cluster # 9487

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Oryza sativa
cluster # 9487 cluster # 9487 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9487#0 length = 1001 sequences # 6
consensusID : consensus_9487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1001
fasta sequence
                              [CGCTCGTCTTCTCCATCGGCGGCGGCGGCGGCGGGCGGCGGTGGCGGCGGGCCTTCAGTACGGCTCCTCCCGTCGGTAGCTCC-GCCCATTCTCGACGTGCGCCTCCCCGGCGACGCGGCGAGGCCTCCCGTCACCTCGAACCCCTGTCTAAGCCTAGGGCGGCGGCGATCGCGGCCAGTAGAGGGCGGCGCGGCAGCGGCGACAGCAGCTGCGATCCTCCATCAGAGGGAGACCTGCAGGAGCGAAGCTGACAAGAGGCAGAGGTCGCCTCCCATGGATTCTCTCCATCTCGTGCACGTCAAGCTCCTGGCTGCCGATCTCCTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTCGCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT-CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAA-GGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCAT-GGCCAA-GGAATGTTACGATCTGCGGCCGCCTTCTGCTTGAGGCTCATCTCGGAGGAAGTTCGTGCAATGTAATGTTCAGAATATGTTTGATGTTTCTTTGTGGAATTGCTGAAGATTTGAACTGTGAGACAATCCTGTAATGCATGTGACAAGCTCTGTTGTTATTTGCAGAGACTTTTGGGTTCATTCTGTTGGATTTACCCCATTAAGCATCAGGGTTGTTCACTTGTTTGTGTCTAGTTTATTTATATCTAAATACAGAGGCTCCTAGTGACAGGAGATTGC]

[+] EMBL AK071364             [CGCTCGTCTTCTCCATCGGCGGCGGCGGCGGCGGGCGGCGGTGGCGGCGGGCCTTCAGTACGGCTCCTCCCGTCGGTAGCTCC GCCCATTCTCGACGTGCGCCTCCCCGGCGACGCGGCGAGGCCTCCCGTCACCTCGAACCCCTGTCTAAGCCTAGGGCGGCGGCGATCGCGGCCAGTAGAGGGCGGCGCGGCAGCGGCGACAGCAGCTGCGATCCTCCATCAGAGGGAGACCTGCAGGAGCGAAGCTGACAAGAGGCAGAGGTCGCCTCCCATGGATTCTCTCCATCTCGTGCACGTCAAGCTCCTGGCTGCCGATCTCCTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTCGCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAA GGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCAT GGCCAA GGAATGTTACGATCTGCGGCCGCCTTCTGCTTGAGGCTCATCTCGGAGGAAGTTCGTGCAATGTAATGTTCAGAATATGTTTGATGTTTCTTTGTGGAATTGCTGAAGATTTGAACTGTGAGACAATCCTGTAATGCATGTGACAAGCTCTGTTGTTATTTGCAGAGACTTTTGGGTTCATTCTGTTGGATTTACCCCATTAAGCATCAGGGTTGTTCACTTGTTTGTGTCTAGTTTATTTATATCTAAATACAGAGGCTCCTAGTGACAGGAGATTGC]
[+] EMBL C93681               [                              GCGGGCGGCGGTGGCGGCGGGCCTTCAGTACGGCTCCTCCCGTCGGTAGCTCC GCCCATTCTCGACGTGCGCCTCCCCGGCGACGCGGCGAGGCCTCCCGTCACCTCGAACCCCTGTCTAAGCCTAGGGCGGCGGCGATCGCGGCCAGTAGAGGGCGGCGCGGCAG GGCGACA NAGCTGCGATCCTCCATCAGAGGGAGACCTGCAGGAGCGAAG TGACAAGAGGCAGAGGTCGCCTCCCATGGATTCTCTCCATCTCGTGCACGTCAAGCTCCTGGCTGCCGATCTNCTCTCCCTGGCCTTCCGCCACAACTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU163691             [                                                            gGGCTCCTCCNGTCGGTAGCTCCGGCCCATTCTCGACGTGCGCNTCCCCGGCGACGCGGCGAGGCCTCCCGTCACCTCGAACCCCTGTCTAAG CTAGGNCGNCGGCGATCGCGGCCAGTAGAGGGCGGCGCGGCAGCGGCGACAGCAGCTGCGATCCTCCATCAGAGGGAGACCTGCAGGAGCGAAGCTGACAAGAGGCAGAGGTCGCCTCCCATGGATTCTCTCCATCTCGTGCACGTCAAGCTCCTGGCTGCCGATCTCCTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTCGCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAA GGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCAT GGCCAA GGAAT                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU070919             [                                                                                                                                                                                                                                                                                                                            GATCTCCTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTCGCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAAGGGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCATGGGCCAAGGGAAT                                                                                                                                                                                                                                                                                  ]
[-] EMBL AU070990             [                                                                                                                                                                                                                                                                                                                                  CTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTCGCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAA GGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCAT GGCCAA GGAATGTTACGA                                                                                                                                                                                                                                                                           ]
[+] EMBL AU095585             [                                                                                                                                                                                                                                                                                                                                                                                                     CCGAGATCGTCGGCGTCGTGGTTTCCCGTGATCCGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTGCTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCTGATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTGAGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTTGTTCTGGAGAA GGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCAT GGCCAA GGAATGTTACG                                                                                                                                                                                                                                                                            ]




