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Oryza sativa
cluster # 9509 cluster # 9509       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9509#0 length = 1508 sequences # 4  
consensus_9509#1 length = 579 sequences # 1  
consensus_9509#2 length = 374 sequences # 1  

consensusID : consensus_9509#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1508
fasta sequence
                              [GTTCGCTCGATTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGAGATTGATTAAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAGCCGCACTGCTGCA-ACCACAGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCGGTTCGCCAAGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGCTGGTCTTGAGTCATCAAATC-TGATTGTTGGGATTGA-TTTCACCAAGTCCAATGAATGGAC-AGGCAGAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATGTCTCAAACCCATATGAGCAAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCATGCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACAACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAACTACGTTTGGCTGGCCCCACTTCA-TTTGCACCGATG-ATTGAGACAGCTATTGGAATTGTGGATAGTA-GTGGTGGCCAGTATCATGTCCTACTTATAATTGCAGATGGACAGGTTACACGCAGTGTTGACACAGGTAATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGATGCCATTGTGAAAGCCAGTGACTACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGGGCCATGGGATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTGTGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTCTTTCAGCATTGATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTTATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCATTTGTGAAATGAATGTTCCT]

[+] EMBL AK066150             [GTTCGCTCGATTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGAGATTGATTAAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAGCCGCACTGCTGCA ACCACAGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCGGTTCGCCAAGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGCTGGTCTTGAGTCATCAAATC TGATTGTTGGGATTGA TTTCACCAAGTCCAATGAATGGAC AGGCAGAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATGTCTCAAACCCATATGAGCAAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCATGCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACAACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAACTACGTTTGGCTGGCCCCACTTCA TTTGCACCGATG ATTGAGACAGCTATTGGAATTGTGGATAGTA GTGGTGGCCAGTATCATGTCCTACTTATAATTGCAGATGGACAGGTTACACGCAGTGTTGACACAGGTAATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGATGCCATTGTGAAAGCCAGTGACTACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGGGCCATGGGATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTGTGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTCTTTCAGCATTGATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTTATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCATTTGTGAAATGAATGTTCCT]
[+] EMBL C26516               [    cggantnTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGAGATTGATTAAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAG CGCACTGCT CAGACCACAGCAGCAGCAGCAATGCCGCGCCGAA GGGAACAATCGGTTCGCCAAGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGTTGGTCTTGAGTCATCAAATCTTAATTGTTGGGATTGATTTTAACCAAGTCCAATGAATNGNCAAGGCAGAGTTTCCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C26110               [                                                                                                                                                                                                                                                                          AGAGCAGGTAACTGATGCTCTTGCACACGCTGGTCTTGAGTCATCAAATC TGATTGTTGGGATTGA TTTCACCAAGTCCAATGAATGGAC AGGCAGAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATATCTCAAACCCATATGAGCAAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCATGCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACAACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAACTACGGTTGGCTGGCCCCACTTCATTTTGCACCGATGNATTGAGACAGCTATTGGGATTGTGGGTAGTAGGTNGTGGCCAGTATCATGTCCTACTTAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU081504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTCAATTGTGCTTGTTGGAGTTGGCGATGGCCCATGGGATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTGTGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTCTTTCAGCATTGATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTTATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCAaaaa                ]


>consensus_9509#0 GTTCGCTCGATTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGGATTTGCGT GCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGAGATTGATT AAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAGCCGC ACTGCTGCAACCACAGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCGGTTCGCCA AGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGCTGGTC TTGAGTCATCAAATCTGATTGTTGGGATTGATTTCACCAAGTCCAATGAATGGACAGGCA GAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATGTCTCAAACCCATATGAGC AAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCAT GCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACA ACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAAC TACGTTTGGCTGGCCCCACTTCATTTGCACCGATGATTGAGACAGCTATTGGAATTGTGG ATAGTAGTGGTGGCCAGTATCATGTCCTACTTATAATTGCAGATGGACAGGTTACACGCA GTGTTGACACAGGTAATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGATGCCATTG TGAAAGCCAGTGACTACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGGGCCATGGG ATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTG TGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTG CTCTTTCAGCATTGATGGAGATCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTC TTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCC AACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGC AGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCT GCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCG GGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCT ACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTT CCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTT ATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCATTTGTGAAATGA ATGTTCCT



consensusID : consensus_9509#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 579
fasta sequence
                              [GAACTTCACAGAGANCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTNTTTCAGCATTGATGGAGATCCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTTATAGAATACTCATGGTATTCAAACTAAAAAAAAAAAAAA]

[+] EMBL AU108204             [GAACTTCACAGAGANCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGCTNTTTCAGCATTGATGGAGATCCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGCAGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTTATAGAATACTCATGGTATTCAAACTAAAAAAAAAAAAAA]


