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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9445 cluster # 9445       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9445#0 length = 438 sequences # 6  

consensusID : consensus_9445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 438
fasta sequence
                              [TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC-TTGCACGCTCGCGTCCGT-GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGTTCGGGTCGAA-TTCGCCGACGCCG-CG-CAAGATGCCGGGGGT]

[+] EMBL AU066081             [TANAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGNTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGCTTTGCACGCTCGCGTCCGT GCACAGCATGGAGGTGGTTNCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTTGACCACTCGCCGAACCCGTCCTGGGTCGGGTCGAA TTCGCCGACGCCG CG CAAGATGCCGGGGGT]
[+] EMBL OSS2584A             [TAGAAG AAAAANTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGT TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGT                                           ]
[+] EMBL AU066096             [TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCGTCCGT GCACAGCAT                                                                                                                           ]
[+] EMBL OSS3650A             [nAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCNACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGACTGGACCACTCGNCGAACCCGTCCTGGTTCGGGTCGAACTNCGCCGACGCCGCCGCCAAGATG        ]
[-] EMBL OSC6351              [ AGAAG AAAAATTTTAATCGTATATATATTTATGGCATGTAAAGNGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCNTCCGT GCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCCGCTCGCTGGAC                                                                      ]
[-] EMBL AU097303             [ AGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTGGCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGCGTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGGCACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAGCGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGC TTGCACGCTCGCGTCCGTGGCACAGCATGGANGTGGTTGCGGTGGTTGCAGTACTCGTC                                                                                            ]


>consensus_9445#0 TAGAAGAAAAAATTTTAATCGTATATATATTTATGGCATGTAAAGAGCCTCCAATCCTTG GCAATCCACGCTCCAATCATGATCAGGAGCGCCGATCATGCACTCATGGAGGCTCATGGC GTCGTCGGGAAACGAATCCAACGAGTCGTACTTGGGCTCCTCCCATGTCGACAAGCTCGG CACGATCGAGCACCACGACGACAGGCTGCCGGCGCCGGCGACGTCCGTGGGCAAACCTAG CGAGTCGAAGCAGCTCTGATCCATGGCGAAGTTGAGCTCGCCGAGCGCGGCTTGCACGCT CGCGTCCGTGCACAGCATGGAGGTGGTTGCGGTGGTTGCAGTACTCGTCGGGTCGTTGCC GCTCGCTGGACTGGACCACTCGCCGAACCCGTCCTGGTTCGGGTCGAATTCGCCGACGCC GCGCAAGATGCCGGGGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)