>consensus_9487#0
CGCTCGTCTTCTCCATCGGCGGCGGCGGCGGCGGGCGGCGGTGGCGGCGGGCCTTCAGTA
CGGCTCCTCCCGTCGGTAGCTCCGCCCATTCTCGACGTGCGCCTCCCCGGCGACGCGGCG
AGGCCTCCCGTCACCTCGAACCCCTGTCTAAGCCTAGGGCGGCGGCGATCGCGGCCAGTA
GAGGGCGGCGCGGCAGCGGCGACAGCAGCTGCGATCCTCCATCAGAGGGAGACCTGCAGG
AGCGAAGCTGACAAGAGGCAGAGGTCGCCTCCCATGGATTCTCTCCATCTCGTGCACGTC
AAGCTCCTGGCTGCCGATCTCCTCTCCCTGGCCTCCCGCCACACCTCGCCGCCTTCGTTC
GCTCGCTGCGGCCGTACGGTTACTCGTGCCGAGATCGTCGGCGTCGTGGTTTCCCGTGAT
CGCAGGGAGAAGTTCCTCCGGTTTCTGGTGGACGATGGCACCGGATGCGTGCCGTGCGTG
CTGTGGCTGAACCACCACTACCTGAATGCTGCGAGCAGTTCATCCAGGGCATCAGATTCT
GATCCAACTGCAGAGATGGCGTTGAGGATGTCAGAGGTGGTGAGCCTGGGCACTCTGTTG
AGGGTTCGAGGCAGGATTGTATTGTACCGTGGTGCGATCCAGATTGCTGTTAGAGATGTT
GTTCTGGAGAAGGACCCTAATGTGGAGGTGATGCATTGGTTGCAATGTATTCGCATGGCC
AAGGAATGTTACGATCTGCGGCCGCCTTCTGCTTGAGGCTCATCTCGGAGGAAGTTCGTG
CAATGTAATGTTCAGAATATGTTTGATGTTTCTTTGTGGAATTGCTGAAGATTTGAACTG
TGAGACAATCCTGTAATGCATGTGACAAGCTCTGTTGTTATTTGCAGAGACTTTTGGGTT
CATTCTGTTGGATTTACCCCATTAAGCATCAGGGTTGTTCACTTGTTTGTGTCTAGTTTA
TTTATATCTAAATACAGAGGCTCCTAGTGACAGGAGATTGC
clustalw multiple alignements is not computed in this case