cluster # 9455

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Oryza sativa
cluster # 9455 cluster # 9455 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9455#0 length = 1023 sequences # 6
consensusID : consensus_9455#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1023
fasta sequence
                              [GTGGCGCCGGATCTCGCGTTGCATGTCTCGATCCGTCTTCCCCATCTCGGTTTCTCTCACTTTACGAGTTTCTCTTGTTTGTGCAGCTGTTCTGCCCTTCTCCGCCTTTGAACTTTGCCATGTTCCACCGCTTCCTTCTTCCTGGATCCACGAGGTACTATCACTCTCTCATGAAGGAAAAGACCATATGTATTAATCCGCATAAGCTTCTGCTGATGACTATGGTCGAAGACACTATTACCAAGAAGGTTGCCGGAAACATATGCTCTAGTCTCAGCAATGCTAGGGCGATTGGGGCTGGAATCTGTAGTTTCTCTACGTCTGCGCCAAGGGGATATC-GAAGGGCCTTCTTTACAAACTCCTTCGAGGACAT-GGGGATTCTCAAGGATAT-GGCTTTGGTTCTCCATGCAGCTTTCAAAGGCTGGAAGACGAAGTTCCAGGACATCCCACCTATGAAAAAGTATGTTATGCTCCTAGGACTTGCTTGCTTGACTCTCCACCTTGCTCTTCATTACAAGATGAAGAAGATGGAGACTAACCTCAAGCAGGATATGATCAAGTTTCGTGCTGAAGTAAAGCTGGAGATTGAAGCAGCAGCCAACGCGATGCAGAAGGAGATCGCCTCAGAGCTTGCTAAGTCTGCTCAATTTAGGGCAGATTCAGTGGTTGCATTCCAGAAATGCAAGGCTCGTCCTGATGTGTGGTCGGAGTATTACTGCCTAACATTGCTGGAGGCCCTCATGAGGTCCAGAATCGATGGCAAATAGACTCTGGATTATCACTCGAACTGAGAAAACGATGATCGTCACTCGGAGCAGATTGTCTGGTCACTTGGTGCCTTGGTGGTTGTCAAATCTCGTTGTTTGGTTAGTTTCTATGACAGTTTGTGTGTGGTCATAAAGGGATTTAGATCGATGGGGTACACGATCTGCATGTAAGGAAGGATTTTTACGAGTGGCTATACTCATCAATTTTCCCAGCTCAATTCATCTTCTTATTCAGT--AAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF319883             [GTGGCGCCGGATCTCGCGTTGCATGTCTCGATCCGTCTTCCCCATCTCGGTTTCTCTCACTTTACGAGTTTCTCTTGTTTGTGCAGCTGTTCTGCCCTTCTCCGCCTTTGAACTTTGCCATGTTCCACCGCTTCCTTCTTCCTGGATCCACGAGGTACTATCACTCTCTCATGAAGGAAAAGACCATATGTATTAATCCGCATAAGCTTCTGCTGATGACTATGGTCGAAGACACTATTACCAAGAAGGTTGCCGGAAACATATGCTCTAGTCTCAGCAATGCTAGGGCGATTGGGGCTGGAATCTGTAGTTTCTCTACGTCTGCGCCAAGGGGATATCGGAAGGGCCTTCTTTACAAACTCCTTCGAGGACATGGGGGATTCTCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF316574             [GTGGCGCCGGATCTCGCGTTGCATGTCTCGATCCGTCTTCCCCATCTCGGTTTCTCTCACTTTACGAGTTTCTCTTGTTTGTGCAGCTGTTCTGCCCTTCTCCGCCTTTGAACTTTGCCATGTTCCACCGCTTCCTTCTTCCTGGATCCACGAGGTACTATCACTCTCTCATGAAGGAAAAGACCATATGTATTAATCCGCATAAGCTTCTGCTGATGACTATGGTCGAAGACACTATTACCAAGAAGGTTGCCGGAAACATATGCTCTAGTCTCAGCAATGCTAGGGCGATTGGGGCTGGAATCTGTAGTTTCTCTACGTCTGCGCCAAGGGGATATC GAAGGGCCTTCTTTACAAACTCCTTCGAGGACAT GGGGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU068873             [                                                                                                                                                                                                                                                                        GCTCTAGTCTCAGCAATGCTAGGGCGATTGGGGCTGGAATCTGTAGTTTCTCTACGTCTGCGCCAAGGGGATATC GAAGGGCCTTCTTTACAAACTCCTTCGAGGACAT GGGGATTCTCAAGGATAT GGCTTTGGTTCTCCATGCAGCTTTCAAAGGCTGGAAGACGAAGTTCCAGGACATCCCACCTATGAAAAAGTATGTTATGCTCCTAGGACTTGCTTGCTTGACTCTCCACCTTGCTCTTCATTACAAGATGAAGAAGATGGAGACTAACCTCAAGCAGGATATGATCAAGTTTCGTGCTGAAGTAAAGCTGGAGATTGAAGCAGCAGCCAACGCGATGCAGAAGGAGATCGCCTCAGAGCTTGCTAAGTCTGCTCAATTTAGGGCAGATTC                