These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1856 fasta sequence [TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGTTGGTTTGT] [+] EMBL AK101631 [TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGTTGGTTTGT] [-] EMBL CB670230 [ TAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTGCCAGAAGTCCAGAATGCAGAAACGCCAGATCT ] [-] EMBL CF322047 [ GAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAAAATGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAaaaa ] consensusID : consensus_9471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1550 fasta sequence [CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGT] [+] EMBL AK099528 [CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGT] consensusID : consensus_9471#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 837 fasta sequence [AGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAAATTGCTCATTCTAAGACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTGTTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAGTCAAGATACACATGTATATTTGTCACTGGTATTTGACTATTCATGC] [+] EMBL CB670229 [AGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAAATTGCTCATTCTAAGACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTGTTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAGTCAAGATACACATGTATATTTGTCACTGGTATTTGACTATTCATGC] consensusID : consensus_9471#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence [CTCCTTCTCCCGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGGACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTC] [+] EMBL CF322046 [CTCCTTCTCCCGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGGACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9471#0 TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 60 consensus_9471#1 ----------CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 50 consensus_9471#3 ----------CTCCTTCTCCC-GTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 49 consensus_9471#2 -----------------------------------------------AGCCTCGCGGAGC 13 ************* consensus_9471#0 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 120 consensus_9471#1 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 110 consensus_9471#3 CGCTGATTCAGCGAATTCCTCTGCAATTAGAG-GATGAAGTGGATGA---TTTGGATGAT 105 consensus_9471#2 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 73 ******************************** **** * * ** * * * consensus_9471#0 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 180 consensus_9471#1 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 170 consensus_9471#3 TACTTGGGACGT----GGTGGCGGCGAGACGTGCAAAGAGATGG--------ACCATGAT 153 consensus_9471#2 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 133 **** ** ** ** * * * * **** * * ** * * * consensus_9471#0 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 240 consensus_9471#1 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 230 consensus_9471#3 TGCAAGGTG-TGCG-GTGCTAGTTTTAAGAAGCCGGCCCATTT--GAGGCAACACATGCA 209 consensus_9471#2 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 193 * *** * * * **** * ** * * ** ** * ** * ** * consensus_9471#0 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 299 consensus_9471#1 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 289 consensus_9471#3 GAGCCATTCACTTGAG-ACTATATATGACTGCGTGAAGCATT----GGATCCCAAAGGAC 264 consensus_9471#2 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 252 *** ** ** ** *** * ** *** * *** *** * **** consensus_9471#0 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 359 consensus_9471#1 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 349 consensus_9471#3 TCCAAAATG-CGTGAAG-GCTTTGA-ATGGACTAGTATCA----GGATGGGGAGACTCTC 317 consensus_9471#2 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 312 * ** ** * ** ** ****** * ** * ** ** * * consensus_9471#0 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCAC 419 consensus_9471#1 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGA--------- 400 consensus_9471#3 CTGAGAAGCT---CCATCAAGAATGCCTCGTTCACACACTTT---TTCAGA--------- 362 consensus_9471#2 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTT--- 369 * ****** **** * * * ** * * ** ** *** consensus_9471#0 TATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAA 479 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 GGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATG 539 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAA 599 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGA 659 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 AGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAG 719 consensus_9471#1 ---------------------------------------GGCCCTTTTCCTGCCATGTAG 421 consensus_9471#3 ---------------------------------------GGCCCTTTTCCTGCCATGTAG 383 consensus_9471#2 ---------------------------------------CACTATTTTGTTAC-ATATGG 389 * **** * * ** * * consensus_9471#0 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 768 consensus_9471#1 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 470 consensus_9471#3 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 432 consensus_9471#2 ATGTGTGAAGCATTGG--ATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACT 447 *** ** * * * ** *** * *** * ** *** * ** consensus_9471#0 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 828 consensus_9471#1 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 530 consensus_9471#3 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 492 consensus_9471#2 AGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCT 507 * * ** *** * * * ** * * * *** **** * * * consensus_9471#0 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 887 consensus_9471#1 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 589 consensus_9471#3 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 551 consensus_9471#2 TCTTCAGACTA-TATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTG 566 * * ** ** *** * ** ** ** ** * ** * * *** consensus_9471#0 AAAGCAA-GAAAGAGTT--CATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATG 944 consensus_9471#1 AAAGCAA-GAAAGAGTT--CATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATG 646 consensus_9471#3 AAAGCAA-GAAAGAGTT--C---------------------------------------- 568 consensus_9471#2 AAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAA 626 ** ** *** * * consensus_9471#0 CTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCT 1004 consensus_9471#1 CTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCT 706 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 TGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAA--ATTGCTCATTCTAAG 684 consensus_9471#0 GCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACA 1064 consensus_9471#1 GCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACA 766 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTG 744 consensus_9471#0 AATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACT 1124 consensus_9471#1 AATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACT 826 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 TTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAG-TCAAGATACACA 803 consensus_9471#0 TCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACC 1184 consensus_9471#1 TCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACC 886 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 TGTATATTTGTCACTGG-TATTTGACTATTCATGC------------------------- 837 consensus_9471#0 TCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAG 1244 consensus_9471#1 TCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAG 946 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGT 1304 consensus_9471#1 TCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGT 1006 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 ACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATT 1364 consensus_9471#1 ACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATT 1066 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATAC 1424 consensus_9471#1 TCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATAC 1126 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTG 1484 consensus_9471#1 CTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTG 1186 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 ATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATA 1544 consensus_9471#1 ATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATA 1246 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAA 1604 consensus_9471#1 CAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAA 1306 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTA 1664 consensus_9471#1 CGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTA 1366 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAT 1724 consensus_9471#1 TGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAT 1426 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 ATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAG 1784 consensus_9471#1 ATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAG 1486 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 GAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCA 1844 consensus_9471#1 GAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCA 1546 consensus_9471#3 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 AGGTTGGTTTGT 1856 consensus_9471#1 AGGT-------- 1550 consensus_9471#3 ------------ consensus_9471#2 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||