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Oryza sativa
cluster # 9438 cluster # 9438       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9438#0 length = 1765 sequences # 3  
consensus_9438#1 length = 1293 sequences # 2  
consensus_9438#2 length = 440 sequences # 1  

consensusID : consensus_9438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1765
fasta sequence
                              [CCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGTGAGCCCCATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGAAGCTGGCGAACGAGCTTCTCATGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAACACGAAAAAGGAAAGCGGAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAACCAAAAACCAAGTTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCAACACAGTGATACCTTAAGCTCCCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATAATTTGGGGGCCAGTTTTTCCTGTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCCACGTTGGTGCCAGGTTGGAGGCTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACAATTGTTGTATCCAAAAGCCATGTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGGGCCTAGGTAGGAAACCTGCCGTGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGATAAGGAAATGTTGTAGGGACATGTTTTTCTTGTATGTGGGTTTGATCCCTTTTATTATCTAAGACATGCCATTTCTGATGGTGAAAAAANAAAAAAAAAAAAAAAA]

[+] EMBL AK101317             [CCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGTGAGCCCCATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGAAGCTGGCGAACGAGCTTCTCATGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAACACGAAAAAGGAAAGCGGAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAACCAAAAACCAAGTTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCAACACAGTGATACCTTAAGCTCCCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATAATTTGGGGGCCAGTTTTTCCTGTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCCACGTTGGTGCCAGGTTGGAGGCTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACAATTGTTGTATCCAAAAGCCATGTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGGGCCTAGGTAGGAAACCTGCCGTGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGATAAGGAAATGTTGTAGGGACATGTTTTTCTTGTATGTGGGTTTGATCCCTTTTATTATCTAAGACATGCCATT                                 ]
[+] EMBL BE530930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAAGCGGAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAACCAAAAACCAAGTTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCAACACAGTGATACCTTCAGCTCCCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATAATTTGGGGGCCAGTTTTTCCTGTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCCACGTTGGTGCCAGGTTGGAGGCTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACAATTGTTGTATCCAAAAGCCATGTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGGGCTTANGTAGGAAACCTGCCGTGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGATAANGAAAT                                                                                                 ]
[+] EMBL AU094800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTGTTGTATCCAAANGCCATGTTGGNANTCTTTTCAGGAGTGTGNTTTTTCTAGTATGGGCCTAGGTAGGAAACCTGCNGTNTAAGATTAGCTCCNCTCNTTGTTTTCTCTTTGTAAGATAAGGAAATGTTGTAGGGAAATGTTTTTCTTGTATGTGGGTTTGANCCCTTTTATTATCTAAGACATGCCATTTCTGATGGTGAAAAAANAAAAAAAAAAAAAAAA]


>consensus_9438#0 CCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCG TGCTCCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGG CGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCACCCACC GCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCT CGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCTGCGCC GATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGTCTGTC CTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAAC TCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGA CAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAAC TGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGC CAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTG TTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTAT ACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGA TCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGC ACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACCAAATT TGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAAATTGA TAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAATTTTC ATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATAGTGAA TCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGTGAGCCC CATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGAAGCTGGCGAACGAGCTTCTCA TGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAACACGAAAAAGGAAAGCGGAAAG CCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAACCAAAAACCAAGTTAGA GGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCAACACAGTGATACCTTAAGCTC CCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATAATTTGGGGGCCAGTTTTTCCT GTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCCACGTTGGTGCCAGGTTGGAGG CTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACAATTGTTGTATCCAAAAGCCAT GTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGGGCCTAGGTAGGAAACCTGCCG TGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGATAAGGAAATGTTGTAGGGACA TGTTTTTCTTGTATGTGGGTTTGATCCCTTTTATTATCTAAGACATGCCATTTCTGATGG TGAAAAAANAAAAAAAAAAAAAAAA



consensusID : consensus_9438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1293
fasta sequence
                              [ACCCCTGTCTGTGCCACCCATCTCTCCAGATTAGGACCAGTGAATTACATTTTTGCCCGATCCCGTCGCGAACTCCGTCCCCCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGGTGTGTAATGGCGTATAAATGAACTCATCATAACTAGTTAGCACATAATCAGTATTAATTCTCAATAAAAACTTTCCATTTG]