>consensus_9509#1 GAACTTCACAGAGANCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTGC TNTTTCAGCATTGATGGAGATCCCCAGAACAGTTCAAGGCAGCAATAAACCTCCAACTTC TTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATTTCC AACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGCTGC AGAAAAAGACATCAGCACCTAAACAGGATAGTGACATAGGTGATCAGACTTGTCCAATCT GCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGGACTGCG GGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTAGGCTCT ACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTTTTTGTT CCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATCAGTGTT ATAGAATACTCATGGTATTCAAACTAAAAAAAAAAAAAA



consensusID : consensus_9509#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 374
fasta sequence
                              [TCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATGTAGGTTCGCCTAACAAATCCGGGAGTTCTTTTGATTCGTCGTGGTTTTTATTATGTTTATTATCTCTATACGCTCTTATTTTTCGGCAATCGGTTGCTCTCCTCCCCCCAAATTCTCATCTTCAGTTCTTGCGAGGGCTTTTTTTTCTTTCCAGATTGTGGTGGGCGACTCTGTTAAACCCTATCTCTCTTTCTTCTTGAGCGGAATCGAGAGATTGCTGATTTTTTCTTGTTGATTTGTTCTGCAGCGAGTGGAGAGAGGGGANGGAAGAGATTGATTAAGAGGAGGAAGACATGGGGGCGTCTGCTCCAAGCAGA]

[+] EMBL C72946               [TCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATGTAGGTTCGCCTAACAAATCCGGGAGTTCTTTTGATTCGTCGTGGTTTTTATTATGTTTATTATCTCTATACGCTCTTATTTTTCGGCAATCGGTTGCTCTCCTCCCCCCAAATTCTCATCTTCAGTTCTTGCGAGGGCTTTTTTTTCTTTCCAGATTGTGGTGGGCGACTCTGTTAAACCCTATCTCTCTTTCTTCTTGAGCGGAATCGAGAGATTGCTGATTTTTTCTTGTTGATTTGTTCTGCAGCGAGTGGAGAGAGGGGANGGAAGAGATTGATTAAGAGGAGGAAGACATGGGGGCGTCTGCTCCAAGCAGA]


>consensus_9509#2 TCACCACGCCACGCCAACGGATTTGCGTGCTTCCCCGCGAAGGATTTCCGCGCAATGTAG GTTCGCCTAACAAATCCGGGAGTTCTTTTGATTCGTCGTGGTTTTTATTATGTTTATTAT CTCTATACGCTCTTATTTTTCGGCAATCGGTTGCTCTCCTCCCCCCAAATTCTCATCTTC AGTTCTTGCGAGGGCTTTTTTTTCTTTCCAGATTGTGGTGGGCGACTCTGTTAAACCCTA TCTCTCTTTCTTCTTGAGCGGAATCGAGAGATTGCTGATTTTTTCTTGTTGATTTGTTCT GCAGCGAGTGGAGAGAGGGGANGGAAGAGATTGATTAAGAGGAGGAAGACATGGGGGCGT CTGCTCCAAGCAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9509#0      GTTCGCTCGATTCCGGGTTCTTGATTTCGTCCTCACCACGCCACGCCAACGGATTTGCGT 60
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      GCTTCCCCGCGAAGGATTTCCGCGCAATCGAGTGGAGAGAGGGGAGGGAAGAGATTGATT 120
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      AAGAGGAGGAGGACATGGGGGCGTTCTGCTCCAAGCAGAATCCGTCGGGGCAGCAGCCGC 180
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      ACTGCTGCAACCACAGCAGCAGCAGCAATGCCGCGCCGAAGGGGAACAATCGGTTCGCCA 240
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      AGTTCGGCGATGATTACCATACCCTAGAGCAGGTAACTGATGCTCTTGCACACGCTGGTC 300
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      TTGAGTCATCAAATCTGATTGTTGGGATTGATTTCACCAAGTCCAATGAATGGACAGGCA 360
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      GAGTTTCCTTCAACAACCAGAGCCTGCATTCTCTGGGCCATGTCTCAAACCCATATGAGC 420
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      AAGCCATATCTATCATAGGGCAAACTCTTTCACGATTTGATGAGGACAACCTGATACCAT 480
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      GCTATGGATTTGGTGATGCTACTACACATGACCAGAAGGTATTTAGCTTCTATCCTGACA 540
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      ACAAACCATGTGATGGTTTTGAACAAGCACTTGATCGGTACAGAGAAATTGTTCCACAAC 600
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      TACGTTTGGCTGGCCCCACTTCATTTGCACCGATGATTGAGACAGCTATTGGAATTGTGG 660
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      ATAGTAGTGGTGGCCAGTATCATGTCCTACTTATAATTGCAGATGGACAGGTTACACGCA 720
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      GTGTTGACACAGGTAATGGGCAGCTGAGCCCTCAGGAAAGGGAGACTATAGATGCCATTG 780
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      TGAAAGCCAGTGACTACCCTTTGTCAATTGTGCTTGTTGGAGTTGGCGATGGGCCATGGG 840
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      ATATGATGAGGCAATTCGATGACAACATCCCTTCTCGTGCGTTCGACAACTTCCAGTTTG 900
consensus_9509#1      ------------------------------------------------------------
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      TGAACTTCACAGAGATCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTG 960
consensus_9509#1      -GAACTTCACAGAGANCATGTCAAGACCTGTTCCTGCCAGCAAAAAGGAGGCAGAATTTG 59
consensus_9509#2      ---------------------------------TCACCA-CGCCACGCCAAC-GGATTTG 25
                                                          *** *   * *    * * *****

