Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9430 cluster # 9430       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9430#0 length = 1814 sequences # 5  
consensus_9430#1 length = 887 sequences # 1  

consensusID : consensus_9430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1814
fasta sequence
                              [TCTTTCCCCTTCCTCCTCGGCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGTCGATTCCGATTGCGATTGAAGGTCTGTTCTTCTATTTATTATAGTATATATAGATCCAGTCGGCTGCTGCGTTGAAAACCAGGAGAGGATCAGATCATGGCGCAAATGGGCGTCATGGACGCTTCCCTGTGTCCTCCTTTCCACGGCCGGTCCGTCGACAAGGGGACGCGGCGCAGGCCAAGATGGGTACTCCTCGACAAGCTCGCCTACTTCGCCGGCGCCGACGTCCGCAACGCCACCACTGCTACTTCCAAAACAAGGGAGGGCCATGAAATCCAGGTGACCCTGTGCACCGCCGCCCAGCCGCAGCTCGTCTCCTACGTGTGCGTCCACTCTCCCACCCTCAATCCTGCATCCGATGACTACGCCATGGAGCCCCAGATCATCGCCGCACACGATGACCTCCTCCTCATCCGCCTCATCCTCGGCAGAGGTAACAGGTTTACTGTATCCCTCGCCGACTACTTCGTTTACCAGGCCTCCATTGCTGATGATATCCCGCCGTCTCTCACGCGCATCACCCATCCCGGCCCTATGATCACCTTCACTAACCACGAGGTCGCCATCCTGCACTACATCCCTGAGGACACCCACCACCACCCGTATAGGCCACCAGGGGAATACAAGCTCCATCTCTACCACTCCCACACTCAGCAATGGACCACCACCCACTTCAACCTTGCGGCAACAATGCCAGATCTCTCTCCCTTCCACCATCGCACAACCAACGTCATCAACCTCACTCACCAATCTCCTGGTCTCATGGCTTTCGTCGACCTCTGGCAGGGCCTCTTGCTCATCAATGTGCTTGACAAGGTACAGCCTGCCGCACCTCGCTACATCCCATTGCCACCACCGCTCAAGCAGGGTAAAGTCATTTCCGGCAGAGTCGACCCAACAGATGTTCGTGACATTGCCGTCGACGCAAAAGGTCACATCAACTTTGTTGAGCTGGAGGTCGATGCTATTCAACACGAGTCGGATAGAACCGGTTACATCTCTCAGGGCTGGACGGTTGCCAAATGGAGCTGCAGTAATACTGAATCCGACGATTGCTGCTGGCACATGGACTGCAAGCTCAACGCTTCTGACATCTCTCATCTGATGCCTCCTGAGCTACCCAACTACTGTCACCCAACCCCAACCTTGGAGAGACTCCACATAGGTCATCCCTTGCTCAGTTTGGACAACAATGGCGATGTTGTTTACTTCATGGCCAAGGTCGACCACCGTGATTACAAGGCATGGGTCATTCCTGTTGACATGAGGAAAAGGCTCATACATGAACCAGCTGTTTTTGAGGGTGCTCCGCGTACTCTTGGCATAGGTTCCACCTTCATACAAACCACCATCTCCAACTATCCACAACCTGCTCCA-GGTAAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGTAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGTTTTATCAAAAAAAAAAAA]

