cluster # 9480

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Oryza sativa
cluster # 9480 cluster # 9480 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9480#0 length = 577 sequences # 6
consensusID : consensus_9480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 577
fasta sequence
                              [AATCATACAGAGATCAGCTATAGCGA-GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG-CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC-GTCGCCATCGGCGTCC-ACG--TTTACG-CCGCCT-AATTACTTAA-TTACTTG-AACTTCTT-CTTC-TTCCCGTTCT-GCCTGCTTGTTTGGTC-AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C74184               [AATCATACAGAGATCAGCTATAGCGATGGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGG GGCGAGACACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTCGGTCGCCATCGG GTCCAACGGTTTTACGCCCGCCTAAATTACTTAATTTACTTGAAACTTCTTACTTC TTNCCGTTCT Gacc                                                                                                                                                                                                            ]
[+] EMBL AU090490             [ ATCATACAGAGATCAGCTATAGCGA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGTCC ACG  TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAA          ]
[+] EMBL AU070466             [                        GA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGG GTCC ACG  TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTCTTTCCCGTTCTGGCCTGCTTGTTTGG C AATTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGC                                                                                                                                                         ]
[+] EMBL AU090526             [                        GA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGT C ACG  TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTCAAGTTCTTG                                                                                                                                                                                       ]
[+] EMBL AU090527             [                         A GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCNAGGGCNAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTNGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATNTTCGTC GTCGCCATCGGNGTCC ACG  TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAANAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK060288             [                                     GTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGTCC ACG  TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTCCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGCCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAA                                    ]




>consensus_9480#0
AATCATACAGAGATCAGCTATAGCGAGGCATACATTGTACATACACCAGCAGAGGTCGAG
ATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCG
GCGAGCACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCG
GGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACC
AGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC
GTCGCCATCGGCGTCCACGTTTACGCCGCCTAATTACTTAATTACTTGAACTTCTTCTTC
TTCCCGTTCTGCCTGCTTGTTTGGTCAGTTCTTGCGAGTAGCATTAAGCAGGAACAGGAT
GTGCATGCGTATATTTGTATAGTTCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCA
GTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGA
ACGATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case