These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9463#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1694 fasta sequence [CGCTATTTAGTTCAGTTCCAAGAAGTACCGGTTGCCAGGTAATTGGCGATGAAGTTTTGGCAAGTTGTTCACGAGGACCTCGTGGAAATGAACAGTATGCTGCTGTATTTGCATCATTTGTTGCAGGTATGGCAAGCCTGGTTGGCATTGACTTCAGTGCCAAGATCCTTGCTTCTCTTGCAAAGTTGTTTGAGGATGAGTACTCAAAAGAAGATGGTCTATCTCTGAGGAATCTTACTTTACTGCTCTGTTATTTGTGCATATTTGATGTCATTTCAAGTGATCTTGTATATGATCTGCTATCAGTGCTGAGCAAGCGCTTGACAGAGCTGGATGTCTCGACTGTATTGACCATCCTACAGTGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGACTTTGTTCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGAATGGAATTTATGCTCGAGACAATATGTGACATTAAGAACAACAAAAAAAGGCCCAAAGAGGATCCTGCACACCACACTCGCATAAAAAAGTGGCTTCAAAAGCTGAAAGCAGAAGATGTCCTCTTGCGCGGGTTAACATGGAATAAGCTTTTGGATCCTGATAAGAAAGGGCAGTGGTGGTTGTCTGGGGATGTTTCATCCACTGTANGCAATATTGAAGAAGTTGCGGCAGTTATAAGCAAGGAGGTTGTTGAAGCACAAAAACTTGTTCAGCTTGCAGCTGCTCAGCGGATGAACACTGACATACGAAGAGCAATCTTCTGCATTATAATGAGTGCTGAGGACTATGTAGATGCTTTTGAGAAGCTCTTGAGGTTGGACCTTTCCGGGAAGCAGGATCGGGAAATCATAAGGGTCATTGTGGACTGTTGTCTGCAAGAAAAGATGTTCAATAAGTATTACGCAGTCCTCGCTTCGAAGCTATGCAGCCATGATAAAAATCACAAGTTCAGCTTACAGTACTGCATCTGGGATCATTTTAAGGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACAC-TCTCACTTGCAACCCTGA-AGGTT-GTC-AAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTT-CCGAATGC-TGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCT-TT-ACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGA-TCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTT-TTGATGTAATTTGTCTGACATTTCAAGGTGTTACCTCCCTGTACCCATTTTTGACTCTGTGTCCCTCCA-GT-TTACC-TA-TACAAC-TAGCAATCATGTGACACAGCTCTAGGTTGTA-GGTTCATTA-TTGTGCTCTGAGAAATCAGAGGATTTTTTTT--TAAGTTACCCACATGAGGAATTTGAGAGAATCTTCATGTGTGACACTGATGCATTCGCAATTAGAAAGCTTGTCCTGAGAGACCTTGATGGGGCTTGAATGTTAAATCAAAATTTCTGGGAGAATGAAAAAAAAAA] [+] EMBL CB621216 [CGCTATTTAGTTCAGTTCCAAGAAGTACCGGTTGCCAGGTAATTGGCGATGAAGTTTTGGCAAGTTGTTCACGAGGACCTCGTGGAAATGAACAGTATGCTGCTGTATTTGCATCATTTGTTGCAGGTATGGCAAGCCTGGTTGGCATTGACTTCAGTGCCAAGATCCTTGCTTCTCTTGCAAAGTTGTTTGAGGATGAGTACTCAAAAGAAGATGGTCTATCTCTGAGGAATCTTACTTTACTGCTCTGTTATTTGTGCATATTTGATGTCATTTCAAGTGATCTTGTATATGATCTGCTATCAGTGCTGAGCAAGCGCTTGACAGAGCTGGATGTCTCGACTGTATTGACCATCCTACAGTGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGACTTTGTTCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGAATGGAATTTATGCTCGAGACAATATGTGACATTAAGAACAACAAAAAAAGGCCCAAAGAGGATCCTGCACACCACACTCGCATAAAAAAGTGGCTTCAAAAGCTGAAAGCAGAAGATGTCCTCTTGCGCGGGTTAACATGGAATAAGCTTTTGGATCCTGATAAGAAAGGGCAGTGGTGGTTGTCTGGGGATGTTTCATCCACTGTANGCAATATTGAAGAAGTTGC ] [+] EMBL AK064493 [ GCAGGTATGGCAAGCCTGGTTGGCATTGACTTCAGTGCCAAGATCCTTGCTTCTCTTGCAAAGTTGTTTGAGGATGAGTACTCAAAAGAAGATGGTCTATCTCTGAGGAATCTTACTTTACTGCTCTGTTATTTGTGCATATTTGATGTCATTTCAAGTGATCTTGTATATGATCTGCTATCAGTGCTGAGCAAGCGCTTGACAGAGCTGGATGTCTCGACTGTATTGACCATCCTACAGTGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGACTTTGTTCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGAATGGAATTTATGCTCGAGACAATATGTGACATTAAGAACAACAAAAAAAGGCCCAAAGAGGATCCTGCACACCACACTCGCATAAAAAAGTGGCTTCAAAAGCTGAAAGCAGAAGATGTCCTCTTGCGCGGGTTAACATGGAATAAGCTTTTGGATCCTGATAAGAAAGGGCAGTGGTGGTTGTCTGGGGATGTTTCATCCACTGTAGGCAATATTGGAGAAGTTGCGGCAGTTATAAGCAAGGAGGTTGTTGAAGCACAAAAACTTGTTCAGCTTGCAGCTGCTCAGCGGATGAACACTGACATACGAAGAGCAATCTTCTGCATTATAATGAGTGCTGAGGACTATGTAGATGCTTTTGAGAAGCTCTTGAGGTTGGACCTTTCCGGGAAGCAGGATCGGGAAATCATAAGGGTCATTGTGGACTGTTGTCTGCAAGAAAAGATGTTCAATAAGTATTACGCAGTCCTCGCTTCGAAGCTATGCAGCCATGATAAAAATCACAAGTTCAGCTTACAGTACTGCATCTGGGATCATTTTAAGGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACAC TCTCACTTGCAACCCTGA AGGTT GTC AAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTT CCGAATGC TGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCT TT ACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGA TCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTT TTGATGTAATTTGTCTGACATTTCAAGGTGTTACCTCCCTGTACCCATTTTTGACTCTGTGTCCCTCCA GT TTACC TA TACAAC TAGCAATCATGTGACACAGCTCTAGGTTGTA GGTTCATTA TTGTGCTCTGAGAAATCAGAGGATTTTTTTC TAAGTTACCCACATGAGGAATTTGAGAGAATCTTCATGTGTGACACTGATGCATTCGCAATTAGAAAGCTTGTCCTGAGAGACCTTGATGGGGCTTGAATGTTAAATCAAAATTTCTGGGA ] [+] EMBL AU069712 [ CATTTCAAGTNATCTTGTATATNANCTGCTATCAGTNCTGAGCAAGCNCTTGANAGANCTGGATGTNTCGACTGTNTTGACCATCCTACAGTGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGANTTTTTNCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGATTGGAATTTATGCTCGANACAATATGTGACATTAAGAACANCAAAAAAAGGCCCAAAGAGGATCCTGCACANCACACTCGCATAAAANAGTG ] [-] EMBL CB621217 [ AGTGCTGAGGACTATGTAGATGCTTTTGAGAAGCTCTTGAGGTTGGACCTTTCCGGGAAGCAGGATCGGGAAATCATAAGGGTCATTGTGGACTGTTGTCTGCAAGAAAAGATGTTCAATAAGTATTACGCAGTCCTCGCTTCGAAGCTATGCAGCCATGATAAAAATCACAAGTTCAGCTTACAGTACTGCATCTGGGATCATTTTAAGGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACAC TCTCACTTGCAACCCTGA AGGTT GTC AAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTT CCGAATGC TGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCT TT ACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGA TCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTT TTGATGTAATTTGTCTGACATTTCAAGGTGTTACCTCCCTGTACCCATTTTTGACTCTGTGTCCCTCCA GT TTACC TA TACAAC TAGCAATCATGTGACACAGCTCTAGGTTGTA GGTTCATTA TTGTGCTCTGAGAAATCAGAGGATTTTTTTT TAAGTTACCCACATGAGGAATTTGAGAGAATCTTCATGTGTGACACTGATGCATTCGCAATTAGAAAGCTTGTCCTGAGAGACCTTGATGGGGCTTGAATGTTAAATCAAAAT ] [-] EMBL CB637423 [ GGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACAC TCTCACTTGCAACCCTGA AGGTT GTC AAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTT CCGAATGC TGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCT TT ACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGA TCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTT TTGATGTAATTTGTCTGACATTTCAAGGTGTTACCTCCCTGTACCCATTTTTGACTCTGTGTCCCTCCA GT TTACC TA TACAAC TAGCAATCATGTGACACAGCTCTAGGTTGTA GGTTCATTA TTGTGCTCTGAGAAATCAGAGGATTTTTTTT TAAGTTACCCACATGAGGAATTTGAGAGAATCTTCATGTGTGACACTGATGCATTCGCAATTAGAAAGCTTGTCCTGAGAGACCTTGATGGGGCTTGAATGTTAAAAAAAAATTTTTGGGAG ] [+] EMBL BM419457 [ TTACACGTCTCACTTGCACCCTTGATAGGTTGGTCAAAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTTCCCGAATGCNTGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCTGTTGACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGAGTCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTTGTTGATGTAATTTGTCTGACATTTCAAGGTGTTACCTCCCTGTACCCATTTTTGACTCTGTGTCCCTCCAGGTGTTACCGTAGTACAACGTAGCAATCATGTGACACAGCTCTAGGTTGTAGGGTTCATTAGTTGTGCTCTGAGAAATCAGAGGATGTTTTTTCGTAAGTTACCCACATGAGGAATTTGAGAGAATCTTCATGTGTGACACTGATGCATTCGCAATTAGAAAGCTTGTCCTGAGAGACCTTGATGGGGCTTGAATGTTAAATCGAAATTTCTGGGAGAATGAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||