[+] EMBL AK065613             [TCTTTCCCCTTCCTCCTCGGCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGTCGATTCCGATTGCGATTGAAGGTCTGTTCTTCTATTTATTATAGTATATATAGATCCAGTCGGCTGCTGCGTTGAAAACCAGGAGAGGATCAGATCATGGCGCAAATGGGCGTCATGGACGCTTCCCTGTGTCCTCCTTTCCACGGCCGGTCCGTCGACAAGGGGACGCGGCGCAGGCCAAGATGGGTACTCCTCGACAAGCTCGCCTACTTCGCCGGCGCCGACGTCCGCAACGCCACCACTGCTACTTCCAAAACAAGGGAGGGCCATGAAATCCAGGTGACCCTGTGCACCGCCGCCCAGCCGCAGCTCGTCTCCTACGTGTGCGTCCACTCTCCCACCCTCAATCCTGCATCCGATGACTACGCCATGGAGCCCCAGATCATCGCCGCACACGATGACCTCCTCCTCATCCGCCTCATCCTCGGCAGAGGTAACAGGTTTACTGTATCCCTCGCCGACTACTTCGTTTACCAGGCCTCCATTGCTGATGATATCCCGCCGTCTCTCACGCGCATCACCCATCCCGGCCCTATGATCACCTTCACTAACCACGAGGTCGCCATCCTGCACTACATCCCTGAGGACACCCACCACCACCCGTATAGGCCACCAGGGGAATACAAGCTCCATCTCTACCACTCCCACACTCAGCAATGGACCACCACCCACTTCAACCTTGCGGCAACAATGCCAGATCTCTCTCCCTTCCACCATCGCACAACCAACGTCATCAACCTCACTCACCAATCTCCTGGTCTCATGGCTTTCGTCGACCTCTGGCAGGGCCTCTTGCTCATCAATGTGCTTGACAAGGTACAGCCTGCCGCACCTCGCTACATCCCATTGCCACCACCGCTCAAGCAGGGTAAAGTCATTTCCGGCAGAGTCGACCCAACAGATGTTCGTGACATTGCCGTCGACGCAAAAGGTCACATCAACTTTGTTGAGCTGGAGGTCGATGCTATTCAACACGAGTCGGATAGAACCGGTTACATCTCTCAGGGCTGGACGGTTGCCAAATGGAGCTGCAGTAATACTGAATCCGACGATTGCTGCTGGCACATGGACTGCAAGCTCAACGCTTCTGACATCTCTCATCTGATGCCTCCTGAGCTACCCAACTACTGTCACCCAACCCCAACCTTGGAGAGACTCCACATAGGTCATCCCTTGCTCAGTTTGGACAACAATGGCGATGTTGTTTACTTCATGGCCAAGGTCGACCACCGTGATTACAAGGCATGGGTCATTCCTGTTGACATGAGGAAAAGGCTCATACATGAACCAGCTGTTTTTGAGGGTGCTCCGCGTACTCTTGGCATAGGTTCCACCTTCATACAAACCACCATCTCCAACTATCCACAACCTGCTCCA GGTAAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGG AGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGTAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACAC                      ]
[+] EMBL OSC26921             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCACCAATCTCCTGGTCTCATGGCTTTCGTCGACCTCTGGCAGGGCCTCTTGCTCATCAATGTGCTTGACAAGGTACAGCCTGCCGCACCTCGCTACATCCCATTGCCACCACCGCTCAAGCAGGGTAAAGTCATTTCCGGCAGAGTCGACCCAACAGATGTTCGTGACATTGCCGTCGACGCAAAAGGTCACATCAACTTTGTTGAGCTGGAGGTCGATGCTATTCAACACGAGTNGGATAGAACCGGTTACATCTCTCAGGGCTGGACGGTTGCCAAATGGAGCTGCAGTAATACTGAATCCGACGATTGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA758167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATACATGAACCAGCTGTTTTTGAGGGTGCTCCGCGTACTCTTGGCATAGGTTCCACCTTCATACAAACCACCATCTCCAACTATCCACAACCTGCTCCAGGGTAAAAGGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCG                                                                                                                                                                                                                                                  ]
[+] EMBL AU063152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCTGCTCCA GGTAAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTAGTGCTTGTATGTGTAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTNCTATCTATGTGGTACACTTGTTTTATCAAAAAAAAAAAA]
[+] EMBL C97365               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCA GGTAAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGTAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGTTTTATCAAAAAAAAAA  ]


>consensus_9430#0 TCTTTCCCCTTCCTCCTCGGCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGT CGATTCCGATTGCGATTGAAGGTCTGTTCTTCTATTTATTATAGTATATATAGATCCAGT CGGCTGCTGCGTTGAAAACCAGGAGAGGATCAGATCATGGCGCAAATGGGCGTCATGGAC GCTTCCCTGTGTCCTCCTTTCCACGGCCGGTCCGTCGACAAGGGGACGCGGCGCAGGCCA AGATGGGTACTCCTCGACAAGCTCGCCTACTTCGCCGGCGCCGACGTCCGCAACGCCACC ACTGCTACTTCCAAAACAAGGGAGGGCCATGAAATCCAGGTGACCCTGTGCACCGCCGCC CAGCCGCAGCTCGTCTCCTACGTGTGCGTCCACTCTCCCACCCTCAATCCTGCATCCGAT GACTACGCCATGGAGCCCCAGATCATCGCCGCACACGATGACCTCCTCCTCATCCGCCTC ATCCTCGGCAGAGGTAACAGGTTTACTGTATCCCTCGCCGACTACTTCGTTTACCAGGCC TCCATTGCTGATGATATCCCGCCGTCTCTCACGCGCATCACCCATCCCGGCCCTATGATC ACCTTCACTAACCACGAGGTCGCCATCCTGCACTACATCCCTGAGGACACCCACCACCAC CCGTATAGGCCACCAGGGGAATACAAGCTCCATCTCTACCACTCCCACACTCAGCAATGG ACCACCACCCACTTCAACCTTGCGGCAACAATGCCAGATCTCTCTCCCTTCCACCATCGC ACAACCAACGTCATCAACCTCACTCACCAATCTCCTGGTCTCATGGCTTTCGTCGACCTC TGGCAGGGCCTCTTGCTCATCAATGTGCTTGACAAGGTACAGCCTGCCGCACCTCGCTAC ATCCCATTGCCACCACCGCTCAAGCAGGGTAAAGTCATTTCCGGCAGAGTCGACCCAACA GATGTTCGTGACATTGCCGTCGACGCAAAAGGTCACATCAACTTTGTTGAGCTGGAGGTC GATGCTATTCAACACGAGTCGGATAGAACCGGTTACATCTCTCAGGGCTGGACGGTTGCC AAATGGAGCTGCAGTAATACTGAATCCGACGATTGCTGCTGGCACATGGACTGCAAGCTC AACGCTTCTGACATCTCTCATCTGATGCCTCCTGAGCTACCCAACTACTGTCACCCAACC CCAACCTTGGAGAGACTCCACATAGGTCATCCCTTGCTCAGTTTGGACAACAATGGCGAT GTTGTTTACTTCATGGCCAAGGTCGACCACCGTGATTACAAGGCATGGGTCATTCCTGTT GACATGAGGAAAAGGCTCATACATGAACCAGCTGTTTTTGAGGGTGCTCCGCGTACTCTT GGCATAGGTTCCACCTTCATACAAACCACCATCTCCAACTATCCACAACCTGCTCCAGGT AAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCC GAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAA CAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAA TAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCG TATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGTAAGGGAC GACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGTTTTA TCAAAAAAAAAAAA



consensusID : consensus_9430#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 887
fasta sequence
                              [GCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGTCGATTCCGATTGCGATTGAAGGTAAAAGGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTCTACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGCAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGTTTTATCACTCTGCTGAGTGTGTTCGGGAAAAAAAAAAAAAAAAAAAAGTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAATTTTAGGGGGGGGCCCCGTCCCCCCAAATTGCTCCTCTATGGGTTATTGGCTTGTGACCCCCCCCCCCCTTGGCCCTCGTTATTACAAACCACCGAAACCGGGGAAAACCCCCTCTCTGACCCCCCCTTAATTACCACATTCCGTCCTCCCCCCCCCTCNTGCCATATCGCCTGTTTTGTCTTAAAACGCCCCTTCCTTGTCCTCCCTCACCCCCCTGTTTTCTGTTCATCATGGTAAAGGGTGCCGCCCCAATTATAATAACCCTATTACCCTCTGACGGCTATAGAATCCTATCAAACTACAATCTCACACCCTTGCTTCAAAAACACTTCTCTTGGCAGACTTATCTCTATTACCGGCCTCTATCTCA]

[+] EMBL CA757889             [GCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGTCGATTCCGATTGCGATTGAAGGTAAAAGGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTCTACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGATCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGCAAGGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGTTTTATCACTCTGCTGAGTGTGTTCGGGAAAAAAAAAAAAAAAAAAAAGTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAATTTTAGGGGGGGGCCCCGTCCCCCCAAATTGCTCCTCTATGGGTTATTGGCTTGTGACCCCCCCCCCCCTTGGCCCTCGTTATTACAAACCACCGAAACCGGGGAAAACCCCCTCTCTGACCCCCCCTTAATTACCACATTCCGTCCTCCCCCCCCCTCNTGCCATATCGCCTGTTTTGTCTTAAAACGCCCCTTCCTTGTCCTCCCTCACCCCCCTGTTTTCTGTTCATCATGGTAAAGGGTGCCGCCCCAATTATAATAACCCTATTACCCTCTGACGGCTATAGAATCCTATCAAACTACAATCTCACACCCTTGCTTCAAAAACACTTCTCTTGGCAGACTTATCTCTATTACCGGCCTCTATCTCA]


