cluster # 9420

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Oryza sativa
cluster # 9420 cluster # 9420 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9420#0 length = 2620 sequences # 6
consensusID : consensus_9420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2620
fasta sequence
                              [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA-NGGCACCGCGGCACGGGAGGGCAGGGCGCA-NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA-NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAACAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA-TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA]

[+] EMBL C27478               [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTNGAGCCGGGAGACCCAACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU062962             [GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTNTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTGAGGCGGA NGGCACCGCGGCACGGGAGGGCAGGGCGCA NGGCGACGGCGAGGAAGCCAACCGGGCGCGGCA NAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK073510             [                                               CAAGGCCCATCTCTCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTCTGAGGCGGAGCGGCACCGCGGCACGGGAGGGCAGGGCGCAGCGGCGACGGCGAGGAAGCCAACCGGGCGCGGCAGCAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGGGACTGGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCTCCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCTCGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTCGACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAGAATCAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCAGAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATTGTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCCATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAGGCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAAGCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAACAACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATCAAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGATCAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCAAAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCCTTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTATCTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTAAACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGACAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCTGCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGGAAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTTCATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATGAAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGAATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAGGAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGATCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGGTTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAA TTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTAC                                  ]
[+] EMBL AU166895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU181743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGCAGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGACGATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTCTCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGGATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTGGAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAGGTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATACGCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU058066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tntnTCATACTGTCCAAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAATGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAATTTTTAATGTATAAATGCCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGCGAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTGTTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA]




>consensus_9420#0
GTACTTCCAAAATAAGCAAGCNAAACCTCCGGAACCAGTGTTCGGCCCAAGGCCCATCTN
TCCTCTACGTCCGGCGGCGGCGCATCCCGGCCTCGCGCTCCGGCGGCGGCGGCCAGTNTG
AGGCGGANGGCACCGCGGCACGGGAGGGCAGGGCGCANGGCGACGGCGAGGAAGCCAACC
GGGCGCGGCANAAGGGAGACCGCGTCTTGTCTGCACGGCTCCATTAGCGGCTGGAGGTGG
GACTNGAGCCGGGAGACCCAACTAGCGTCCACCGCCTCTCCGCCACCGCCGCCGCCGCCT
CCCGCAACTTAGGGGGTTTTGCTGCGCCGGCGCGGCTCCAATCCGCTCCGGGGCGGACCT
CGCCGGTCGACGGCCGCCATGGGCTTCGCGCGCGTGGAGCTGCGGTGCCCTAGGGCACTC
GACCCCCGCCCGAGCTGGACCCTCGGCGACGTCCTCACCGAGCTCGACGCGCTCGAGGCC
ACTCGCCGCACCGCGCAGCCCACGCCCCTCAAGCAGCCGCCGGAGTGGGCTAGCAGTGGC
AGCGTGAGGGAGAAGGCCTTTGTGATGCGGGTTGAAGAGGAAGATGACACGGATGAGGAC
GATTACGACAGTGATGGGGAGTCCCGGGCTCTTGTGGCCAAGGCCACTGGAGCAAGGTTC
TCATGCAATGATCTTGAATCCAGTGATGCTGAAGAATCAGAGGATGAAATGGATGGCAGG
ATTGCACCATATCACCTGATGGAGAAACGGAGCCTAGAGAAGAGCATTCTGCTTGAGCTG
GAACGTGAGCATCATCTGAAAGTTCAAGAGGAAGTCAGAAGTAAACTATCTGCATTGGAG
GTATGCCACCAAAGTGAAATCCAGCGAACAGTTTCTGCATTTGCTCGACTACAGAAATAC
GCAAAAACAAGAAAAGAGATAGACAGAAGGCTAGATGTCCACTTCCAGAGAAAAATTGCA
GAAGTACTTGATAAACATTTGTCTATGGTCCAAAGGGATCATGAACAGAAATCGCAAATT
GTGGAACGTAGAATAAGAGATGATGCTGCTCTTGAAGAAGCTAAAAGAAAGGAGCAAGCC
ATGAAGGACGAAAAAATAAGGCAGGAAAGAGCCAAACAAGAAGCAGAGGCCAGACAGAAG
GCAGCTGCAAAGTTAGCAGTGGAAGCACAGAAAGCAGCAGCTGAGGCTGCTGCAAAGGAA
GCAGCAGAAGCTCAGAAAGCAGCAGCTGAGGTTTCCAAATCCAGCCAAAATTCTCAGAAC
AACGTTGCAGGAACAATGAGGGCAAACAAGAGTGAAATTAAATCTGAATTACCAGGGATC
AAAGTCTTTGCTGATCATTCTGCACTGGAAGCAGAATTGCGGAGGCGTGCATTACTTGAT
CAAGTGCCAGCGAACATTCATTCCAGCAAGGAGTTCAGCAGATATGACCGACAAATTGCA
AAATCTATTGGTAAACTTATGCCGACTACTGACAGTGTAAAAGCAAGGGCTGGTGAGCTT
ATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAAC
AAGATTATTTCAATCGTCAAGAGTAGAAATACAAAGGACAAAACATTTGGAAATTTGGCC
TTTGCTTGTGGATATGTCATGCTTCTAGTCACCAGCCAGGTACCAGATGCAATGGATTAT
CTTCTAGCTGAGTTCCACAGAGTTTGCATGTACACAGTTCCAAAGCATCTGCATGCTTTA
AACGCACAAGTACGGAATAGAGATTATTACAGACTGATTGGCTACCAGGAAGAAAATGGA
CAACTCGAGAGCACTGAAAGTTATTTGACATATGTTGCCGCATACGTCAAGCTGTATGCT
GCAATGATTCAGACCGAAATTAGGGGCGTGCGGCATCCACATGGCTTAGCTGAGGGGTGG
AAATGGCTTGCCATGTTCCTTAATACTCTCCCGGCCACCACAGCAACTGCTTGTGCCCTT
CATGCTTTCCTCAAGGTTGCTGGTTTTGCACTTCACAAGAAATACGGATCACAGTTCATG
AAACTTCTAGATGTAATATTGCGGTGCTTCTTACCCGCTTTGAAGGAACAAGGCTCACGA
ATTCAGGCTGAGGCTGCAAGTAATCTACAGAATTATCTGACTGACAAGGTTTACCTTGAG
GAACCAGAAGGCCAGTACCTTGCGCAACAGCTTCTATCTAAAGAGTTGTTCACGTGAGGA
TCAGACACCAGATCAGCATGGCGATGTGGCACTGCACACTGGCCAAGTTTGTCACCGCGG
TTAGCAATGGCTGTTGCCAGATAATGCTCTATGTGTGCAGCAAGACATTTCATACTGTCC
AAATGGAGCAACCTGCACGGTTATATGATGGCAGAGAAGGCCAGAATCGCCCTGAAGAAA
TGTCTTGGATTGCGCCCCCAAGGTCTCCCTTTTTAAGCCACCAATTTTAATGTATAAATG
CCATGTACGAATACTATAGATTAGATGCGATGCAATTTGTTGTACGCCTGTATTGAGGGC
GAGCCTGTAATTTATTCGAAGTAAATGTTACTCTGGACATGTGCTGTCTTATATAATCTG
TTGTACGCTTGTTGCCAAAAACAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case