[+] EMBL AK107282             [ACCCCTGTCTGTGCCACCCATCTCTCCAGATTAGGACCAGTGAATTACATTTTTGCCCGATCCCGTCGCGAACTCCGTCCCCCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGGTGTGTAATGGCGTATAAATGAACTCATCATAACTAGTTAGCACATAATCAGTATTAATTCTCAATAAAAACTTTCCATTTG]
[+] EMBL CA997994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAAATAGAGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACT                                                                                                                                                                                                                                                                                                        ]


>consensus_9438#1 ACCCCTGTCTGTGCCACCCATCTCTCCAGATTAGGACCAGTGAATTACATTTTTGCCCGA TCCCGTCGCGAACTCCGTCCCCCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACAC CACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCC GCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCC CGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTT CGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCT CGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCT CCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCC TATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATAC TGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGT TCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACC ATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCAC TGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGA AATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACC TGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTAT TGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGG CGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAG GTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGT AACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAA GCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAA GCCGGAAGAAGGTGTGTAATGGCGTATAAATGAACTCATCATAACTAGTTAGCACATAAT CAGTATTAATTCTCAATAAAAACTTTCCATTTG



consensusID : consensus_9438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence
                              [TCCCCCCTTTNCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCACGGTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCGAAGGGCGGNCCCGAGGCTCGCGGCCCGCACCCNNNCACCCACCGCCGCAAACNTCGTCCGCACCCGCGNAGCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTTAGTTCGCTGNCCCGTCGCTGCGCCGATTTCATNCCGCGAGCTGAGAGGGGGAGGGCGCCGCTNCGTCGTCGTCGTCTGTCTGTTGCTTCGCGNATCCCGGAAAATNTTGTAAAAGCTATGGAAATTTAAAATTCTTAACATAAAAAGTCCGAATATGTGTAAAAA]

[+] EMBL AU064512             [TCCCCCCTTTNCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCACGGTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCGAAGGGCGGNCCCGAGGCTCGCGGCCCGCACCCNNNCACCCACCGCCGCAAACNTCGTCCGCACCCGCGNAGCTCTCCCTCTCTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTTAGTTCGCTGNCCCGTCGCTGCGCCGATTTCATNCCGCGAGCTGAGAGGGGGAGGGCGCCGCTNCGTCGTCGTCGTCTGTCTGTTGCTTCGCGNATCCCGGAAAATNTTGTAAAAGCTATGGAAATTTAAAATTCTTAACATAAAAAGTCCGAATATGTGTAAAAA]


>consensus_9438#2 TCCCCCCTTTNCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTCC CCCGTGCTCCTCCTCCTCACGGTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATCT CCGGCGAGCCGGCGTCGCGAAGGGCGGNCCCGAGGCTCGCGGCCCGCACCCNNNCACCCA CCGCCGCAAACNTCGTCCGCACCCGCGNAGCTCTCCCTCTCTTCGTTCGTCGTCGGTGCC TCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTTAGTTCGCTGNCCCGTCGCTGCGCCG ATTTCATNCCGCGAGCTGAGAGGGGGAGGGCGCCGCTNCGTCGTCGTCGTCTGTCTGTTG CTTCGCGNATCCCGGAAAATNTTGTAAAAGCTATGGAAATTTAAAATTCTTAACATAAAA AGTCCGAATATGTGTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9438#1      ACCCCTGTCTGTGCCACCCATCTCTCCAGATTAGGACCAGTGAATTACATTTTTGCCCGA 60
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ------------------------------------------------------------
                                                                                  

consensus_9438#1      TCCCGTCGCGAACTCCGTCCCCCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACAC 120
consensus_9438#2      -----------------TCCCCCCTTTNCCCCTCTTCTTTACCGATGCTGCCAGGCACAC 43
consensus_9438#0      ---------------------CCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACAC 39
                                           ****** ********************************

consensus_9438#1      CACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCC---TCCTCCTCGTCGTGGTGCGAC 177
consensus_9438#2      CACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCACGGTCCTCCTCGTCGTGGTGCGAC 103
consensus_9438#0      CACCGTAAGAGTCGTCCCCCGTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGAC 99
                      ***********************************    *********************

consensus_9438#1      CCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCG 237
consensus_9438#2      CCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCGAAGGGCGGN--CCCGAGGCTCGCG 161
consensus_9438#0      CCCGCGCCAAGCAATCTCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCG 159
                      ***********************************    *****   *************