>consensus_9430#1 GCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGTCGATTCCGATTGCGATTGA AGGTAAAAGGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGAA GTCCGAAACTCCCTATTCTACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGCA AAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTATT ATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGAT CCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGCAAG GGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTGT TTTATCACTCTGCTGAGTGTGTTCGGGAAAAAAAAAAAAAAAAAAAAGTAAATGAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAATTTTAGGGGGGGGCCCCGTCCCCC CAAATTGCTCCTCTATGGGTTATTGGCTTGTGACCCCCCCCCCCCTTGGCCCTCGTTATT ACAAACCACCGAAACCGGGGAAAACCCCCTCTCTGACCCCCCCTTAATTACCACATTCCG TCCTCCCCCCCCCTCNTGCCATATCGCCTGTTTTGTCTTAAAACGCCCCTTCCTTGTCCT CCCTCACCCCCCTGTTTTCTGTTCATCATGGTAAAGGGTGCCGCCCCAATTATAATAACC CTATTACCCTCTGACGGCTATAGAATCCTATCAAACTACAATCTCACACCCTTGCTTCAA AAACACTTCTCTTGGCAGACTTATCTCTATTACCGGCCTCTATCTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9430#0      TCTTTCCCCTTCCTCCTCGGCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGT 60
consensus_9430#1      -------------------GCCTCGGCGGGCGGCCTCCGATACCGATACGCCGTCGGAGT 41
                                         *****************************************

consensus_9430#0      CGATTCCGATTGCGATTGAAGGTCTGTTCTTCTATTTATTATAGTATATATAGATCCAGT 120
consensus_9430#1      CGATTCCGATTGCGATTGAAGGTAAAAGGAGAAAACAGAAACAGCCTG---GGATGTTGC 98
                      ***********************          *      * **  *     ***   * 

consensus_9430#0      CGGCTGCTGCGTTGAAAACCAGGAGAGGATCAGATCATGGCGCAAATGGGCGTCATGGAC 180
consensus_9430#1      TGGGATCCTCAAGCAAAAGGAAGTCCGAAACTCCCTATTCTACAAAT--GTGGTGCTGCC 156
                       **   *  *    ****  * *   * * *     **    *****  * *     * *

consensus_9430#0      GCTTCCC-TGTGTCCTCCTTTCCACGGCCGGTCCGTCGACAAGGGGACGCGGCGCAGGCC 239
consensus_9430#1      ACTGCCAACGAGGCACGGTGTGCAAAAACAACCGGATG-CGGAAGGAGGTAGCATGG--- 212
                       ** **   * * *    * * **    *   * *  * *    *** *  **   *   

consensus_9430#0      AAGATGGGTACTCCT-CGACAAGCTCGCCTACTTCGCCGGCGCCGACGTCCGCAACGCCA 298
consensus_9430#1      AAGCTGAATTTTCAGATAATATGTTATTATAATAAGCTGGGATATGAGTA-ATAGTGGTA 271
                      *** **  *  **     * * * *    ** *  ** **       **    *  *  *

consensus_9430#0      CCACTGCTACTTCCAAAACAAGGGAGGGCCATGAAATCCAGGTGACCCTGTGCACCGCCG 358
consensus_9430#1      ATTATCATATTTTATTGATATAGTGTGATCCCGTA-TCAAGA-----CTATGATCCCTCG 325
                          *  ** **     * *  *   *  *  * * ** **      ** **  **  **

consensus_9430#0      CCCAGCCGCAGCTCGTCTCCTACGTGTGCGTCCACTCTCCCACCCTCAATCCTGCATCCG 418
consensus_9430#1      GTTATTCTCT-CCTATGTCGTGCTTGTATGTGCAAGGGACGACCTGAA----TGAACTCA 380
                         *  * *  *   * ** * * ***  ** **     * ***   *    ** *  * 

consensus_9430#0      ATGACTACGCCATGGAGCCCCAGATCATCGCCGCACACGATGACCTCCTCCTCATCCGCC 478
consensus_9430#1      GTTCAGACATTTTTCTGTCCT--ATCTATGTGGTACACT-TGTTTTATCACTCTGCTGAG 437
                       *    **    *   * **   ***   *  * ****  **   *    ***  * *  

consensus_9430#0      TCATCCTCGGCAGAGGTAACAGGTTTACTGTATCCCTCGCCGACTACTTCGTTTACCAGG 538
consensus_9430#1      T-GTGTTCGGGAAAAAAAAAAAAAAAAAAAAGTAAATGAAAAAAAA--------AAAAAA 488
                      *  *  **** * *   ** *     *     *   *     *  *        *  *  

consensus_9430#0      CCTCCATTGCTGATGATATCCCGCCGTCTCTCACGCGCATCACCCATCCCGGCCCTATGA 598
consensus_9430#1      AAAAAAAAAAAAAAAAAAAAAAAATAAATTTTAGGGGGGGGCCCCGTCCC--CCCAAATT 546
                           *      *  * *          * * * * *     *** ****  *** *   

