These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9466#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1722 fasta sequence [ACAGCATGCGAGCAAGCAAGAGCGGTTTTAGCCATCAAAGCCGAAAGCCATCCGGGCATTCGCTCTCCCCTCGCTGCTAGCTAGCTTTGCTTGCTAATCTAGAGCTAAGCACCAAATGGTCCTGATTGTTCTTCTCGCTTCTGAATTGTTGTGACCTGTAACTACAAAGGCATAGTTAGGTAGATATAGAAAGAGGGGGGGAGAGGGGCCGGAGGCCGGAGCGGCGGGGGCGGCGGCGAGATGAAGCTCCACTTCGTGCTCAGGTTCCTGTTCGGCCCCGTGCCGGTGTACTTCTCGGCGCTGGCCATCCTCATCCTGCTGACGAACGCGCAGTACTTCGGGCTGGTGGGCGTCACCGTTCCCCGCGCGACGAAGCTGGCGTCGTCGGCGCCGGTGGTGAGCGTGATGAAGTACTGCGACATCTTCCGCGGCGAGTGGGTGCCGGACTCCGACGCGCCCTACTACAACCACAAGACGTGTTACATGATCCAGGAGCACCAGAACTGCCTCAAGTACGGCCGCCCCGACCTCGAATTCCTCAAGTGGCGGTGGCGCCCCTCCGGCTGCGAGCTGCCCCGCTTCGACCCCGTGCAGTTCCTACAGTTCAACCGTCACAAGTCGCTCGCCTTCGTCGGTGACTCGCTGGCTCGCAACCACATGCAATCCCTGCTCTGCCTCCTCTCCCAGGTGGCGTATCCCAAAGACATGTCGGCGAACCCGACGACTCAGAACAAGGTGTACCACTACAGGGGGTACAACTTCACCGTCAGCATGTTCTGGTCGCCGTTCCTGGTGAAGGCGCGTGAGCCCGACCACGACGGGCCGGCGCACACGGGCCACTGGAGCCTGTACCTCGACGAGCCCGACCAGTCGTGGGTGTCCGAGATCTCGCGGTTCGACTACGTGCTGGTGTCCGCCGCCAACTGGTTCTCCAGGCCGTCGCTCTTCTACGAGAAGCGGCGGCTGGTCGGGTGCAGCTTCTGCAGCAGGCAGTACGGCGTGCCGGACCTGACGCTCTACTACTCGCAGCGCCGGGCGTGGCGCGTGGCGCTGAAGGCGATCAACGACCTGGAGAGCCTCCGCGGGCGGGTGATCGTGCGGATGCTGTCGCCGATGTCGCACTTCGAGAACGGGACGTGGGACCAGGGCGGCAACTGCAAGCGGACGCAGCCGCTCCGGAGCAACGAGACGGTGATGGAGGGGCGGGACCTGCACTTCTACACGGCGCAGATGGAGGAGTACCGCGCCGCGGAGAAGGTCGCGGAGGCCAAGGGCCGGCGGATGATGCTCATGGACGCCACGGCGGCGATGCTGATGCGGCCCGACGGCCACCCCAGCCGGTACGGCCACCTGCCGAACCAGAAGGTGCAGCTCTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCATCGACATCTGGAACGACATGCTCTTCCAGATGCTCCTCGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAATGCGACTTCTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAGCAGTTTTGACAAGGATTTATTCGAACTTCCCCAATAGATTCTTTTTTTCTCTCTCTTTTCCCTTCATTTCCTTTCATTTTTCGTTTATGCTGACGCGAATTTTTAATGGATCGTCACCGGAAAGAGTGAACGAAAGTGTGCCTCCGAAAGACCACTGTGATACTGTCACTCCATTCATTTCCAATACT] [+] EMBL AK061145 [ACAGCATGCGAGCAAGCAAGAGCGGTTTTAGCCATCAAAGCCGAAAGCCATCCGGGCATTCGCTCTCCCCTCGCTGCTAGCTAGCTTTGCTTGCTAATCTAGAGCTAAGCACCAAATGGTCCTGATTGTTCTTCTCGCTTCTGAATTGTTGTGACCTGTAACTACAAAGGCATAGTTAGGTAGATATAGAAAGAGGGGGGGAGAGGGGCCGGAGGCCGGAGCGGCGGGGGCGGCGGCGAGATGAAGCTCCACTTCGTGCTCAGGTTCCTGTTCGGCCCCGTGCCGGTGTACTTCTCGGCGCTGGCCATCCTCATCCTGCTGACGAACGCGCAGTACTTCGGGCTGGTGGGCGTCACCGTTCCCCGCGCGACGAAGCTGGCGTCGTCGGCGCCGGTGGTGAGCGTGATGAAGTACTGCGACATCTTCCGCGGCGAGTGGGTGCCGGACTCCGACGCGCCCTACTACAACCACAAGACGTGTTACATGATCCAGGAGCACCAGAACTGCCTCAAGTACGGCCGCCCCGACCTCGAATTCCTCAAGTGGCGGTGGCGCCCCTCCGGCTGCGAGCTGCCCCGCTTCGACCCCGTGCAGTTCCTACAGTTCAACCGTCACAAGTCGCTCGCCTTCGTCGGTGACTCGCTGGCTCGCAACCACATGCAATCCCTGCTCTGCCTCCTCTCCCAGGTGGCGTATCCCAAAGACATGTCGGCGAACCCGACGACTCAGAACAAGGTGTACCACTACAGGGGGTACAACTTCACCGTCAGCATGTTCTGGTCGCCGTTCCTGGTGAAGGCGCGTGAGCCCGACCACGACGGGCCGGCGCACACGGGCCACTGGAGCCTGTACCTCGACGAGCCCGACCAGTCGTGGGTGTCCGAGATCTCGCGGTTCGACTACGTGCTGGTGTCCGCCGCCAACTGGTTCTCCAGGCCGTCGCTCTTCTACGAGAAGCGGCGGCTGGTCGGGTGCAGCTTCTGCAGCAGGCAGTACGGCGTGCCGGACCTGACGCTCTACTACTCGCAGCGCCGGGCGTGGCGCGTGGCGCTGAAGGCGATCAACGACCTGGAGAGCCTCCGCGGGCGGGTGATCGTGCGGATGCTGTCGCCGATGTCGCACTTCGAGAACGGGACGTGGGACCAGGGCGGCAACTGCAAGCGGACGCAGCCGCTCCGGAGCAACGAGACGGTGATGGAGGGGCGGGACCTGCACTTCTACACGGCGCAGATGGAGGAGTACCGCGCCGCGGAGAAGGTCGCGGAGGCCAAGGGCCGGCGGATGATGCTCATGGACGCCACGGCGGCGATGCTGATGCGGCCCGACGGCCACCCCAGCCGGTACGGCCACCTGCCGAACCAGAAGGTGCAGCTCTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCATCGACATCTGGAACGACATGCTCTTCCAGATGCTCCTCGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAATGCGACTTCTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAGCAGTTTTGACAAGGATTTATTCGAACTTCCCCAATAGATTCTTTCTTTCTCTCTCTTTTCCCTTCATTTCCTTTCATTTTTCGTTTATGCTGACGCGAATTTTTAATGGATCGTCACCGGAAAGAGTGAACGAAAGTGTGCCTCCGAAAGACCACTGTGATACTGTCACTCCATTCATTTCCAATACT] [+] EMBL AK103547 [ CAGCATGCGATCAAGCAAGAGCGGTTTTAGCCATCAAAGCCGAAAGCCATCCGGGCATTCGCTCTCCCCTCGCTGCTAGCTAGCTTTGCTTGCTAATCTAGAGCTAAGCACCAAATGGTCCTGATTGTTCTTCTCGCTTCTGAATTGTTGTGACCTGTAACTACAAAGGCATAGTTAGGTAGATATAGAAAGAGGGGGGGAGAGGGGCCGGAGGCCGGAGCGGCGGGGGCGGCGGCGAGATGAAGCTCCACTTCGTGCTCAGGTTCCTGTTCGGCCCCGTGCCGGTGTACTTCTCGGCGCTGGCCATCCTCATCCTGCTGACGAACGCGCAGTACTTCGGGCTGGTGGGCGTCACCGTTCCCCGCGCGACGAAGCTGGCGTCGTCGGCGCCGGTGGTGAGCGTGATGAAGTACTGCGACATCTTCCGCGGCGAGTGGGTGCCGGACTCCGACGCGCCCTACTACAACCACAAGACGTGTTACATGATCCAGGAGCACCAGAACTGCCTCAAGTACGGCCGCCCCGACCTCGAATTCCTCAAGTGGCGGTGGCGCCCCTCCGGCTGCGAGCTGCCCCGCTTCGACCCCGTGCAGTTCCTACAGTTCAACCGTCACAAGTCGCTCGCCTTCGTCGGTGACTCGCTGGCTCGCAACCACATGCAATCCCTGCTCTGCCTCCTCTCCCAGGTGGCGTATCCCAAAGACATGTCGGCGAACCCGACGACTCAGAACAAGGTGTACCACTACAGGGGGTACAACTTCACCGTCAGCATGTTCTGGTCGCCGTTCCTGGTGAAGGCGCGTGAGCCCGACCACGACGGGCCGGCGCACACGGGCCACTGGGGCCTGTACCTCGACGAGCCCGACCAGTCGTGGGTGTCCGAGATCTCGCGGTTCGACTACGTGCTGGTGTCCGCCGCCAACTGGTTCTCCAGGCCGTCGCTCTTCTACGAGAAGCGGCGGCTGGTCGGGTGCAGCTTCTGCAGCAGGCAGTACGGCGTGCCGGACCTGACGCTCTACTACTCGCAGCGCCGGGCGTGGCGCGTGGCGCTGAAGGCGATCAACGACCTGGAGAGCCTCCGCGGGCGGGTGATCGTGCGGATGCTGTCGCCGATGTCGCACTTCGAGAACGGGACGTGGGACCAGGGCGGCAACTGCAAGCGGACGCAGCCGCTCCGGAGCAACGAGACGGTGATGGAGGGGCGGGACCTGCACTTCTACACGGCGCAGATGGAGGAGTACCGCGCCGCGGAGAAGGTCGCGGAGGCCAAGGGCCGGCGGATGATGCTCATGGACGCCACGGCGGCGATGCTGATGCGGCCCGACGGCCACCCCAGCCGGTACGGCCACCTGCCGAACCAGAAGGTGCAGCTCTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCATCGACATCTGGAACGACATGCTCTTCCAGATGCTCCTCGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAATGCGACTTCTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAGCAGTTTTGACAAGGATTTATTC ] [+] EMBL AK104312 [ AGCATGCGAGCAAGCAAGAGCGGTTTTAGCCATCAAAGCCGAAAGCCATCCGGGCATTCGCTCTCCCCTCGCTGCTAGCTAGCTTTGCTTGCTAATCTAGAGCTAAGCACCAAATGGTCCTGATTGTTCTTCTCGCTTCTGAATTGTTGTGACCTGTAACTACAAAGGCATAGTTAGGTAGATATAGAAAGAGGGGGGGAGAGGGGCCGGAGGCCGGAGCGGCGGGGGCGGCGGCGAGATGAAGCTCCACTTCGTGCTCAGGTTCCTGTTCGGCCCCGTGCCGGTGTACTTCTCGGCGCTGGCCATCCTCATCCTGCTGACGAACGCGCAGTACTTCGGGCTGGTGGGCGTCACCGTTCCCCGCGCGACGAAGCTGGCGTCGTCGGCGCCGGTGGTGAGCGTGATGAAGTACTGCGACATCTTCCGCGGCGAGTGGGTGCCGGACTCCGACGCGCCCTACTACAACCACAAGACGTGTTACATGATCCAGGAGCACCAGAACTGCCTCAAGTACGGCCGCCCCGACCTCGAATTCCTCAAGTGGCGGTGGCGCCCCTCCGGCTGCGAGCTGCCCCGCTTCGACCCCGTGCAGTTCCTACAGTTCAACCGTCACAAGTCGCTCGCCTTCGTCGGTGACTCGCTGGCTCGCAACCACATGCAATCCCTGCTCTGCCTCCTCTCCCAGGTGGCGTATCCCAAAGACATGTCGGCGAACCCGACGACTCAGAACAAGGTGTACCACTACAGGGGGTACAACTTCACCGTCAGCATGTTCTGGTCGCCGTTCCTGGTGAAGGCGCGTGAGCCCGACCACGACGGGCCGGCGCACACGGGCCACTGGAGCCTGTACCTCGACGAGCCCGACCAGTCGTGGGTGTCCGAGATCTCGCGGTTCGACTACGTGCTGGTGTCCGCCGCCAACTGGTTCTCCAGGCCGTCGCTCTTCTACGAGAAGCGGCGGCTGGTCGGGTGCAGCTTCTGCAGCAGGCAGTACGGCGTGCCGGACCTGACGCTCTACTACTCGCAGCGCCGGGCGTGGCGCGTGGCGCTGAAGGCGATCAACGACCTGGAGAGCCTCCGCGGGCGGGTGATCGTGCGGATGCTGTCGCCGATGTCGCACTTCGAGAACGGGACGTGGGACCAGGGCGGCAACTGCAAGCGGACGCAGCCGCTCCGGAGCAACGAGACGGTGATGGAGGGGCGGGACCTGCACTTCTACACGGCGCAGATGGAGGAGTACCGCGCCGCGGAGAAGGTCGCGGAGGCCAAGGGCCGGCGGATGATGCTCATGGACGCCACGGCGGCGATGCTGATGCGGCCCGACGGCCACCCCAGCCGGTACGGCCACCTGCCGAACCAGAAGGTGCAGCTCTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCATCGACATCTGGAACGACATGCTCTTCCAGATGCTCCTCGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAATGCGACTTCTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAGCAGTTTTGACAAGGATTTATTCGAACTTCCCCAATAGATTC TTTTTTCTCTCTCTTTTCCCTTCATTTCCTTTCATTTTTCGTTTATGCTGACGCGAATTTTTAATGGATCGTCACCGGAAAGAGTGAACGAAAG ] [+] EMBL CF280713 [ GCTTTGCTTGCTAATCTAGAGCTAAGCACCAAATGGTCCTGATTGTTCTTCTCGCTTCTGAATTGTTGTGACCTGTAACTACAAAGGCATAGTTAGGTAGATATAGAAAGAGGGGGGGAGAGGGGCCGGAGGCCGGAGCGGCGGGGGCGGCGGCGAGATGAAGCTCCACTTCGTGCTCAGGTTCCTGTTCGGCCCCGTGCCGGTGTACTTCTCGGCGCTGGCCATCCTCATCCTGCTGACGAACGCGCAGTACTTCGGGCTGGTGGGCGTCACCGTTCCCCGCGCGACGAAGCTGGCGTCGTCGGCGCCGGTGGTGAGCGTGATGAAGTACTGCGACATCT ] [+] EMBL AK058693 [ GGACGCCACGGCGGCGATGCTGATGCGGCCCGACGGCCACCCCAGCCGGTACGGCCACCTGCCGAACCAGAAGGTGCAGCTCTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCACCGACATCTGGAACGACATGCTCTTCCAGATGCTCCTCGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAATGCGACTTCTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAGCAGTTTTGACAAGGATTTATTCGAACTTCCCCAATAGATTCTTTTTTTCTCTCTC ] [-] EMBL CF280714 [ GTACGGCCACCTGCCGAACCAGAAGGTGCAGCTTTACAACGACTGCATCCACTGGTGCCTGCCAGGCCCCATCGACATTTGGAAGGACATGCTCTTCCAGATGCTCCTTGTCTAACGCGATCGATCGCCAATTCGCCATCGGTAAAAGCAAATTTTACTGCACAGACAGGATTGCTCTTGCTGTTGTTTCAAAACCATTTTGACAAGGATTTATTCGAACTTCCCCAATAGATTCTTTTTTTCTATCTCTTTTCCCTTCATTCCCTTTCATTTTTCGTTTATGCTGACGCGAATTTTTAATGGATCGTCA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||