consensus_9438#1      GCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCT 297
consensus_9438#2      GCCCGCACCCNNNCACCCACCGCCGCAAACNTCGTCCGCACCCGCGNAGC-TCTCCCTCT 220
consensus_9438#0      GCCCGCACCCCCCCACCCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCT 219
                      **********   ***************** *************** *** *********

consensus_9438#1      CTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTC 357
consensus_9438#2      CTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTTAGTTC 280
consensus_9438#0      CTTCGTTCGTCGTCGGTGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTC 279
                      ****************************************************** *****

consensus_9438#1      GCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCG 417
consensus_9438#2      GCT-GNCCCGTCGC-TGCGCCGATTTCA--TNCCGCGAGCTGAG-AGGGGGAGGGCGCCG 335
consensus_9438#0      GCTCGCCCCGTCGCCTGCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCG 339
                      *** * ******** ********* **     ************ ***************

consensus_9438#1      CCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAA 477
consensus_9438#2      C-TNCGTCGTCGTCGTCTGTC-TGTTGCTTCG--CGNATCCC-GGAAAATNTTGTAAAAG 390
consensus_9438#0      CCTCCGTCGTCGTCGTCTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAA 399
                      * * ***************** ** ******   ** ***** ** **** ******** 

consensus_9438#1      GCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGA 537
consensus_9438#2      --CTATGG-AAATTTAAAA--TTCTTAAC-AT--AAAAAGTCCGAATATGTGTAAAAA-- 440
consensus_9438#0      GCCTATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGA 459
                        ****** ***** ****  * ** *** **  ** ******  *  * ***    *  

consensus_9438#1      TACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAAT 597
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TACTGATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAAT 519
                                                                                  

consensus_9438#1      GGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTC 657
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      GGTTCTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTC 579
                                                                                  

consensus_9438#1      ACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATT 717
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ACCATCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATT 639
                                                                                  

consensus_9438#1      CACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGA 777
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      CACTGTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGA 699
                                                                                  

consensus_9438#1      AGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAG 837
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      AGAAATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAG 759
                                                                                  

consensus_9438#1      ACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGC 897
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ACCTGATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGC 819
                                                                                  

consensus_9438#1      TATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAG 957
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TATTGACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAG 879
                                                                                  

consensus_9438#1      AGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACT 1017
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      AGGCGAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACT 939
                                                                                  

consensus_9438#1      GAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGG 1077
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      GAGGTCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGG 999
                                                                                  

consensus_9438#1      TGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAA 1137
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TGTAACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAA 1059
                                                                                  

consensus_9438#1      AAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGT 1197
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      AAAGCGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGT 1119
                                                                                  

consensus_9438#1      TAAGCCGGAAGAAG-GTGTGTAATGGCGTATAAATGAAC-TCATCATAACTAGTTAGCAC 1255
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TAAGCCGGAAGAAGTGAGCCCCATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGA 1179
                                                                                  

consensus_9438#1      ATAATCAGTATTAATTCTCAATAAAAACTTTCCATTTG---------------------- 1293
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      AGCTGGCGAACGAGCTTCTCATGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAAC 1239
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ACGAAAAAGGAAAGCGGAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGA 1299
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TGAACCAAAAACCAAGTTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCA 1359
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ACACAGTGATACCTTAAGCTCCCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATA 1419
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ATTTGGGGGCCAGTTTTTCCTGTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCC 1479
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ACGTTGGTGCCAGGTTGGAGGCTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACA 1539
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      ATTGTTGTATCCAAAAGCCATGTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGG 1599
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      GCCTAGGTAGGAAACCTGCCGTGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGA 1659
                                                                                  

consensus_9438#1      ------------------------------------------------------------
consensus_9438#2      ------------------------------------------------------------
consensus_9438#0      TAAGGAAATGTTGTAGGGACATGTTTTTCTTGTATGTGGGTTTGATCCCTTTTATTATCT 1719
                                                                                  

consensus_9438#1      ----------------------------------------------
consensus_9438#2      ----------------------------------------------
consensus_9438#0      AAGACATGCCATTTCTGATGGTGAAAAAANAAAAAAAAAAAAAAAA 1765
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)