consensus_9509#0      CTCTTTCAGCATTGATGGAGATCCC-AGAACAGTTCAAGGCAGC--AATAAACCTCCAAC 1017
consensus_9509#1      CTNTTTCAGCATTGATGGAGATCCCCAGAACAGTTCAAGGCAGC--AATAAACCTCCAAC 117
consensus_9509#2      CGTGCTTCCCCGCGAAGGATTTCC---GCGCAATGTAGGTTCGCCTAACAAATCCGGGAG 82
                      *    *   *   ** ***  ***   *  ** *  * *   **  ** *** *    * 

consensus_9509#0      TTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATT 1077
consensus_9509#1      TTCTTGGAAAACGTCGAGGATTTCCACATCGAACAGTGTTACCTCCACCTGTGAGGGATT 177
consensus_9509#2      TTCTTTTGATTCGTCGTGGTTTTTATTATGT----TTATTATCTCTATACGCTCTTATTT 138
                      *****   *  ***** ** ***    **       * *** *** *   *       **

consensus_9509#0      TCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGC 1137
consensus_9509#1      TCCAACAATACTATGGGTGCTCAACAGTCAAAGAAACGCAATCTACTAGCTATGGGTCGC 237
consensus_9509#2      TTCGGCAAT----CGGTTGCTCTCCTCCC-------CCCAAATTCTCATCT-TCAGTTCT 186
                      * *  ****     ** *****  *   *       * ***  *   * ** *  **   

consensus_9509#0      TGCAGAAAAAGACATCAGCACCTAAACAG--GATAGTGACATAGGTGA-TCAGACTTGTC 1194
consensus_9509#1      TGCAGAAAAAGACATCAGCACCTAAACAG--GATAGTGACATAGGTGA-TCAGACTTGTC 294
consensus_9509#2      TGCGAGGGCTTTTTTTTCTTTCCAGATTGTGGTGGGCGACTCTGTTAAACCCTATCTCTC 246
                      ***           *      * * *  *  *   * ***   * * *  *  *  * **

consensus_9509#0      CAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGG 1254
consensus_9509#1      CAATCTGCTGGTTGGAAGCAAAGAACCTTGCTTTTGGATGTGGGCATCAGACGTGCTCGG 354
consensus_9509#2      TTTCTTCTTGAGCGGAATCGAGAGATTGCTGATTTTTTCTTGTTGATTTGTTCTGCAGCG 306
                           *  **   **** * *   *       ***     **   **  *   ***   *

consensus_9509#0      ACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTA 1314
consensus_9509#1      ACTGCGGGAAGGATCTGAAGGTTTGCCCCATTTGCCAGAGGGAAATCTCCACAAGAATTA 414
consensus_9509#2      AGTGGAGAGAGGGGANGGAAG--AGATTGATTAAGAGGAGGAAGACAT--GGGGGCGTCT 362
                      * **  *  ***    * * *   *    ***     **** * *  *      *  *  

consensus_9509#0      GGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTT 1374
consensus_9509#1      GGCTCTACTGAAGTTGAGAATCTATACGCAATTGGCACTTTTTAGCATACACTTACACTT 474
consensus_9509#2      GCTCCAAGCAGA------------------------------------------------ 374
                      *   * *    *                                                

consensus_9509#0      TTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATC 1434
consensus_9509#1      TTTGTTCCTTATGATTTAAGATTTTGCAAGAGGGAGCACTAGCTGTAAATACAGTTTATC 534
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      AGTGTTATAGAATACTCATGGTATTCAAACTAGTACTGGTCATTTTGGATAGCATTTGTG 1494
consensus_9509#1      AGTGTTATAGAATACTCATGGTATTCAAACTAAAAAAAAAAAAAA--------------- 579
consensus_9509#2      ------------------------------------------------------------
                                                                                  

consensus_9509#0      AAATGAATGTTCCT 1508
consensus_9509#1      --------------
consensus_9509#2      --------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)