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCC ATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAG GCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAA GCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAAC AACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATC AAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGAT CAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCA AAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTT ATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAAC AAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCC TTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTAT CTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTA AACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGA CAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCT GCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGG AAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTT CATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATG AAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGA ATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAG GAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGA TCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGG TTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCC AAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAA TGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAATTTTAATGTATAAATG CCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGC GAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTG TTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)