These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9420#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2620 fasta sequence [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA-NGGCACCGCGGCACGGGAGGGCAGGGCGCA-NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA-NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAACAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA-TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA] [+] EMBL C27478 [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTA ] [+] EMBL AU062962 [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGG ] [+] EMBL AK073510 [ CAAGGCCCATCTCTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTCTGAGGCGGAGCGGCACCGCGGCACGGGAGGGCAGGGCGCAGCGGCGACGGCGAGGAAGCCAACCGGGCGCGGCAGCAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTGGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAGAATCAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTAC ] [+] EMBL AU166895 [ GCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA ] [+] EMBL AU181743 [ TCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA ] [+] EMBL AU058066 [ tntnTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAATTTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||