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU068874             [                                                                                                                                                                                                                                                                                                                                      CCAAGGGNATATC GAAGGCCCTTCTTTACAAACTCCTTCGAGGACAT GGGGATTCTCAAGGATNTGGGCTTTGGTTCTCCATGCAGCTTTCAAAGGCTGGAAGACGAAGTTCCAGGACATCCCACCTATGAAAAAGTATGTTATGCTCCTAGGACTTGCTTGCTTGACTCTCCACCTTGCTCTTCATTACAAGATGAAGAAGATGGAGACTAACCTCAAGCAGGATATGATCAAGTTTCGTGCTGAAGTAAAGCTGGAGATTGAAGCAGCAGCCAACGCGATGCAGAAGGAGATCGCCTCAGAGCTTGCTAAGTCTGCTCAATTTAGGGCAGATTCAGTGGTTGCATTCCAGAAATGCAAGGCTCGTCCTGATGTGTGGTCGGAGTATTACTGCCTAACATTGCTGGAGGCCCTCATGAGGTCCAGAATCGATGGCAAATAGACTCTGGATTATCACTCGAACTGAGAAAACGATGATCGTCACTCGGAGCAGATTGTCTGGTCACTTGGTGCCTTGGTGGTTGTCAAATCTCGTTGTTTGGTTAGTTTCTATGACAGTTTGTGTGTGGTCATAAAGGGATTTAGATCGATGGGGTACACGATCTGCATGTAAGGAAGGATTTTTACGAGTGGCTATACTCATCAATTTTCCCAGCTCAATTCATCTTCTTATTCAGT  AAAAA               ]
[-] EMBL CF316575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCTGCTCAATTTAGGGCAGATTCAGTGGTTGCATTCCAGAAATGCAAGGCTCGTCCTAATGTGTGGTCGGAGTATTACTGCCTAACATTGCTGGAGGCCCTCATGAGGTCCAGAATCGATGGCAAATAGACTCTGGATTGTCACTCGAACTGAGAAAACGATGATCGTCACTCGGACCAGATTGTCTGGTCACTTGGTCCCTTGGTGGTTGTCAAATCTCGTTGTTTGGTTAGTTTCTATGCCAGTTTGTGTGTGGTCATAAAGGGATTTAGATCGATGGGGTACCCGATCTGCATGTAAGGAAGGATTTTTACGAGTGGCTATACTCATCAATTTTCCCAGCTCAATTCATTTTTTTATTCAGTCCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA766358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCAAATNGACTCTGGATCATCACTCGAACTGAGAAAACGATGATCGTCACTCGGAGCAGATTGTCTGGTCACTTGGTGCCTTGGTGGTTGTCAAATCTCGTTGTTTGGTTAGTTTCTATGACAGTTTGTGTGTGGTCATAAAGGGATTTAGATCGATGGGGTACACGATCTGCATGTAAGGAANGATTTTTACGAGTGGCTATACTCATCAATTT                                                   ]




>consensus_9455#0
GTGGCGCCGGATCTCGCGTTGCATGTCTCGATCCGTCTTCCCCATCTCGGTTTCTCTCAC
TTTACGAGTTTCTCTTGTTTGTGCAGCTGTTCTGCCCTTCTCCGCCTTTGAACTTTGCCA
TGTTCCACCGCTTCCTTCTTCCTGGATCCACGAGGTACTATCACTCTCTCATGAAGGAAA
AGACCATATGTATTAATCCGCATAAGCTTCTGCTGATGACTATGGTCGAAGACACTATTA
CCAAGAAGGTTGCCGGAAACATATGCTCTAGTCTCAGCAATGCTAGGGCGATTGGGGCTG
GAATCTGTAGTTTCTCTACGTCTGCGCCAAGGGGATATCGAAGGGCCTTCTTTACAAACT
CCTTCGAGGACATGGGGATTCTCAAGGATATGGCTTTGGTTCTCCATGCAGCTTTCAAAG
GCTGGAAGACGAAGTTCCAGGACATCCCACCTATGAAAAAGTATGTTATGCTCCTAGGAC
TTGCTTGCTTGACTCTCCACCTTGCTCTTCATTACAAGATGAAGAAGATGGAGACTAACC
TCAAGCAGGATATGATCAAGTTTCGTGCTGAAGTAAAGCTGGAGATTGAAGCAGCAGCCA
ACGCGATGCAGAAGGAGATCGCCTCAGAGCTTGCTAAGTCTGCTCAATTTAGGGCAGATT
CAGTGGTTGCATTCCAGAAATGCAAGGCTCGTCCTGATGTGTGGTCGGAGTATTACTGCC
TAACATTGCTGGAGGCCCTCATGAGGTCCAGAATCGATGGCAAATAGACTCTGGATTATC
ACTCGAACTGAGAAAACGATGATCGTCACTCGGAGCAGATTGTCTGGTCACTTGGTGCCT
TGGTGGTTGTCAAATCTCGTTGTTTGGTTAGTTTCTATGACAGTTTGTGTGTGGTCATAA
AGGGATTTAGATCGATGGGGTACACGATCTGCATGTAAGGAAGGATTTTTACGAGTGGCT
ATACTCATCAATTTTCCCAGCTCAATTCATCTTCTTATTCAGTAAAAAAAAAAAAAAAAA
AAA
clustalw multiple alignements is not computed in this case