consensus_9430#0      TCACCTTCACTAACCACGAGGTCGCCATCCTGCACTACATCCCTGAGGACACCCACCACC 658
consensus_9430#1      GCTCCTCTATGGGTTATTGGCTTGTGACCCCCCCCC---CCCTTGGCCCTCGTTATTACA 603
                       * ***  *      *   * * *  * **  * *     ** **         *  ** 

consensus_9430#0      ACCCGTATAGGCCACCAGGGGAATACAAGCTCCATCTCTACCACTCCCACACTCAGCAAT 718
consensus_9430#1      AACCACCGAAACC----GGGGAA----AACCCCCTCTCTGACCCCCCCTTAATTACCACA 655
                      * **    *  **    ******    * * ** *****  * * ***  * * * **  

consensus_9430#0      GGACCACCACCCACTTCAACCTTGCGGCAACAATGCCAGATCTCTCTCCCTTCCACCATC 778
consensus_9430#1      ----TTCCGTCCTCCCCCCCCCTCNTGCCATATCGCCTGTTTTGTCTTAAAACGCCCCTT 711
                            **  ** *  *  ** *   ** * *  *** * * * ***     *  ** * 

consensus_9430#0      GCACAACCAACGTCATCAACCTCACTCACCAATCTCCTGGTCTCATGGCTTTCGTCGACC 838
consensus_9430#1      CCTTGTCCTCCCTCACCCCCCT-GTTTTCTGTTCATCATGGTAAAGGGTGCCGCCCCAAT 770
                       *    **  * *** *  ***   *  *   **  *  *    * **       * *  

consensus_9430#0      TCTGGCAGGGCCTCTTGCTCATCAATGTGCTTGACAAGGTA-CAGCCTGCCGCACCTCGC 897
consensus_9430#1      TATAATAAC-CCTATTACCCTCTGACGGCTATAGAATCCTATCAAACTACA--ATCTCAC 827
                      * *   *   *** ** * *    * *    *   *   ** **  ** *   * *** *

consensus_9430#0      TACATCCCATTGCCACCACCGCTCA-AGCAGGGTAAAGTC-ATTTCCGGCAGAGTCGACC 955
consensus_9430#1      ACCCTTGCTTCAAAAACACTTCTCTTGGCAGACTTATCTCTATTACCGGCC---TCTATC 884
                        * *  * *    * ***  ***   ****  * *  ** *** *****    ** * *

consensus_9430#0      CAACAGATGTTCGTGACATTGCCGTCGACGCAAAAGGTCACATCAACTTTGTTGAGCTGG 1015
consensus_9430#1      TCA--------------------------------------------------------- 887
                        *                                                         

consensus_9430#0      AGGTCGATGCTATTCAACACGAGTCGGATAGAACCGGTTACATCTCTCAGGGCTGGACGG 1075
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      TTGCCAAATGGAGCTGCAGTAATACTGAATCCGACGATTGCTGCTGGCACATGGACTGCA 1135
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      AGCTCAACGCTTCTGACATCTCTCATCTGATGCCTCCTGAGCTACCCAACTACTGTCACC 1195
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      CAACCCCAACCTTGGAGAGACTCCACATAGGTCATCCCTTGCTCAGTTTGGACAACAATG 1255
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      GCGATGTTGTTTACTTCATGGCCAAGGTCGACCACCGTGATTACAAGGCATGGGTCATTC 1315
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      CTGTTGACATGAGGAAAAGGCTCATACATGAACCAGCTGTTTTTGAGGGTGCTCCGCGTA 1375
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      CTCTTGGCATAGGTTCCACCTTCATACAAACCACCATCTCCAACTATCCACAACCTGCTC 1435
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      CAGGTAAAAAGAGAAAACAGAAACAGCCTGGGATGTTGCTGGGATCCTCAAGCAAAAGGA 1495
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      AGTCCGAAACTCCCTATTTGACAAATGTGGTGCTGCCACTGCCAACGAGGCACGGTGTGC 1555
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      AAAAACAACCGGATGCGGAAGGAGGTAGCATGGAAGCTGAATTTTCAGATAATATGTTAT 1615
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      TATAATAAGCTGGGATATGAGTAATAGTGGTAATTATCATATTTTATTGATATAGTGTGA 1675
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      TCCCGTATCAAGACTATGATCCCTCGGTTATTCTCTCCTATGTCGTGCTTGTATGTGTAA 1735
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      GGGACGACCTGAATGAACTCAGTTCAGACATTTTTCTGTCCTATCTATGTGGTACACTTG 1795
consensus_9430#1      ------------------------------------------------------------
                                                                                  

consensus_9430#0      TTTTATCAAAAAAAAAAAA 1814
consensus_9430#1      -------------------
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)